Gene annotation
Transcriptome id Sobic.009G079100.1
Synonym Sb09g006610
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
serine/threonine-protein kinase, putative, expressed
UniProt C5YUQ1
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF176
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G56720 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os12g01740.1 : serine/threonine-protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a044772 , Zm00025a043262
Brachypodium PNT62245 , KQJ89621 , KQJ89620
Barley HORVU4Hr1G024380.13 , HORVU4Hr1G024380.11 , HORVU4Hr1G024380.10 , HORVU4Hr1G024380.14 , HORVU4Hr1G024380.8 , HORVU4Hr1G024380.12 , HORVU3Hr1G014520.3 , HORVU3Hr1G014520.2 , HORVU3Hr1G014520.1 , HORVU3Hr1G014520.5 , HORVU3Hr1G014520.4 , HORVU4Hr1G024380.3 , HORVU4Hr1G024380.2 , HORVU4Hr1G024380.1 , HORVU4Hr1G024380.7 , HORVU4Hr1G024380.6 , HORVU4Hr1G024380.5 , HORVU4Hr1G024380.4 , HORVU4Hr1G024380.9
Wheat TraesCS4B02G138100 , TraesCS4B02G138100 , TraesCS4B02G138100 , TraesCS4D02G132900 , TraesCS4D02G132900 , TraesCS4A02G178100 , TraesCS4A02G178100 , TraesCS4A02G178100 , TraesCS4A02G178100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G090500 expressed protein -
2 Sobic.003G198500 XIK, putative, expressed K10357: myosin V
3 Sobic.009G026101 - -
4 Sobic.004G051300 galactosyltransferase, putative, expressed -
5 Sobic.007G040301 - -
6 Sobic.007G211600 expressed protein -
7 Sobic.001G133900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
8 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -
9 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
10 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
11 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
12 Sobic.004G163600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.010G180100 transferase family protein, putative, expressed -
14 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
15 Sobic.009G151700 protein of unknown function DUF502 domain containing protein, expressed -
16 Sobic.008G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
17 Sobic.009G250100 extra-large G-protein-related, putative, expressed -
18 Sobic.010G022400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
19 Sobic.009G125900 expressed protein -
20 Sobic.004G274800 protein transport protein-related, putative, expressed -


Gene co-expression network
sample Sobic009G079100 Sobic009G079100 Sobic010G090500 Sobic010G090500 Sobic009G079100--Sobic010G090500 Sobic003G198500 Sobic003G198500 Sobic009G079100--Sobic003G198500 Sobic009G026101 Sobic009G026101 Sobic009G079100--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic009G079100--Sobic004G051300 Sobic007G040301 Sobic007G040301 Sobic009G079100--Sobic007G040301 Sobic007G211600 Sobic007G211600 Sobic009G079100--Sobic007G211600 Sobic001G133900 Sobic001G133900 Sobic009G079100--Sobic001G133900 Sobic009G246700 Sobic009G246700 Sobic009G079100--Sobic009G246700 Sobic009G206500 Sobic009G206500 Sobic009G079100--Sobic009G206500 Sobic001G159800 Sobic001G159800 Sobic010G090500--Sobic001G159800 Sobic010G120300 Sobic010G120300 Sobic010G090500--Sobic010G120300 Sobic010G090500--Sobic009G206500 Sobic010G090500--Sobic009G079100 Sobic001G437500 Sobic001G437500 Sobic010G090500--Sobic001G437500 Sobic006G267500 Sobic006G267500 Sobic010G090500--Sobic006G267500 Sobic001G073150 Sobic001G073150 Sobic010G090500--Sobic001G073150 Sobic009G061000 Sobic009G061000 Sobic010G090500--Sobic009G061000 