Gene annotation
Transcriptome id Sobic.003G378800.1
Synonym ATAAP3, AAP3, Sb03g041840
Functional annotation amino acid transporter, putative, expressed
UniProt C5XEL2
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF306
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09220 : amino acid permease 2
RAP-DB (Rice) LOC_Os01g66010.1 : amino acid transporter, putative, expressed
MaizeGDB (Corn) Zm00025a025708 , Zm00025a030927 , Zm00025a011043 , Zm00025a034135 , Zm00025a044966 , Zm00025a026558 , Zm00025a054084 , Zm00025a054082 , Zm00025a051049 , Zm00025a012741 , Zm00025a037366
Brachypodium PNT71213 , PNT71214 , PNT76161 , PNT76162 , KQK06164 , PNT69503 , KQJ83307 , KQK10853 , KQK18868 , KQJ89071 , KQK18866 , KQK18867 , KQK01542 , KQJ91992 , KQJ91991 , KQK10901 , KQK18009 , KQK10902
Barley HORVU5Hr1G037660.9 , HORVU5Hr1G037660.8 , HORVU5Hr1G037660.5 , HORVU5Hr1G037660.4 , HORVU5Hr1G037660.7 , HORVU5Hr1G037660.6 , HORVU5Hr1G037660.1 , HORVU5Hr1G037660.3 , HORVU5Hr1G037660.2 , HORVU7Hr1G088560.8 , HORVU7Hr1G088560.6 , HORVU7Hr1G088560.7 , HORVU7Hr1G088560.4 , HORVU7Hr1G088560.5 , HORVU7Hr1G088560.2 , HORVU7Hr1G088560.3 , HORVU7Hr1G088560.1 , HORVU3Hr1G081570.6 , HORVU3Hr1G081570.7 , HORVU3Hr1G081570.4 , HORVU3Hr1G081570.5 , HORVU3Hr1G081570.2 , HORVU3Hr1G081570.3 , HORVU3Hr1G081570.8 , HORVU3Hr1G081570.9 , HORVU3Hr1G081570.10 , HORVU3Hr1G081570.11 , HORVU7Hr1G038330.8 , HORVU7Hr1G038330.1 , HORVU7Hr1G038330.2 , HORVU7Hr1G038330.3 , HORVU7Hr1G038330.4 , HORVU7Hr1G038330.5 , HORVU7Hr1G038330.6 , HORVU7Hr1G038330.7 , HORVU1Hr1G064970.11 , HORVU1Hr1G064970.10 , HORVU1Hr1G064970.12 , HORVU2Hr1G084800.1 , HORVU3Hr1G091070.1 , HORVU3Hr1G091020.1 , HORVU2Hr1G084780.9 , HORVU2Hr1G084780.8 , HORVU2Hr1G084780.7 , HORVU2Hr1G084780.6 , HORVU2Hr1G084780.5 , HORVU2Hr1G084780.4 , HORVU2Hr1G084780.3 , HORVU2Hr1G084780.2 , HORVU2Hr1G084780.1 , HORVU2Hr1G111140.8 , HORVU2Hr1G111140.1 , HORVU2Hr1G111140.2 , HORVU2Hr1G111140.3 , HORVU2Hr1G111140.4 , HORVU2Hr1G111140.5 , HORVU2Hr1G111140.6 , HORVU2Hr1G111140.7 , HORVU3Hr1G091120.1 , HORVU3Hr1G091120.2 , HORVU3Hr1G091120.3 , HORVU3Hr1G091120.4 , HORVU3Hr1G091120.5 , HORVU3Hr1G091120.6 , HORVU3Hr1G091120.7 , HORVU4Hr1G043680.1 , HORVU4Hr1G043680.3 , HORVU4Hr1G043680.2 , HORVU4Hr1G043680.5 , HORVU4Hr1G043680.4 , HORVU3Hr1G091110.1 , HORVU3Hr1G091020.3 , HORVU1Hr1G064970.9 , HORVU1Hr1G064970.8 , HORVU1Hr1G064970.1 , HORVU1Hr1G064970.3 , HORVU1Hr1G064970.2 , HORVU1Hr1G064970.5 , HORVU1Hr1G064970.4 , HORVU1Hr1G064970.7 , HORVU1Hr1G064970.6 , HORVU3Hr1G091020.2 , HORVU3Hr1G091020.5 , HORVU3Hr1G091020.4 , HORVU3Hr1G091020.6 , HORVU2Hr1G061190.7 , HORVU2Hr1G061190.5 , HORVU2Hr1G061190.4 , HORVU2Hr1G061190.3 , HORVU2Hr1G061190.2 , HORVU2Hr1G061190.1
Wheat TraesCS2D02G500000 , TraesCS4B02G100800 , TraesCS3B02G420700 , TraesCS1A02G264500 , TraesCS4D02G097400 , TraesCS3D02G402200 , TraesCS7A02G188200 , TraesCS2A02G499800 , TraesCS7D02G388300 , TraesCS3B02G441100 , TraesCS5B02G116100 , TraesCS7A02G356600 , TraesCS3D02G381500 , TraesCS2D02G256000 , TraesCS3D02G402300 , TraesCS2B02G527800 , TraesCS2A02G268200 , TraesCS1D02G264700 , TraesCS2B02G266600 , TraesCS3B02G441200 , TraesCS7B02G271200 , TraesCS4A02G215300 , TraesCS3B02G441300 , TraesCS5A02G115100 , TraesCS3A02G406800 , TraesCS5D02G125700 , TraesCS3A02G406900 , TraesCS1B02G275200 , TraesCS2B02G367000 , TraesCS2D02G347000 , TraesCS3A02G388000 , TraesCS2D02G346500 , TraesCS7D02G189000 , TraesCS7D02G366200 , TraesCS7B02G093200 , TraesCS3A02G407000 , TraesCS2A02G348600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G119500 expressed protein -
