Gene annotation
Transcriptome id Sobic.007G211600.1
Synonym Sb07g027880
Functional annotation expressed protein
UniProt C5YIT8
Pfam PF01843
Panther DB PTHR31344 PTHR31344:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42320 : nucleolar protein gar2-related
RAP-DB (Rice) LOC_Os08g39490.2 : expressed protein
MaizeGDB (Corn) Zm00025a002569 , Zm00025a005073 , Zm00025a047438 , Zm00025a040970 , Zm00025a000836
Brachypodium KQJ98902 , KQJ90739 , KQJ90740
Barley HORVU7Hr1G050160.7 , HORVU7Hr1G050160.6 , HORVU7Hr1G050160.5 , HORVU7Hr1G050160.4 , HORVU7Hr1G050160.3 , HORVU7Hr1G050160.2 , HORVU7Hr1G050160.1 , HORVU7Hr1G050160.10 , HORVU5Hr1G073010.8 , HORVU5Hr1G073010.9 , HORVU5Hr1G073010.6 , HORVU5Hr1G073010.7 , HORVU5Hr1G073010.4 , HORVU5Hr1G073010.5 , HORVU5Hr1G073010.2 , HORVU5Hr1G073010.3 , HORVU5Hr1G073010.1 , HORVU5Hr1G073010.10 , HORVU5Hr1G073010.11 , HORVU5Hr1G073010.12
Wheat TraesCS5B02G263200 , TraesCS5D02G271600 , TraesCS7A02G244700 , TraesCS5A02G264000 , TraesCS7B02G146700 , TraesCS5A02G264000 , TraesCS7D02G243400
Populus -


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cDNA sequences
Sobic.007G211600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G079100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
2 Sobic.009G026101 - -
3 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
4 Sobic.010G090500 expressed protein -
5 Sobic.007G119500 expressed protein -
6 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -
7 Sobic.004G051300 galactosyltransferase, putative, expressed -
8 Sobic.001G072600 expressed protein -
9 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
10 Sobic.003G053700 growth regulator related protein, putative, expressed -
11 Sobic.003G198500 XIK, putative, expressed K10357: myosin V
12 Sobic.009G125900 expressed protein -
13 Sobic.002G075500 CESA8 - cellulose synthase, expressed K10999: cellulose synthase A
14 Sobic.003G378800 amino acid transporter, putative, expressed -
15 Sobic.010G022400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
16 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
17 Sobic.003G366300 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
18 Sobic.001G183600 galactosyltransferase, putative, expressed -
19 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
20 Sobic.010G180100 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic007G211600 Sobic007G211600 Sobic009G079100 Sobic009G079100 Sobic007G211600--Sobic009G079100 Sobic009G026101 Sobic009G026101 Sobic007G211600--Sobic009G026101 Sobic002G118700 Sobic002G118700 Sobic007G211600--Sobic002G118700 Sobic010G090500 Sobic010G090500 Sobic007G211600--Sobic010G090500 Sobic007G119500 Sobic007G119500 Sobic007G211600--Sobic007G119500 Sobic009G246700 Sobic009G246700 Sobic007G211600--Sobic009G246700 Sobic004G051300 Sobic004G051300 Sobic007G211600--Sobic004G051300 Sobic001G072600 Sobic001G072600 Sobic007G211600--Sobic001G072600 Sobic009G063400 Sobic009G063400 Sobic007G211600--Sobic009G063400 Sobic009G079100--Sobic010G090500 Sobic003G198500 Sobic003G198500 Sobic009G079100--Sobic003G198500 Sobic009G079100--Sobic009G026101 Sobic009G079100--Sobic004G051300 Sobic007G040301 Sobic007G040301 Sobic009G079100--Sobic007G040301 Sobic009G079100--Sobic007G211600 Sobic001G133900 Sobic001G133900 Sobic009G079100--Sobic001G133900 Sobic009G079100--Sobic009G246700 Sobic009G206500 Sobic009G206500 