Gene annotation
Transcriptome id Sobic.010G090500.1
Synonym CSI1, Sb10g007850
Functional annotation expressed protein
UniProt A0A194YI36
Pfam PF00168 PF13646 PF00514
Panther DB PTHR23315 PTHR23315:SF66
NCBI CDD KOG0166; Karyopherin (importin) alpha KOG4224Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G22125 : binding
RAP-DB (Rice) LOC_Os06g11990.1 : expressed protein
MaizeGDB (Corn) Zm00025a014009 , Zm00025a031635 , Zm00025a042588 , Zm00025a042586 , Zm00025a042587 , Zm00025a042575 , Zm00025a049490
Brachypodium KQK18908
Barley HORVU7Hr1G037420.1 , HORVU7Hr1G037420.3 , HORVU7Hr1G037420.2 , HORVU7Hr1G037420.5 , HORVU7Hr1G037420.4 , HORVU7Hr1G037420.7 , HORVU7Hr1G037420.6
Wheat TraesCS7A02G182200 , TraesCS7D02G183600 , TraesCS7B02G087000
Populus PNT27854 , PNT27852 , PNT27853 , PNT27850 , PNT27851


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G159800 KIP1, putative, expressed -
2 Sobic.010G120300 tm-1GCR237 protein, putative, expressed -
3 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
4 Sobic.009G079100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
5 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
6 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
7 Sobic.001G073150 - K15449: tRNA wybutosine-synthesizing protein 1
8 Sobic.009G061000 DNA binding protein, putative, expressed -
9 Sobic.009G125900 expressed protein -
10 Sobic.008G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
11 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
12 Sobic.006G254500 IQ calmodulin-binding motif family protein, putative, expressed -
13 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
14 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
15 Sobic.002G276600 endoglucanase, putative, expressed -
16 Sobic.009G026101 - -
17 Sobic.008G174900 IQ calmodulin-binding motif domain containing protein, expressed -
18 Sobic.003G198500 XIK, putative, expressed K10357: myosin V
19 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
20 Sobic.006G173200 beige/BEACH domain containing protein, expressed -