2 Sobic.008G055800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.003G371400 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
4 Sobic.003G270400 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.007G091900 ATP binding protein, putative, expressed -
6 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
7 Sobic.001G072600 expressed protein -
8 Sobic.007G047300 encodes the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT)(PubMedID : 20585750)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylate the tricin precursors luteolin and selgin(PubMedID : 28594846)@monolignol biosynthetic enzyme caffeic acid O-methyl transferase (COMT)(PubMedID : 12756532)@lignin biosynthesis(PubMedID : 12756532)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@O-methyltransferase, putative, expressed K05279: flavonol 3-O-methyltransferase
9 Sobic.009G221900 seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.009G170500 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
11 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
12 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
13 Sobic.009G026101 - -
14 Sobic.003G366300 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
15 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -
16 Sobic.001G406700 expressed protein -
17 Sobic.002G376100 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
18 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
19 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
20 Sobic.003G099166 - -


Gene co-expression network
sample Sobic003G378800 Sobic003G378800 Sobic007G119500 Sobic007G119500 Sobic003G378800--Sobic007G119500 Sobic008G055800 Sobic008G055800 Sobic003G378800--Sobic008G055800 Sobic003G371400 Sobic003G371400 Sobic003G378800--Sobic003G371400 Sobic003G270400 Sobic003G270400 Sobic003G378800--Sobic003G270400 Sobic007G091900 Sobic007G091900 Sobic003G378800--Sobic007G091900 Sobic004G047600 Sobic004G047600 Sobic003G378800--Sobic004G047600 Sobic001G072600 Sobic001G072600 Sobic003G378800--Sobic001G072600 Sobic007G047300 Sobic007G047300 Sobic003G378800--Sobic007G047300 Sobic009G221900 Sobic009G221900 Sobic003G378800--Sobic009G221900 Sobic009G170500 Sobic009G170500 Sobic007G119500--Sobic009G170500 Sobic007G119500--Sobic003G270400 Sobic007G119500--Sobic004G047600 Sobic007G119500--Sobic001G072600 Sobic002G167600 Sobic002G167600 Sobic007G119500--Sobic002G167600 Sobic007G119500--Sobic003G378800 Sobic001G360700 Sobic001G360700 Sobic007G119500--Sobic001G360700 Sobic006G144600 Sobic006G144600 Sobic007G119500--Sobic006G144600 Sobic001G406700 Sobic001G406700 Sobic007G119500--Sobic001G406700 Sobic008G055800--Sobic003G371400 Sobic003G082700 Sobic003G082700 Sobic008G055800--Sobic003G082700 Sobic003G352700 Sobic003G352700 Sobic008G055800--Sobic003G352700 Sobic003G099166 Sobic003G099166 Sobic008G055800--Sobic003G099166 