Gene annotation
Transcriptome id Sobic.008G055800.1
Synonym Sb08g004720, MYB4, ATMYB4
Functional annotation MYB family transcription factor, putative, expressed
UniProt Q8S444 , C5YSS2
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF635
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38620 : myb domain protein 4
RAP-DB (Rice) LOC_Os01g65370.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a056586 , Zm00025a014898 , Zm00025a048106 , Zm00025a055223 , Zm00025a054415 , Zm00025a020983 , Zm00025a053274 , Zm00025a014457 , Zm00025a009985 , Zm00025a044427 , Zm00025a026626 , Zm00025a032132 , Zm00025a037328 , Zm00025a034021 , Zm00025a034217 , Zm00025a048371 , Zm00025a053397 , Zm00025a047793 , Zm00025a025444 , Zm00025a050283 , Zm00025a039543 , Zm00025a036493 , Zm00025a041179 , Zm00025a041887 , Zm00025a020817 , Zm00025a017369 , Zm00025a043868 , Zm00025a029124 , Zm00025a018024 , Zm00025a049338 , Zm00025a007095 , Zm00025a005685 , Zm00025a000572 , Zm00025a010442 , Zm00025a004179 , Zm00025a025715 , Zm00025a011116 , Zm00025a027136 , Zm00025a056901
Brachypodium KQJ91191 , PNT69079 , KQK00034 , KQK09332 , PNT74485 , PNT74484 , KQJ86560 , KQK07949 , PNT65032 , KQJ82982 , KQJ99288 , KQK14343 , KQJ92025 , KQJ89177 , KQJ98746 , KQK02877 , KQK00366 , KQJ87229 , KQJ83761 , KQK20023 , KQK20025 , KQK20024 , KQK06100 , KQK20026 , KQK00405 , PNT76712 , PNT76711 , KQK10836 , KQK15782 , KQJ89311 , KQK00512 , KQJ84313 , KQK19995 , KQJ91235 , PNT76695 , KQK23714 , KQJ83493
Barley HORVU0Hr1G006810.2 , HORVU0Hr1G006810.1 , HORVU7Hr1G072450.2 , HORVU4Hr1G049630.2 , HORVU4Hr1G049630.1 , HORVU0Hr1G005100.1 , HORVU0Hr1G005100.2 , HORVU0Hr1G005100.3 , HORVU2Hr1G120340.21 , HORVU2Hr1G120340.20 , HORVU2Hr1G120340.23 , HORVU2Hr1G120340.22 , HORVU2Hr1G120340.25 , HORVU2Hr1G120340.24 , HORVU2Hr1G120340.26 , HORVU2Hr1G120340.29 , HORVU2Hr1G120340.28 , HORVU2Hr1G041300.4 , HORVU2Hr1G041300.2 , HORVU2Hr1G041300.3 , HORVU2Hr1G106140.1 , HORVU2Hr1G106140.2 , HORVU2Hr1G106140.3 , HORVU5Hr1G083910.2 , HORVU5Hr1G083910.3 , HORVU5Hr1G083910.4 , HORVU5Hr1G083910.5 , HORVU5Hr1G083910.6 , HORVU5Hr1G083910.7 , HORVU5Hr1G083910.9 , HORVU5Hr1G027750.1 , HORVU5Hr1G027750.2 , HORVU7Hr1G072450.3 , HORVU4Hr1G084360.3 , HORVU4Hr1G084360.2 , HORVU4Hr1G084360.1 , HORVU7Hr1G003490.2 , HORVU6Hr1G057670.3 , HORVU6Hr1G057670.1 , HORVU1Hr1G079030.2 , HORVU1Hr1G079030.3 , HORVU1Hr1G079030.1 , HORVU1Hr1G079030.6 , HORVU1Hr1G079030.4 , HORVU1Hr1G079030.5 , HORVU5Hr1G083910.12 , HORVU5Hr1G083910.10 , HORVU5Hr1G083910.11 , HORVU5Hr1G083910.14 , HORVU3Hr1G082210.8 , HORVU3Hr1G082210.2 , HORVU3Hr1G082210.3 , HORVU3Hr1G082210.1 , HORVU3Hr1G082210.6 , HORVU3Hr1G082210.7 , HORVU3Hr1G082210.4 , HORVU3Hr1G082210.5 , HORVU4Hr1G018360.2 , HORVU4Hr1G018360.6 , HORVU4Hr1G018360.7 , HORVU4Hr1G018360.5 , HORVU4Hr1G018360.8 , HORVU2Hr1G120340.36 , HORVU2Hr1G120340.37 , HORVU2Hr1G120340.34 , HORVU2Hr1G120340.35 , HORVU2Hr1G120340.32 , HORVU2Hr1G120340.33 , HORVU2Hr1G120340.30 , HORVU2Hr1G120340.38 , HORVU2Hr1G120340.39 , HORVU2Hr1G120340.43 , HORVU2Hr1G120340.42 , HORVU2Hr1G120340.41 , HORVU2Hr1G120340.40 , HORVU2Hr1G120340.47 , HORVU2Hr1G120340.46 , HORVU2Hr1G120340.45 , HORVU2Hr1G120340.48 , HORVU6Hr1G058630.2 , HORVU2Hr1G087990.2 , HORVU6Hr1G060650.6 , HORVU6Hr1G060650.5 , HORVU6Hr1G060650.4 , HORVU6Hr1G060650.3 , HORVU6Hr1G060650.2 , HORVU6Hr1G060650.1 , HORVU7Hr1G027370.1 , HORVU7Hr1G027370.2 , HORVU4Hr1G028780.3 , HORVU4Hr1G028780.2 , HORVU4Hr1G028780.1 , HORVU4Hr1G028780.7 , HORVU4Hr1G028780.6 , HORVU4Hr1G028780.5 , HORVU4Hr1G028780.8 , HORVU7Hr1G057410.9 , HORVU7Hr1G057410.2 , HORVU7Hr1G057410.3 , HORVU7Hr1G057410.1 , HORVU7Hr1G057410.6 , HORVU7Hr1G057410.7 , HORVU7Hr1G057410.4 , HORVU7Hr1G057410.5 , HORVU3Hr1G092820.1 , HORVU3Hr1G092820.2 , HORVU3Hr1G092820.3 , HORVU2Hr1G120340.50 , HORVU2Hr1G120340.51 , HORVU2Hr1G120340.52 , HORVU2Hr1G120340.53 , HORVU1Hr1G074260.1 , HORVU1Hr1G074260.2 , HORVU1Hr1G074260.3 , HORVU1Hr1G074260.4 , HORVU1Hr1G074260.5 , HORVU1Hr1G074260.6 , HORVU1Hr1G074260.7 , HORVU1Hr1G079040.6 , HORVU1Hr1G079040.5 , HORVU1Hr1G079040.4 , HORVU1Hr1G079040.3 , HORVU1Hr1G079040.2 , HORVU1Hr1G079040.1 , HORVU2Hr1G091630.3 , HORVU2Hr1G091630.2 , HORVU5Hr1G081770.2 , HORVU5Hr1G081770.6 , HORVU5Hr1G081770.7 , HORVU5Hr1G081770.4 , HORVU5Hr1G081770.5 , HORVU5Hr1G081770.8 , HORVU2Hr1G120340.18 , HORVU2Hr1G120340.19 , HORVU2Hr1G120340.14 , HORVU2Hr1G120340.15 , HORVU2Hr1G120340.16 , HORVU2Hr1G120340.17 , HORVU2Hr1G120340.11 , HORVU2Hr1G120340.12 , HORVU2Hr1G120340.13 , HORVU2Hr1G120340.6 , HORVU2Hr1G120340.7 , HORVU2Hr1G120340.4 , HORVU2Hr1G120340.5 , HORVU2Hr1G120340.2 , HORVU2Hr1G120340.3 , HORVU2Hr1G120340.1 , HORVU2Hr1G120340.8 , HORVU6Hr1G026450.3 , HORVU6Hr1G026450.2 , HORVU6Hr1G026450.1 , HORVU6Hr1G058640.1 , HORVU6Hr1G058630.3 , HORVU2Hr1G087990.1 , HORVU6Hr1G058630.1 , HORVU3Hr1G016940.1
Wheat TraesCS7A02G130700 , TraesCS1D02G371900 , TraesCS1A02G365900 , TraesCS2B02G343800 , TraesCS2D02G445900 , TraesCS3A02G257800 , TraesCS4D02G339100 , TraesCS4A02G459200 , TraesCS2D02G446100 , TraesCS3D02G094500 , TraesCS2D02G209600 , TraesCS2D02G446000 , TraesCS6D02G207300 , TraesCS4B02G096500 , TraesCS2D02G446500 , TraesCS5B02G330100 , TraesCS2B02G467700 , TraesCS1D02G371800 , TraesCS1D02G371700 , TraesCS1A02G268800 , TraesCS2A02G206400 , TraesCS3D02G329400 , TraesCS3D02G329400 , TraesCS3D02G329400 , TraesCS2A02G552400 , TraesCS3B02G290600 , TraesCS3B02G109800 , TraesCS1D02G371500 , TraesCS5D02G326600 , TraesCS4B02G344000 , TraesCS7A02G030600 , TraesCS1D02G371600 , TraesCS2D02G446400 , TraesCS4A02G459100 , TraesCS7D02G026800 , TraesCS1A02G366000 , TraesCS4A02G172200 , TraesCS5D02G335700 , TraesCS5B02G320800 , TraesCS2B02G583800 , TraesCS2A02G363800 , TraesCS2A02G447600 , TraesCS5A02G512700 , TraesCS2B02G387000 , TraesCS1A02G366200 , TraesCSU02G069000 , TraesCS1B02G383700 , TraesCS4D02G142900 , TraesCS5A02G111300 , TraesCS5A02G329900 , TraesCS5D02G128200 , TraesCS5D02G128200 , TraesCS2B02G468000 , TraesCS1D02G371400 , TraesCS7B02G031000 , TraesCS2A02G447300 , TraesCS7A02G030800 , TraesCS7A02G030700 , TraesCS3A02G384400 , TraesCS5B02G105900 , TraesCS1B02G279400 , TraesCS2D02G446300 , TraesCS5A02G320500 , TraesCS4A02G217800 , TraesCS6B02G254200 , TraesCS2A02G447400 , TraesCS6D02G219500 , TraesCS6B02G265400 , TraesCS6A02G227700 , TraesCS7D02G026900 , TraesCS5D02G113300 , TraesCS1D02G268900 , TraesCS3D02G377300 , TraesCS5B02G119300 , TraesCS5A02G101000 , TraesCS2D02G361600 , TraesCS2B02G467800 , TraesCS2D02G366400 , TraesCS3D02G257800 , TraesCS6A02G236900 , TraesCS2A02G370000 , TraesCS7D02G300000 , TraesCS7D02G300000 , TraesCS1B02G383600 , TraesCS3B02G416400 , TraesCS2A02G447200 , TraesCS7D02G027000 , TraesCS2B02G381800 , TraesCS4D02G359100 , TraesCS2D02G324800 , TraesCS2A02G338200 , TraesCS7D02G130100 , TraesCS2A02G447100 , TraesCS2A02G445500
