Gene annotation
Transcriptome id Sobic.001G099100.1
Synonym DEC, GH9A1, TSD1, ATGH9A1, RSW2, KOR1, IRX2, Sb01g008860, KOR
Functional annotation endoglucanase, putative, expressed
UniProt C5X1C8
Pfam PF00759
Panther DB PTHR22298 PTHR22298:SF50
NCBI CDD -
KEGG Orthology K01179; endoglucanase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G49720 : glycosyl hydrolase 9A1
RAP-DB (Rice) LOC_Os03g52630.1 : endoglucanase, putative, expressed
MaizeGDB (Corn) Zm00025a010575 , Zm00025a008042 , Zm00025a002305 , Zm00025a016861
Brachypodium KQJ83374 , KQK13338
Barley HORVU4Hr1G011160.9 , HORVU4Hr1G011160.8 , HORVU4Hr1G011160.3 , HORVU4Hr1G011160.2 , HORVU4Hr1G011160.1 , HORVU4Hr1G011160.7 , HORVU4Hr1G011160.6 , HORVU4Hr1G011160.5 , HORVU4Hr1G011160.4 , HORVU2Hr1G085800.3 , HORVU2Hr1G085800.2 , HORVU2Hr1G085800.5 , HORVU2Hr1G085800.4
Wheat TraesCS4D02G065600 , TraesCS2D02G351300 , TraesCS2D02G351300 , TraesCS4A02G248200 , TraesCS2A02G352800 , TraesCS2A02G352800 , TraesCS2B02G370600 , TraesCS4B02G066700 , TraesCS4B02G066700
Populus -


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cDNA sequences
Sobic.001G099100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G051300 galactosyltransferase, putative, expressed -
2 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
3 Sobic.002G276600 endoglucanase, putative, expressed -
4 Sobic.002G075500 CESA8 - cellulose synthase, expressed K10999: cellulose synthase A
5 Sobic.010G090500 expressed protein -
6 Sobic.009G026101 - -
7 Sobic.009G125900 expressed protein -
8 Sobic.003G353400 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
9 Sobic.009G079100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
10 Sobic.010G050900 harpin-induced protein, putative, expressed -
11 Sobic.009G061000 DNA binding protein, putative, expressed -
12 Sobic.001G313301 - -
13 Sobic.001G133900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
14 Sobic.003G098500 - -
15 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
16 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.004G319600 polygalacturonase, putative, expressed -
18 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
19 Sobic.005G204700 polygalacturonase, putative, expressed -
20 Sobic.003G254700 glycosyltransferase family 43 protein, putative, expressed -


