Gene annotation
Transcriptome id Sobic.009G106500.3,Sobic.009G106500.2
Synonym Sb09g017200, TBL33
Functional annotation PMR5, putative, expressed
UniProt C5YWN7
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF62
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40320 : TRICHOME BIREFRINGENCE-LIKE 33
RAP-DB (Rice) LOC_Os05g28830.1 : PMR5, putative, expressed
MaizeGDB (Corn) Zm00025a027000 , Zm00025a001990
Brachypodium KQK10416 , KQK22160 , PNT71482 , PNT71481
Barley HORVU1Hr1G059380.2 , HORVU1Hr1G059380.3 , HORVU1Hr1G059380.1 , HORVU1Hr1G059380.6 , HORVU1Hr1G059380.4 , HORVU1Hr1G059380.5 , HORVU2Hr1G014140.8 , HORVU2Hr1G014140.9 , HORVU2Hr1G014140.2 , HORVU2Hr1G014140.3 , HORVU2Hr1G014140.4 , HORVU2Hr1G014140.5 , HORVU2Hr1G014140.6 , HORVU2Hr1G014140.7 , HORVU2Hr1G014140.10 , HORVU2Hr1G014140.11
Wheat TraesCS4B02G194100 , TraesCS1D02G228100 , TraesCS1A02G226700 , TraesCS2D02G246500 , TraesCS2A02G086900 , TraesCS2B02G101600 , TraesCS4D02G152800 , TraesCS2D02G084200 , TraesCS4A02G110000 , TraesCS1B02G240700 , TraesCS4D02G195000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
2 Sobic.003G255600 expressed protein -
3 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.008G058600 protein kinase family protein, putative, expressed -
5 Sobic.002G082000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
6 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.006G171100 expansin precursor, putative, expressed -
8 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
9 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
10 Sobic.004G299500 - -
11 Sobic.005G101000 - -
12 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
13 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
14 Sobic.006G229901 - -
15 Sobic.007G015000 methyltransferase domain containing protein, expressed -
16 Sobic.001G415100 terpene synthase, putative, expressed -
17 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
18 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
19 Sobic.002G154700 regulatory protein, putative, expressed -
20 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic009G106500 Sobic009G106500 Sobic002G289500 Sobic002G289500 Sobic009G106500--Sobic002G289500 Sobic003G255600 Sobic003G255600 Sobic009G106500--Sobic003G255600 Sobic006G047200 Sobic006G047200 Sobic009G106500--Sobic006G047200 Sobic008G058600 Sobic008G058600 Sobic009G106500--Sobic008G058600 Sobic002G082000 Sobic002G082000 Sobic009G106500--Sobic002G082000 Sobic006G230100 Sobic006G230100 Sobic009G106500--Sobic006G230100 Sobic006G171100 Sobic006G171100 Sobic009G106500--Sobic006G171100 Sobic001G153100 Sobic001G153100 Sobic009G106500--Sobic001G153100 Sobic002G029500 Sobic002G029500 Sobic009G106500--Sobic002G029500 Sobic002G391300 Sobic002G391300 Sobic002G289500--Sobic002G391300 Sobic001G415100 Sobic001G415100 Sobic002G289500--Sobic001G415100 Sobic003G441601 Sobic003G441601 Sobic002G289500--Sobic003G441601 Sobic002G289500--Sobic006G171100 Sobic002G289500--Sobic001G153100 Sobic009G136800 Sobic009G136800 Sobic002G289500--Sobic009G136800 Sobic002G289500--Sobic002G029500 Sobic002G289500--Sobic006G230100 Sobic002G063700 Sobic002G063700 Sobic002G289500--Sobic002G063700 Sobic003G255600--Sobic009G106500 Sobic001G342000 Sobic001G342000 Sobic003G255600--Sobic001G342000 Sobic001G293100 Sobic001G293100 Sobic003G255600--Sobic001G293100 