Sobic008G055800--Sobic007G119500 Sobic008G055800--Sobic003G378800 Sobic008G055800--Sobic004G047600 Sobic003G255600 Sobic003G255600 Sobic008G055800--Sobic003G255600 Sobic005G127200 Sobic005G127200 Sobic008G055800--Sobic005G127200 Sobic005G112000 Sobic005G112000 Sobic003G371400--Sobic005G112000 Sobic001G343400 Sobic001G343400 Sobic003G371400--Sobic001G343400 Sobic003G371400--Sobic008G055800 Sobic003G371400--Sobic009G221900 Sobic003G371400--Sobic003G082700 Sobic001G208600 Sobic001G208600 Sobic003G371400--Sobic001G208600 Sobic003G371400--Sobic003G378800 Sobic003G371400--Sobic003G099166 Sobic002G083600 Sobic002G083600 Sobic003G371400--Sobic002G083600 Sobic001G402400 Sobic001G402400 Sobic003G270400--Sobic001G402400 Sobic003G270400--Sobic007G119500 Sobic003G366300 Sobic003G366300 Sobic003G270400--Sobic003G366300 Sobic003G270400--Sobic007G091900 Sobic003G270400--Sobic005G112000 Sobic003G270400--Sobic001G406700 Sobic003G270400--Sobic004G047600 Sobic008G014700 Sobic008G014700 Sobic003G270400--Sobic008G014700 Sobic003G270400--Sobic003G378800 Sobic001G302300 Sobic001G302300 Sobic007G091900--Sobic001G302300 Sobic007G091900--Sobic003G270400 Sobic007G091900--Sobic007G119500 Sobic007G091900--Sobic003G366300 Sobic007G091900--Sobic001G406700 Sobic007G091900--Sobic004G047600 Sobic003G387500 Sobic003G387500 Sobic007G091900--Sobic003G387500 Sobic004G319600 Sobic004G319600 Sobic007G091900--Sobic004G319600 Sobic007G091900--Sobic003G378800 Sobic004G047600--Sobic001G360700 Sobic004G047600--Sobic003G352700 Sobic004G047600--Sobic007G047300 Sobic001G471800 Sobic001G471800 Sobic004G047600--Sobic001G471800 Sobic002G146000 Sobic002G146000 Sobic004G047600--Sobic002G146000 Sobic004G047600--Sobic002G167600 Sobic002G254900 Sobic002G254900 Sobic004G047600--Sobic002G254900 Sobic002G203900 Sobic002G203900 Sobic004G047600--Sobic002G203900 Sobic009G162300 Sobic009G162300 Sobic004G047600--Sobic009G162300 Sobic001G072600--Sobic002G167600 Sobic002G218900 Sobic002G218900 Sobic001G072600--Sobic002G218900 Sobic001G072600--Sobic007G119500 Sobic001G072600--Sobic001G360700 Sobic001G072600--Sobic004G047600 Sobic001G072600--Sobic006G144600 Sobic009G246700 Sobic009G246700 Sobic001G072600--Sobic009G246700 Sobic001G072600--Sobic007G047300 Sobic001G072600--Sobic009G170500 Sobic007G047300--Sobic001G360700 Sobic007G047300--Sobic004G047600 Sobic007G047300--Sobic009G162300 Sobic007G047300--Sobic003G352700 Sobic007G047300--Sobic001G471800 Sobic004G111100 Sobic004G111100 Sobic007G047300--Sobic004G111100 Sobic007G047300--Sobic002G146000 Sobic002G207200 Sobic002G207200 Sobic007G047300--Sobic002G207200 Sobic007G047300--Sobic002G203900 Sobic001G263900 Sobic001G263900 Sobic009G221900--Sobic001G263900 Sobic002G347300 Sobic002G347300 Sobic009G221900--Sobic002G347300 Sobic009G017500 Sobic009G017500 Sobic009G221900--Sobic009G017500 Sobic009G221900--Sobic003G099166 Sobic009G221900--Sobic003G371400 Sobic008G091557 Sobic008G091557 Sobic009G221900--Sobic008G091557 Sobic009G221900--Sobic001G208600 Sobic002G030800 Sobic002G030800 Sobic009G221900--Sobic002G030800 Sobic002G207000 Sobic002G207000 Sobic009G221900--Sobic002G207000
Octagon: transcription factors


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