Sobic009G079100--Sobic009G206500 Sobic009G026101--Sobic001G133900 Sobic009G026101--Sobic009G063400 Sobic009G125900 Sobic009G125900 Sobic009G026101--Sobic009G125900 Sobic009G026101--Sobic009G246700 Sobic009G026101--Sobic009G206500 Sobic002G075500 Sobic002G075500 Sobic009G026101--Sobic002G075500 Sobic006G075000 Sobic006G075000 Sobic009G026101--Sobic006G075000 Sobic003G254700 Sobic003G254700 Sobic009G026101--Sobic003G254700 Sobic010G096100 Sobic010G096100 Sobic009G026101--Sobic010G096100 Sobic002G118700--Sobic009G063400 Sobic002G118700--Sobic009G125900 Sobic002G118700--Sobic002G075500 Sobic001G099100 Sobic001G099100 Sobic002G118700--Sobic001G099100 Sobic002G118700--Sobic004G051300 Sobic002G118700--Sobic009G026101 Sobic002G118700--Sobic010G090500 Sobic007G180900 Sobic007G180900 Sobic002G118700--Sobic007G180900 Sobic002G276600 Sobic002G276600 Sobic002G118700--Sobic002G276600 Sobic001G159800 Sobic001G159800 Sobic010G090500--Sobic001G159800 Sobic010G120300 Sobic010G120300 Sobic010G090500--Sobic010G120300 Sobic010G090500--Sobic009G206500 Sobic010G090500--Sobic009G079100 Sobic001G437500 Sobic001G437500 Sobic010G090500--Sobic001G437500 Sobic006G267500 Sobic006G267500 Sobic010G090500--Sobic006G267500 Sobic001G073150 Sobic001G073150 Sobic010G090500--Sobic001G073150 Sobic009G061000 Sobic009G061000 Sobic010G090500--Sobic009G061000 Sobic010G090500--Sobic009G125900 Sobic009G170500 Sobic009G170500 Sobic007G119500--Sobic009G170500 Sobic003G270400 Sobic003G270400 Sobic007G119500--Sobic003G270400 Sobic004G047600 Sobic004G047600 Sobic007G119500--Sobic004G047600 Sobic007G119500--Sobic001G072600 Sobic002G167600 Sobic002G167600 Sobic007G119500--Sobic002G167600 Sobic003G378800 Sobic003G378800 Sobic007G119500--Sobic003G378800 Sobic001G360700 Sobic001G360700 Sobic007G119500--Sobic001G360700 Sobic006G144600 Sobic006G144600 Sobic007G119500--Sobic006G144600 Sobic001G406700 Sobic001G406700 Sobic007G119500--Sobic001G406700 Sobic009G246700--Sobic001G133900 Sobic009G246700--Sobic009G026101 Sobic009G246700--Sobic001G406700 Sobic009G246700--Sobic007G119500 Sobic009G246700--Sobic001G072600 Sobic009G246700--Sobic002G167600 Sobic009G246700--Sobic001G360700 Sobic001G460400 Sobic001G460400 Sobic009G246700--Sobic001G460400 Sobic009G246700--Sobic006G144600 Sobic004G051300--Sobic001G099100 Sobic004G051300--Sobic002G118700 Sobic004G051300--Sobic009G125900 Sobic004G051300--Sobic002G075500 Sobic004G051300--Sobic009G026101 Sobic004G051300--Sobic002G276600 Sobic004G051300--Sobic009G079100 Sobic004G051300--Sobic010G090500 Sobic004G051300--Sobic009G063400 Sobic001G072600--Sobic002G167600 Sobic002G218900 Sobic002G218900 Sobic001G072600--Sobic002G218900 Sobic001G072600--Sobic007G119500 Sobic001G072600--Sobic001G360700 Sobic001G072600--Sobic004G047600 Sobic001G072600--Sobic006G144600 Sobic001G072600--Sobic009G246700 Sobic007G047300 Sobic007G047300 Sobic001G072600--Sobic007G047300 Sobic001G072600--Sobic009G170500 Sobic009G063400--Sobic009G125900 Sobic009G063400--Sobic002G075500 Sobic009G063400--Sobic009G026101 Sobic009G063400--Sobic002G118700 Sobic009G063400--Sobic010G096100 Sobic001G334900 Sobic001G334900 Sobic009G063400--Sobic001G334900 Sobic009G063400--Sobic010G090500 Sobic001G208600 Sobic001G208600 Sobic009G063400--Sobic001G208600 Sobic009G063400--Sobic006G075000
Octagon: transcription factors


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