Gene annotation
Transcriptome id Sobic.003G053700.2,Sobic.003G053700.1
Synonym Sb03g004640
Functional annotation growth regulator related protein, putative, expressed
UniProt A0A1W0VVR9 , A0A1B6Q1F5
Pfam PF10250
Panther DB PTHR31741 PTHR31741:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14020 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os01g07410.1 : growth regulator related protein, putative, expressed
MaizeGDB (Corn) Zm00025a023292 , Zm00025a035706 , Zm00025a042742
Brachypodium PNT70008 , KQK02872 , KQK02873
Barley HORVU3Hr1G017120.10 , HORVU3Hr1G017120.11 , HORVU3Hr1G017120.6 , HORVU3Hr1G017120.7 , HORVU3Hr1G017120.4 , HORVU3Hr1G017120.5 , HORVU3Hr1G017120.2 , HORVU3Hr1G017120.3 , HORVU3Hr1G017120.1 , HORVU3Hr1G017120.8 , HORVU3Hr1G017120.9
Wheat TraesCS3D02G095400 , TraesCS3A02G095200 , TraesCS3A02G095200 , TraesCS3B02G110800 , TraesCS3B02G110800
Populus -


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cDNA sequences
Sobic.003G053700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G125900 expressed protein -
2 Sobic.002G342500 glycosyltransferase sugar-binding region containing DXD motif, putative, expressed -
3 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -
4 Sobic.001G222400 tetratricopeptide repeat domain containing protein, expressed -
5 Sobic.003G348800 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
6 Sobic.010G090500 expressed protein -
7 Sobic.004G265600 tetratricopeptide repeat domain containing protein, expressed -
8 Sobic.003G254700 glycosyltransferase family 43 protein, putative, expressed -
9 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
10 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
11 Sobic.007G211600 expressed protein -
12 Sobic.010G120300 tm-1GCR237 protein, putative, expressed -
13 Sobic.008G174900 IQ calmodulin-binding motif domain containing protein, expressed -
14 Sobic.001G313301 - -
15 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
16 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
17 Sobic.009G151700 protein of unknown function DUF502 domain containing protein, expressed -
18 Sobic.008G150300 Lg106, putative, expressed -
19 Sobic.004G051300 galactosyltransferase, putative, expressed -
20 Sobic.001G159800 KIP1, putative, expressed -