Sobic009G125900 Sobic009G125900 Sobic010G090500--Sobic009G125900 Sobic003G198500--Sobic009G079100 Sobic003G198500--Sobic010G090500 Sobic003G198500--Sobic001G073150 Sobic003G366300 Sobic003G366300 Sobic003G198500--Sobic003G366300 Sobic002G312700 Sobic002G312700 Sobic003G198500--Sobic002G312700 Sobic003G198500--Sobic004G051300 Sobic003G198500--Sobic009G246700 Sobic010G022400 Sobic010G022400 Sobic003G198500--Sobic010G022400 Sobic008G174800 Sobic008G174800 Sobic003G198500--Sobic008G174800 Sobic009G026101--Sobic001G133900 Sobic009G063400 Sobic009G063400 Sobic009G026101--Sobic009G063400 Sobic009G026101--Sobic009G125900 Sobic009G026101--Sobic009G246700 Sobic009G026101--Sobic009G206500 Sobic002G075500 Sobic002G075500 Sobic009G026101--Sobic002G075500 Sobic006G075000 Sobic006G075000 Sobic009G026101--Sobic006G075000 Sobic003G254700 Sobic003G254700 Sobic009G026101--Sobic003G254700 Sobic010G096100 Sobic010G096100 Sobic009G026101--Sobic010G096100 Sobic001G099100 Sobic001G099100 Sobic004G051300--Sobic001G099100 Sobic002G118700 Sobic002G118700 Sobic004G051300--Sobic002G118700 Sobic004G051300--Sobic009G125900 Sobic004G051300--Sobic002G075500 Sobic004G051300--Sobic009G026101 Sobic002G276600 Sobic002G276600 Sobic004G051300--Sobic002G276600 Sobic004G051300--Sobic009G079100 Sobic004G051300--Sobic010G090500 Sobic004G051300--Sobic009G063400 Sobic007G040301--Sobic009G206500 Sobic007G040301--Sobic001G437500 Sobic007G040301--Sobic009G026101 Sobic001G144200 Sobic001G144200 Sobic007G040301--Sobic001G144200 Sobic001G406700 Sobic001G406700 Sobic007G040301--Sobic001G406700 Sobic008G141200 Sobic008G141200 Sobic007G040301--Sobic008G141200 Sobic004G274800 Sobic004G274800 Sobic007G040301--Sobic004G274800 Sobic009G151700 Sobic009G151700 Sobic007G040301--Sobic009G151700 Sobic007G040301--Sobic006G267500 Sobic007G211600--Sobic009G079100 Sobic007G211600--Sobic009G026101 Sobic007G211600--Sobic002G118700 Sobic007G211600--Sobic010G090500 Sobic007G119500 Sobic007G119500 Sobic007G211600--Sobic007G119500 Sobic007G211600--Sobic009G246700 Sobic007G211600--Sobic004G051300 Sobic001G072600 Sobic001G072600 Sobic007G211600--Sobic001G072600 Sobic007G211600--Sobic009G063400 Sobic001G133900--Sobic009G026101 Sobic001G133900--Sobic009G246700 Sobic004G007600 Sobic004G007600 Sobic001G133900--Sobic004G007600 Sobic001G133900--Sobic003G254700 Sobic010G180100 Sobic010G180100 Sobic001G133900--Sobic010G180100 Sobic004G111100 Sobic004G111100 Sobic001G133900--Sobic004G111100 Sobic001G133900--Sobic002G075500 Sobic001G133900--Sobic009G079100 Sobic001G133900--Sobic009G125900 Sobic009G246700--Sobic001G133900 Sobic009G246700--Sobic009G026101 Sobic009G246700--Sobic001G406700 Sobic009G246700--Sobic007G119500 Sobic009G246700--Sobic001G072600 Sobic002G167600 Sobic002G167600 Sobic009G246700--Sobic002G167600 Sobic001G360700 Sobic001G360700 Sobic009G246700--Sobic001G360700 Sobic001G460400 Sobic001G460400 Sobic009G246700--Sobic001G460400 Sobic006G144600 Sobic006G144600 Sobic009G246700--Sobic006G144600 Sobic007G139500 Sobic007G139500 Sobic009G206500--Sobic007G139500 Sobic010G067800 Sobic010G067800 Sobic009G206500--Sobic010G067800 Sobic009G206500--Sobic006G267500 Sobic009G206500--Sobic001G437500 Sobic009G206500--Sobic001G144200 Sobic009G206500--Sobic007G040301 Sobic002G275500 Sobic002G275500 Sobic009G206500--Sobic002G275500 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600
Octagon: transcription factors


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