Gene co-expression network
sample Sobic001G099100 Sobic001G099100 Sobic004G051300 Sobic004G051300 Sobic001G099100--Sobic004G051300 Sobic002G118700 Sobic002G118700 Sobic001G099100--Sobic002G118700 Sobic002G276600 Sobic002G276600 Sobic001G099100--Sobic002G276600 Sobic002G075500 Sobic002G075500 Sobic001G099100--Sobic002G075500 Sobic010G090500 Sobic010G090500 Sobic001G099100--Sobic010G090500 Sobic009G026101 Sobic009G026101 Sobic001G099100--Sobic009G026101 Sobic009G125900 Sobic009G125900 Sobic001G099100--Sobic009G125900 Sobic003G353400 Sobic003G353400 Sobic001G099100--Sobic003G353400 Sobic009G079100 Sobic009G079100 Sobic001G099100--Sobic009G079100 Sobic004G051300--Sobic001G099100 Sobic004G051300--Sobic002G118700 Sobic004G051300--Sobic009G125900 Sobic004G051300--Sobic002G075500 Sobic004G051300--Sobic009G026101 Sobic004G051300--Sobic002G276600 Sobic004G051300--Sobic009G079100 Sobic004G051300--Sobic010G090500 Sobic009G063400 Sobic009G063400 Sobic004G051300--Sobic009G063400 Sobic002G118700--Sobic009G063400 Sobic002G118700--Sobic009G125900 Sobic002G118700--Sobic002G075500 Sobic002G118700--Sobic001G099100 Sobic002G118700--Sobic004G051300 Sobic002G118700--Sobic009G026101 Sobic002G118700--Sobic010G090500 Sobic007G180900 Sobic007G180900 Sobic002G118700--Sobic007G180900 Sobic002G118700--Sobic002G276600 Sobic009G061000 Sobic009G061000 Sobic002G276600--Sobic009G061000 Sobic001G437500 Sobic001G437500 Sobic002G276600--Sobic001G437500 Sobic002G276600--Sobic001G099100 Sobic008G174900 Sobic008G174900 Sobic002G276600--Sobic008G174900 Sobic006G267500 Sobic006G267500 Sobic002G276600--Sobic006G267500 Sobic004G243800 Sobic004G243800 Sobic002G276600--Sobic004G243800 Sobic002G276600--Sobic009G026101 Sobic002G276600--Sobic004G051300 Sobic002G276600--Sobic010G090500 Sobic002G075500--Sobic009G063400 Sobic002G075500--Sobic009G125900 Sobic002G075500--Sobic002G118700 Sobic002G075500--Sobic009G026101 Sobic002G075500--Sobic004G051300 Sobic002G075500--Sobic001G099100 Sobic002G075500--Sobic007G180900 Sobic003G254700 Sobic003G254700 Sobic002G075500--Sobic003G254700 Sobic006G156600 Sobic006G156600 Sobic002G075500--Sobic006G156600 Sobic001G159800 Sobic001G159800 Sobic010G090500--Sobic001G159800 Sobic010G120300 Sobic010G120300 Sobic010G090500--Sobic010G120300 Sobic009G206500 Sobic009G206500 Sobic010G090500--Sobic009G206500 Sobic010G090500--Sobic009G079100 Sobic010G090500--Sobic001G437500 Sobic010G090500--Sobic006G267500 Sobic001G073150 Sobic001G073150 Sobic010G090500--Sobic001G073150 Sobic010G090500--Sobic009G061000 Sobic010G090500--Sobic009G125900 Sobic001G133900 Sobic001G133900 Sobic009G026101--Sobic001G133900 Sobic009G026101--Sobic009G063400 Sobic009G026101--Sobic009G125900 Sobic009G246700 Sobic009G246700 Sobic009G026101--Sobic009G246700 Sobic009G026101--Sobic009G206500 Sobic009G026101--Sobic002G075500 Sobic006G075000 Sobic006G075000 Sobic009G026101--Sobic006G075000 Sobic009G026101--Sobic003G254700 Sobic010G096100 Sobic010G096100 Sobic009G026101--Sobic010G096100 Sobic009G125900--Sobic009G063400 Sobic009G125900--Sobic009G026101 Sobic009G125900--Sobic002G075500 Sobic009G125900--Sobic002G118700 Sobic009G125900--Sobic010G090500 Sobic004G265600 Sobic004G265600 Sobic009G125900--Sobic004G265600 Sobic009G125900--Sobic010G096100 Sobic009G125900--Sobic004G051300 Sobic009G125900--Sobic003G254700 Sobic004G337900 Sobic004G337900 Sobic003G353400--Sobic004G337900 Sobic003G353400--Sobic001G099100 Sobic007G225300 Sobic007G225300 Sobic003G353400--Sobic007G225300 Sobic006G242100 Sobic006G242100 Sobic003G353400--Sobic006G242100 Sobic009G030200 Sobic009G030200 Sobic003G353400--Sobic009G030200 Sobic007G178200 Sobic007G178200 Sobic003G353400--Sobic007G178200 Sobic003G319000 Sobic003G319000 Sobic003G353400--Sobic003G319000 Sobic010G050900 Sobic010G050900 Sobic003G353400--Sobic010G050900 Sobic003G312400 Sobic003G312400 Sobic003G353400--Sobic003G312400 Sobic009G079100--Sobic010G090500 Sobic003G198500 Sobic003G198500 Sobic009G079100--Sobic003G198500 Sobic009G079100--Sobic009G026101 Sobic009G079100--Sobic004G051300 Sobic007G040301 Sobic007G040301 Sobic009G079100--Sobic007G040301 Sobic007G211600 Sobic007G211600 Sobic009G079100--Sobic007G211600 Sobic009G079100--Sobic001G133900 Sobic009G079100--Sobic009G246700 Sobic009G079100--Sobic009G206500
Octagon: transcription factors


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