Sobic005G182900 Sobic005G182900 Sobic003G255600--Sobic005G182900 Sobic006G097900 Sobic006G097900 Sobic003G255600--Sobic006G097900 Sobic004G014600 Sobic004G014600 Sobic003G255600--Sobic004G014600 Sobic003G255600--Sobic006G171100 Sobic003G255600--Sobic002G029500 Sobic008G033100 Sobic008G033100 Sobic003G255600--Sobic008G033100 Sobic005G035900 Sobic005G035900 Sobic006G047200--Sobic005G035900 Sobic005G205400 Sobic005G205400 Sobic006G047200--Sobic005G205400 Sobic008G084800 Sobic008G084800 Sobic006G047200--Sobic008G084800 Sobic002G392000 Sobic002G392000 Sobic006G047200--Sobic002G392000 Sobic001G234100 Sobic001G234100 Sobic006G047200--Sobic001G234100 Sobic005G101000 Sobic005G101000 Sobic006G047200--Sobic005G101000 Sobic006G047200--Sobic009G136800 Sobic010G241900 Sobic010G241900 Sobic006G047200--Sobic010G241900 Sobic005G134200 Sobic005G134200 Sobic006G047200--Sobic005G134200 Sobic008G058600--Sobic005G101000 Sobic003G045650 Sobic003G045650 Sobic008G058600--Sobic003G045650 Sobic001G395900 Sobic001G395900 Sobic008G058600--Sobic001G395900 Sobic004G299500 Sobic004G299500 Sobic008G058600--Sobic004G299500 Sobic008G058600--Sobic001G234100 Sobic005G176600 Sobic005G176600 Sobic008G058600--Sobic005G176600 Sobic007G202480 Sobic007G202480 Sobic008G058600--Sobic007G202480 Sobic008G058600--Sobic006G230100 Sobic006G229901 Sobic006G229901 Sobic008G058600--Sobic006G229901 Sobic002G082000--Sobic002G029500 Sobic002G082000--Sobic002G391300 Sobic002G111900 Sobic002G111900 Sobic002G082000--Sobic002G111900 Sobic002G082000--Sobic005G134200 Sobic002G082000--Sobic006G047200 Sobic006G059800 Sobic006G059800 Sobic002G082000--Sobic006G059800 Sobic002G082000--Sobic002G289500 Sobic002G082000--Sobic006G171100 Sobic002G082000--Sobic005G035900 Sobic006G230100--Sobic004G299500 Sobic006G230100--Sobic001G395900 Sobic006G230100--Sobic007G202480 Sobic007G015000 Sobic007G015000 Sobic006G230100--Sobic007G015000 Sobic005G069166 Sobic005G069166 Sobic006G230100--Sobic005G069166 Sobic009G055300 Sobic009G055300 Sobic006G230100--Sobic009G055300 Sobic006G230200 Sobic006G230200 Sobic006G230100--Sobic006G230200 Sobic006G230100--Sobic001G153100 Sobic006G230100--Sobic006G229901 Sobic006G171100--Sobic009G136800 Sobic006G171100--Sobic002G391300 Sobic010G010000 Sobic010G010000 Sobic006G171100--Sobic010G010000 Sobic006G171100--Sobic003G441601 Sobic006G171100--Sobic002G111900 Sobic005G046400 Sobic005G046400 Sobic006G171100--Sobic005G046400 Sobic006G171100--Sobic002G289500 Sobic005G226400 Sobic005G226400 Sobic006G171100--Sobic005G226400 Sobic006G171100--Sobic006G047200 Sobic001G153100--Sobic007G202480 Sobic001G153100--Sobic005G069166 Sobic001G153100--Sobic006G230100 Sobic001G153100--Sobic004G299500 Sobic001G153100--Sobic006G229901 Sobic001G153100--Sobic002G063700 Sobic001G153100--Sobic001G395900 Sobic001G153100--Sobic001G415100 Sobic001G153100--Sobic002G289500 Sobic002G029500--Sobic005G182900 Sobic007G064900 Sobic007G064900 Sobic002G029500--Sobic007G064900 Sobic005G097900 Sobic005G097900 Sobic002G029500--Sobic005G097900 Sobic005G106300 Sobic005G106300 Sobic002G029500--Sobic005G106300 Sobic002G029500--Sobic008G033100 Sobic002G029500--Sobic002G289500 Sobic002G029500--Sobic001G415100 Sobic002G029500--Sobic007G015000 Sobic002G029500--Sobic002G082000
Octagon: transcription factors


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