Gene co-expression network
sample Sobic003G053700 Sobic003G053700 Sobic009G125900 Sobic009G125900 Sobic003G053700--Sobic009G125900 Sobic002G342500 Sobic002G342500 Sobic003G053700--Sobic002G342500 Sobic009G246700 Sobic009G246700 Sobic003G053700--Sobic009G246700 Sobic001G222400 Sobic001G222400 Sobic003G053700--Sobic001G222400 Sobic003G348800 Sobic003G348800 Sobic003G053700--Sobic003G348800 Sobic010G090500 Sobic010G090500 Sobic003G053700--Sobic010G090500 Sobic004G265600 Sobic004G265600 Sobic003G053700--Sobic004G265600 Sobic003G254700 Sobic003G254700 Sobic003G053700--Sobic003G254700 Sobic001G281900 Sobic001G281900 Sobic003G053700--Sobic001G281900 Sobic009G063400 Sobic009G063400 Sobic009G125900--Sobic009G063400 Sobic009G026101 Sobic009G026101 Sobic009G125900--Sobic009G026101 Sobic002G075500 Sobic002G075500 Sobic009G125900--Sobic002G075500 Sobic002G118700 Sobic002G118700 Sobic009G125900--Sobic002G118700 Sobic009G125900--Sobic010G090500 Sobic009G125900--Sobic004G265600 Sobic010G096100 Sobic010G096100 Sobic009G125900--Sobic010G096100 Sobic004G051300 Sobic004G051300 Sobic009G125900--Sobic004G051300 Sobic009G125900--Sobic003G254700 Sobic001G338400 Sobic001G338400 Sobic002G342500--Sobic001G338400 Sobic005G074100 Sobic005G074100 Sobic002G342500--Sobic005G074100 Sobic001G145500 Sobic001G145500 Sobic002G342500--Sobic001G145500 Sobic002G342500--Sobic003G348800 Sobic001G322000 Sobic001G322000 Sobic002G342500--Sobic001G322000 Sobic006G179700 Sobic006G179700 Sobic002G342500--Sobic006G179700 Sobic007G013300 Sobic007G013300 Sobic002G342500--Sobic007G013300 Sobic007G161200 Sobic007G161200 Sobic002G342500--Sobic007G161200 Sobic002G342500--Sobic003G053700 Sobic001G133900 Sobic001G133900 Sobic009G246700--Sobic001G133900 Sobic009G246700--Sobic009G026101 Sobic001G406700 Sobic001G406700 Sobic009G246700--Sobic001G406700 Sobic007G119500 Sobic007G119500 Sobic009G246700--Sobic007G119500 Sobic001G072600 Sobic001G072600 Sobic009G246700--Sobic001G072600 Sobic002G167600 Sobic002G167600 Sobic009G246700--Sobic002G167600 Sobic001G360700 Sobic001G360700 Sobic009G246700--Sobic001G360700 Sobic001G460400 Sobic001G460400 Sobic009G246700--Sobic001G460400 Sobic006G144600 Sobic006G144600 Sobic009G246700--Sobic006G144600 Sobic010G138500 Sobic010G138500 Sobic001G222400--Sobic010G138500 Sobic001G222400--Sobic003G053700 Sobic009G017500 Sobic009G017500 Sobic001G222400--Sobic009G017500 Sobic001G073150 Sobic001G073150 Sobic001G222400--Sobic001G073150 Sobic006G177300 Sobic006G177300 Sobic001G222400--Sobic006G177300 Sobic004G124100 Sobic004G124100 Sobic001G222400--Sobic004G124100 Sobic002G333100 Sobic002G333100 Sobic001G222400--Sobic002G333100 Sobic010G120300 Sobic010G120300 Sobic001G222400--Sobic010G120300 Sobic001G222400--Sobic009G125900 Sobic003G348800--Sobic001G338400 Sobic003G348800--Sobic001G281900 Sobic003G348800--Sobic002G342500 Sobic001G230100 Sobic001G230100 Sobic003G348800--Sobic001G230100 Sobic001G220900 Sobic001G220900 Sobic003G348800--Sobic001G220900 Sobic004G160200 Sobic004G160200 Sobic003G348800--Sobic004G160200 Sobic001G109300 Sobic001G109300 Sobic003G348800--Sobic001G109300 Sobic004G257000 Sobic004G257000 Sobic003G348800--Sobic004G257000 Sobic008G150300 Sobic008G150300 Sobic003G348800--Sobic008G150300 Sobic001G159800 Sobic001G159800 Sobic010G090500--Sobic001G159800 Sobic010G090500--Sobic010G120300 Sobic009G206500 Sobic009G206500 Sobic010G090500--Sobic009G206500 Sobic009G079100 Sobic009G079100 Sobic010G090500--Sobic009G079100 Sobic001G437500 Sobic001G437500 Sobic010G090500--Sobic001G437500 Sobic006G267500 Sobic006G267500 Sobic010G090500--Sobic006G267500 Sobic010G090500--Sobic001G073150 Sobic009G061000 Sobic009G061000 Sobic010G090500--Sobic009G061000 Sobic010G090500--Sobic009G125900 Sobic004G265600--Sobic009G125900 Sobic001G116000 Sobic001G116000 Sobic004G265600--Sobic001G116000 Sobic004G265600--Sobic009G063400 Sobic004G265600--Sobic009G026101 Sobic004G203900 Sobic004G203900 Sobic004G265600--Sobic004G203900 Sobic004G265600--Sobic002G075500 Sobic004G265600--Sobic003G254700 Sobic004G265600--Sobic010G090500 Sobic008G174900 Sobic008G174900 Sobic004G265600--Sobic008G174900 Sobic004G111100 Sobic004G111100 Sobic003G254700--Sobic004G111100 Sobic004G007600 Sobic004G007600 Sobic003G254700--Sobic004G007600 Sobic003G254700--Sobic001G133900 Sobic003G254700--Sobic009G026101 Sobic003G254700--Sobic001G072600 Sobic003G254700--Sobic009G246700 Sobic003G254700--Sobic009G125900 Sobic003G254700--Sobic002G075500 Sobic002G218900 Sobic002G218900 Sobic003G254700--Sobic002G218900 Sobic003G330500 Sobic003G330500 Sobic001G281900--Sobic003G330500 Sobic005G105500 Sobic005G105500 Sobic001G281900--Sobic005G105500 Sobic001G281900--Sobic008G150300 Sobic006G252200 Sobic006G252200 Sobic001G281900--Sobic006G252200 Sobic001G196100 Sobic001G196100 Sobic001G281900--Sobic001G196100 Sobic001G458700 Sobic001G458700 Sobic001G281900--Sobic001G458700 Sobic007G176200 Sobic007G176200 Sobic001G281900--Sobic007G176200 Sobic001G281900--Sobic001G338400 Sobic001G096100 Sobic001G096100 Sobic001G281900--Sobic001G096100
Octagon: transcription factors


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