Gene annotation
Transcriptome id Sobic.005G112000.2,Sobic.005G112000.1
Synonym RIC10, Sb05g013410
Functional annotation P21-Rho-binding domain containing protein, putative, expressed
UniProt A0A1B6PRP4 , C5Y283
Pfam PF00786
Panther DB PTHR23177 PTHR23177:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G04900 : ROP-interactive CRIB motif-containing protein 10
RAP-DB (Rice) LOC_Os11g28310.1 : P21-Rho-binding domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G371400 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
3 Sobic.001G388000 GTPase-activating protein, putative, expressed -
4 Sobic.010G133932 - -
5 Sobic.003G270400 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.003G366300 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
7 Sobic.001G208600 receptor kinase like protein, putative, expressed -
8 Sobic.010G007000 Leucine Rich Repeat family protein, expressed -
9 Sobic.006G160900 NAC domain containing protein, putative, expressed -
10 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
11 Sobic.001G140800 helix-loop-helix DNA-binding protein, putative, expressed -
12 Sobic.005G145100 phospholipase A2, putative, expressed -
13 Sobic.002G030800 app1, putative, expressed -
14 Sobic.003G099166 - -
15 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
16 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
17 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
18 Sobic.009G221900 seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.002G083600 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage


Gene co-expression network
sample Sobic005G112000 Sobic005G112000 Sobic003G371400 Sobic003G371400 Sobic005G112000--Sobic003G371400 Sobic003G082700 Sobic003G082700 Sobic005G112000--Sobic003G082700 Sobic001G388000 Sobic001G388000 Sobic005G112000--Sobic001G388000 Sobic010G133932 Sobic010G133932 Sobic005G112000--Sobic010G133932 Sobic003G270400 Sobic003G270400 Sobic005G112000--Sobic003G270400 Sobic003G366300 Sobic003G366300 Sobic005G112000--Sobic003G366300 Sobic001G208600 Sobic001G208600 Sobic005G112000--Sobic001G208600 Sobic010G007000 Sobic010G007000 Sobic005G112000--Sobic010G007000 Sobic006G160900 Sobic006G160900 Sobic005G112000--Sobic006G160900 Sobic003G371400--Sobic005G112000 Sobic001G343400 Sobic001G343400 Sobic003G371400--Sobic001G343400 Sobic008G055800 Sobic008G055800 Sobic003G371400--Sobic008G055800 Sobic009G221900 Sobic009G221900 Sobic003G371400--Sobic009G221900 Sobic003G371400--Sobic003G082700 Sobic003G371400--Sobic001G208600 Sobic003G378800 Sobic003G378800 Sobic003G371400--Sobic003G378800 Sobic003G099166 Sobic003G099166 Sobic003G371400--Sobic003G099166 Sobic002G083600 Sobic002G083600 Sobic003G371400--Sobic002G083600 Sobic003G352700 Sobic003G352700 Sobic003G082700--Sobic003G352700 Sobic003G239100 Sobic003G239100 Sobic003G082700--Sobic003G239100 Sobic009G008800 Sobic009G008800 Sobic003G082700--Sobic009G008800 Sobic004G047600 Sobic004G047600 Sobic003G082700--Sobic004G047600 Sobic001G484000 Sobic001G484000 Sobic003G082700--Sobic001G484000 Sobic003G082700--Sobic006G160900 Sobic003G426200 Sobic003G426200 Sobic003G082700--Sobic003G426200 Sobic001G471800 Sobic001G471800 Sobic003G082700--Sobic001G471800 Sobic001G068500 Sobic001G068500 Sobic003G082700--Sobic001G068500 Sobic001G388000--Sobic010G133932 Sobic001G140800 Sobic001G140800 Sobic001G388000--Sobic001G140800 Sobic005G145100 Sobic005G145100 Sobic001G388000--Sobic005G145100 Sobic001G388000--Sobic005G112000 Sobic001G388000--Sobic003G366300 Sobic005G110600 Sobic005G110600 Sobic001G388000--Sobic005G110600 Sobic004G290300 Sobic004G290300 Sobic001G388000--Sobic004G290300 Sobic001G388000--Sobic003G239100 Sobic001G388000--Sobic001G484000 Sobic010G133932--Sobic001G388000 Sobic010G133932--Sobic001G140800 Sobic010G133932--Sobic005G110600 Sobic010G133932--Sobic005G112000 Sobic010G133932--Sobic005G145100 Sobic010G133932--Sobic003G239100 Sobic004G266700 Sobic004G266700 Sobic010G133932--Sobic004G266700 Sobic010G133932--Sobic001G484000 Sobic010G133932--Sobic003G082700 Sobic001G402400 Sobic001G402400 Sobic003G270400--Sobic001G402400 Sobic007G119500 Sobic007G119500 Sobic003G270400--Sobic007G119500 Sobic003G270400--Sobic003G366300 Sobic007G091900 Sobic007G091900 Sobic003G270400--Sobic007G091900 Sobic003G270400--Sobic005G112000 Sobic001G406700 Sobic001G406700 Sobic003G270400--Sobic001G406700 Sobic003G270400--Sobic004G047600 Sobic008G014700 Sobic008G014700 Sobic003G270400--Sobic008G014700 Sobic003G270400--Sobic003G378800 Sobic003G366300--Sobic003G270400 Sobic003G366300--Sobic005G112000 Sobic003G366300--Sobic001G388000 Sobic003G366300--Sobic007G091900 Sobic003G366300--Sobic007G119500 Sobic003G366300--Sobic005G110600 Sobic003G366300--Sobic003G099166 Sobic004G163600 Sobic004G163600 Sobic003G366300--Sobic004G163600 Sobic003G198500 Sobic003G198500 Sobic003G366300--Sobic003G198500 Sobic001G208600--Sobic005G145100 Sobic001G208600--Sobic003G099166 Sobic006G075000 Sobic006G075000 Sobic001G208600--Sobic006G075000 Sobic001G208600--Sobic003G239100 Sobic009G017500 Sobic009G017500 Sobic001G208600--Sobic009G017500 Sobic002G053900 Sobic002G053900 Sobic001G208600--Sobic002G053900 Sobic001G334900 Sobic001G334900 Sobic001G208600--Sobic001G334900 Sobic002G030800 Sobic002G030800 Sobic001G208600--Sobic002G030800 Sobic001G208600--Sobic003G352700 Sobic002G064600 Sobic002G064600 Sobic010G007000--Sobic002G064600 Sobic003G419600 Sobic003G419600 Sobic010G007000--Sobic003G419600 Sobic010G007000--Sobic005G110600 Sobic008G170400 Sobic008G170400 Sobic010G007000--Sobic008G170400 Sobic006G062300 Sobic006G062300 Sobic010G007000--Sobic006G062300 Sobic003G296500 Sobic003G296500 Sobic010G007000--Sobic003G296500 Sobic010G007000--Sobic005G112000 Sobic010G007000--Sobic001G402400 Sobic002G062600 Sobic002G062600 Sobic010G007000--Sobic002G062600 Sobic006G160900--Sobic009G008800 Sobic001G250100 Sobic001G250100 Sobic006G160900--Sobic001G250100 Sobic006G160900--Sobic003G082700 Sobic010G155800 Sobic010G155800 Sobic006G160900--Sobic010G155800 Sobic006G160900--Sobic001G484000 Sobic005G127200 Sobic005G127200 Sobic006G160900--Sobic005G127200 Sobic006G160900--Sobic001G471800 Sobic010G093300 Sobic010G093300 Sobic006G160900--Sobic010G093300 Sobic006G160900--Sobic003G352700
Octagon: transcription factors


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