Gene co-expression network
sample Sobic010G090500 Sobic010G090500 Sobic001G159800 Sobic001G159800 Sobic010G090500--Sobic001G159800 Sobic010G120300 Sobic010G120300 Sobic010G090500--Sobic010G120300 Sobic009G206500 Sobic009G206500 Sobic010G090500--Sobic009G206500 Sobic009G079100 Sobic009G079100 Sobic010G090500--Sobic009G079100 Sobic001G437500 Sobic001G437500 Sobic010G090500--Sobic001G437500 Sobic006G267500 Sobic006G267500 Sobic010G090500--Sobic006G267500 Sobic001G073150 Sobic001G073150 Sobic010G090500--Sobic001G073150 Sobic009G061000 Sobic009G061000 Sobic010G090500--Sobic009G061000 Sobic009G125900 Sobic009G125900 Sobic010G090500--Sobic009G125900 Sobic001G159800--Sobic010G090500 Sobic001G159800--Sobic001G437500 Sobic001G159800--Sobic009G061000 Sobic001G159800--Sobic009G206500 Sobic009G073400 Sobic009G073400 Sobic001G159800--Sobic009G073400 Sobic003G017500 Sobic003G017500 Sobic001G159800--Sobic003G017500 Sobic001G196000 Sobic001G196000 Sobic001G159800--Sobic001G196000 Sobic006G173200 Sobic006G173200 Sobic001G159800--Sobic006G173200 Sobic001G507200 Sobic001G507200 Sobic001G159800--Sobic001G507200 Sobic010G120300--Sobic001G073150 Sobic010G120300--Sobic010G090500 Sobic009G251100 Sobic009G251100 Sobic010G120300--Sobic009G251100 Sobic010G120300--Sobic001G159800 Sobic008G174900 Sobic008G174900 Sobic010G120300--Sobic008G174900 Sobic001G131700 Sobic001G131700 Sobic010G120300--Sobic001G131700 Sobic003G267000 Sobic003G267000 Sobic010G120300--Sobic003G267000 Sobic010G120300--Sobic009G125900 Sobic001G021500 Sobic001G021500 Sobic010G120300--Sobic001G021500 Sobic007G139500 Sobic007G139500 Sobic009G206500--Sobic007G139500 Sobic010G067800 Sobic010G067800 Sobic009G206500--Sobic010G067800 Sobic009G206500--Sobic006G267500 Sobic009G206500--Sobic001G437500 Sobic001G144200 Sobic001G144200 Sobic009G206500--Sobic001G144200 Sobic007G040301 Sobic007G040301 Sobic009G206500--Sobic007G040301 Sobic002G275500 Sobic002G275500 Sobic009G206500--Sobic002G275500 Sobic009G026101 Sobic009G026101 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600 Sobic009G079100--Sobic010G090500 Sobic003G198500 Sobic003G198500 Sobic009G079100--Sobic003G198500 Sobic009G079100--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic009G079100--Sobic004G051300 Sobic009G079100--Sobic007G040301 Sobic007G211600 Sobic007G211600 Sobic009G079100--Sobic007G211600 Sobic001G133900 Sobic001G133900 Sobic009G079100--Sobic001G133900 Sobic009G246700 Sobic009G246700 Sobic009G079100--Sobic009G246700 Sobic009G079100--Sobic009G206500 Sobic001G437500--Sobic001G196000 Sobic004G243800 Sobic004G243800 Sobic001G437500--Sobic004G243800 Sobic004G274800 Sobic004G274800 Sobic001G437500--Sobic004G274800 Sobic001G437500--Sobic009G206500 Sobic001G437500--Sobic007G139500 Sobic001G437500--Sobic001G159800 Sobic001G437500--Sobic009G061000 Sobic001G437500--Sobic006G267500 Sobic002G276600 Sobic002G276600 Sobic001G437500--Sobic002G276600 Sobic006G267500--Sobic009G061000 Sobic006G267500--Sobic009G206500 Sobic009G212100 Sobic009G212100 Sobic006G267500--Sobic009G212100 Sobic006G254500 Sobic006G254500 Sobic006G267500--Sobic006G254500 Sobic006G267500--Sobic001G437500 Sobic004G315700 Sobic004G315700 Sobic006G267500--Sobic004G315700 Sobic006G267500--Sobic010G090500 Sobic005G204700 Sobic005G204700 Sobic006G267500--Sobic005G204700 Sobic001G296800 Sobic001G296800 Sobic006G267500--Sobic001G296800 Sobic001G073150--Sobic010G120300 Sobic001G073150--Sobic010G090500 Sobic001G073150--Sobic003G198500 Sobic008G191500 Sobic008G191500 Sobic001G073150--Sobic008G191500 Sobic010G096100 Sobic010G096100 Sobic001G073150--Sobic010G096100 Sobic001G073150--Sobic009G125900 Sobic001G073150--Sobic009G251100 Sobic001G073150--Sobic001G159800 Sobic001G073150--Sobic008G174900 Sobic009G061000--Sobic006G267500 Sobic009G061000--Sobic009G073400 Sobic009G061000--Sobic001G437500 Sobic009G061000--Sobic002G276600 Sobic009G061000--Sobic001G159800 Sobic009G061000--Sobic010G090500 Sobic009G061000--Sobic009G206500 Sobic009G167100 Sobic009G167100 Sobic009G061000--Sobic009G167100 Sobic001G051300 Sobic001G051300 Sobic009G061000--Sobic001G051300 Sobic009G063400 Sobic009G063400 Sobic009G125900--Sobic009G063400 Sobic009G125900--Sobic009G026101 Sobic002G075500 Sobic002G075500 Sobic009G125900--Sobic002G075500 Sobic002G118700 Sobic002G118700 Sobic009G125900--Sobic002G118700 Sobic009G125900--Sobic010G090500 Sobic004G265600 Sobic004G265600 Sobic009G125900--Sobic004G265600 Sobic009G125900--Sobic010G096100 Sobic009G125900--Sobic004G051300 Sobic003G254700 Sobic003G254700 Sobic009G125900--Sobic003G254700
Octagon: transcription factors


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