Populus PNT39349


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G371400 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
3 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
4 Sobic.003G099166 - -
5 Sobic.007G119500 expressed protein -
6 Sobic.003G378800 amino acid transporter, putative, expressed -
7 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
8 Sobic.003G255600 expressed protein -
9 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
11 Sobic.010G093300 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.004G346300 expressed protein -
13 Sobic.002G094600 "CESA6-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@"cellulose synthase A2, incorporate UDP-sugars into cellulose"(PubMedID : 28944535)@CESA6 - cellulose synthase, expressed K10999: cellulose synthase A
14 Sobic.002G194600 integral membrane protein, putative, expressed -
15 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
16 Sobic.003G023600 peptide-N4-asparagine amidase A, putative, expressed -
17 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
18 Sobic.009G106500 PMR5, putative, expressed -
19 Sobic.005G112000 P21-Rho-binding domain containing protein, putative, expressed -
20 Sobic.003G426200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic008G055800 Sobic008G055800 Sobic003G371400 Sobic003G371400 Sobic008G055800--Sobic003G371400 Sobic003G082700 Sobic003G082700 Sobic008G055800--Sobic003G082700 Sobic003G352700 Sobic003G352700 Sobic008G055800--Sobic003G352700 Sobic003G099166 Sobic003G099166 Sobic008G055800--Sobic003G099166 Sobic007G119500 Sobic007G119500 Sobic008G055800--Sobic007G119500 Sobic003G378800 Sobic003G378800 Sobic008G055800--Sobic003G378800 Sobic004G047600 Sobic004G047600 Sobic008G055800--Sobic004G047600 Sobic003G255600 Sobic003G255600 Sobic008G055800--Sobic003G255600 Sobic005G127200 Sobic005G127200 Sobic008G055800--Sobic005G127200 Sobic005G112000 Sobic005G112000 Sobic003G371400--Sobic005G112000 Sobic001G343400 Sobic001G343400 Sobic003G371400--Sobic001G343400 Sobic003G371400--Sobic008G055800 Sobic009G221900 Sobic009G221900 Sobic003G371400--Sobic009G221900 Sobic003G371400--Sobic003G082700 Sobic001G208600 Sobic001G208600 Sobic003G371400--Sobic001G208600 Sobic003G371400--Sobic003G378800 Sobic003G371400--Sobic003G099166 Sobic002G083600 Sobic002G083600 Sobic003G371400--Sobic002G083600 Sobic003G082700--Sobic003G352700 Sobic003G239100 Sobic003G239100 Sobic003G082700--Sobic003G239100 Sobic009G008800 Sobic009G008800 Sobic003G082700--Sobic009G008800 Sobic003G082700--Sobic004G047600 Sobic001G484000 Sobic001G484000 Sobic003G082700--Sobic001G484000 Sobic006G160900 Sobic006G160900 Sobic003G082700--Sobic006G160900 Sobic003G426200 Sobic003G426200 Sobic003G082700--Sobic003G426200 Sobic001G471800 Sobic001G471800 Sobic003G082700--Sobic001G471800 Sobic001G068500 Sobic001G068500 Sobic003G082700--Sobic001G068500 Sobic003G352700--Sobic003G082700 Sobic003G352700--Sobic004G047600 Sobic003G352700--Sobic009G008800 Sobic003G352700--Sobic003G239100 Sobic003G352700--Sobic001G068500 Sobic003G352700--Sobic001G484000 Sobic001G059500 Sobic001G059500 Sobic003G352700--Sobic001G059500 Sobic003G352700--Sobic005G127200 Sobic007G047300 Sobic007G047300 Sobic003G352700--Sobic007G047300 Sobic003G099166--Sobic001G208600 Sobic003G099166--Sobic001G484000 Sobic001G263900 Sobic001G263900 Sobic003G099166--Sobic001G263900 Sobic006G075000 Sobic006G075000 Sobic003G099166--Sobic006G075000 Sobic005G052500 Sobic005G052500 Sobic003G099166--Sobic005G052500 Sobic003G099166--Sobic003G082700 Sobic003G099166--Sobic003G352700 Sobic002G347300 Sobic002G347300 Sobic003G099166--Sobic002G347300 Sobic003G099166--Sobic009G221900 Sobic009G170500 Sobic009G170500 Sobic007G119500--Sobic009G170500 Sobic003G270400 Sobic003G270400 Sobic007G119500--Sobic003G270400 Sobic007G119500--Sobic004G047600 Sobic001G072600 Sobic001G072600 Sobic007G119500--Sobic001G072600 Sobic002G167600 Sobic002G167600 Sobic007G119500--Sobic002G167600 Sobic007G119500--Sobic003G378800 Sobic001G360700 Sobic001G360700 Sobic007G119500--Sobic001G360700 Sobic006G144600 Sobic006G144600 Sobic007G119500--Sobic006G144600 Sobic001G406700 Sobic001G406700 Sobic007G119500--Sobic001G406700 Sobic003G378800--Sobic007G119500 Sobic003G378800--Sobic008G055800 Sobic003G378800--Sobic003G371400 Sobic003G378800--Sobic003G270400 Sobic007G091900 Sobic007G091900 Sobic003G378800--Sobic007G091900 Sobic003G378800--Sobic004G047600 Sobic003G378800--Sobic001G072600 Sobic003G378800--Sobic007G047300 Sobic003G378800--Sobic009G221900 Sobic004G047600--Sobic001G360700 Sobic004G047600--Sobic003G352700 Sobic004G047600--Sobic007G047300 Sobic004G047600--Sobic001G471800 Sobic002G146000 Sobic002G146000 Sobic004G047600--Sobic002G146000 Sobic004G047600--Sobic002G167600 Sobic002G254900 Sobic002G254900 Sobic004G047600--Sobic002G254900 Sobic002G203900 Sobic002G203900 Sobic004G047600--Sobic002G203900 Sobic009G162300 Sobic009G162300 Sobic004G047600--Sobic009G162300 Sobic009G106500 Sobic009G106500 Sobic003G255600--Sobic009G106500 Sobic001G342000 Sobic001G342000 Sobic003G255600--Sobic001G342000 Sobic001G293100 Sobic001G293100 Sobic003G255600--Sobic001G293100 Sobic005G182900 Sobic005G182900 Sobic003G255600--Sobic005G182900 Sobic006G097900 Sobic006G097900 Sobic003G255600--Sobic006G097900 Sobic004G014600 Sobic004G014600 Sobic003G255600--Sobic004G014600 Sobic006G171100 Sobic006G171100 Sobic003G255600--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic003G255600--Sobic002G029500 Sobic008G033100 Sobic008G033100 Sobic003G255600--Sobic008G033100 Sobic010G093300 Sobic010G093300 Sobic005G127200--Sobic010G093300 Sobic004G266700 Sobic004G266700 Sobic005G127200--Sobic004G266700 Sobic005G127200--Sobic001G068500 Sobic002G030800 Sobic002G030800 Sobic005G127200--Sobic002G030800 Sobic003G341500 Sobic003G341500 Sobic005G127200--Sobic003G341500 Sobic001G059600 Sobic001G059600 Sobic005G127200--Sobic001G059600 Sobic002G030650 Sobic002G030650 Sobic005G127200--Sobic002G030650 Sobic001G413700 Sobic001G413700 Sobic005G127200--Sobic001G413700 Sobic003G368100 Sobic003G368100 Sobic005G127200--Sobic003G368100
Octagon: transcription factors


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