Gene annotation
Transcriptome id Sobic.001G388000.5,Sobic.001G388000.3,Sobic.001G388000.8,Sobic.001G388000.7,Sobic.001G388000.9,Sobic.001G388000.6,Sobic.001G388000.1,Sobic.001G388000.4,Sobic.001G388000.10,Sobic.001G388000.2
Synonym ZIGA4, AGD14, Sb01g036780
Functional annotation GTPase-activating protein, putative, expressed
UniProt C5X1R9 , A0A1Z5S9V2 , A0A1Z5S9S6 , A0A1Z5S9S5 , A0A1Z5S9T3 , A0A1B6QNH9
Pfam PF01412
Panther DB PTHR23180 PTHR23180:SF281 PTHR23180:SF281 PTHR23180
NCBI CDD KOG0702; Predicted GTPase-activating protein
KEGG Orthology -
Gene Ontology GO:0005096; GTPase activator activity


Orthologs (automatic annotation)
TAIR AT1G08680 : ARF GAP-like zinc finger-containing protein ZIGA4
RAP-DB (Rice) LOC_Os03g20720.1 : GTPase-activating protein, putative, expressed
MaizeGDB (Corn) Zm00025a002255
Brachypodium -
Barley HORVU4Hr1G051740.35 , HORVU4Hr1G051740.36 , HORVU4Hr1G051740.33 , HORVU4Hr1G051740.32 , HORVU4Hr1G051740.20 , HORVU4Hr1G051740.21 , HORVU4Hr1G051740.25 , HORVU4Hr1G051740.17 , HORVU4Hr1G051740.16 , HORVU4Hr1G051740.1 , HORVU4Hr1G051740.3 , HORVU4Hr1G051740.2 , HORVU4Hr1G051740.7 , HORVU4Hr1G051740.6 , HORVU4Hr1G051740.5 , HORVU4Hr1G051740.4 , HORVU4Hr1G051740.9 , HORVU4Hr1G051740.8
Wheat TraesCS4B02G175500 , TraesCS4D02G177400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G133932 - -
2 Sobic.001G140800 helix-loop-helix DNA-binding protein, putative, expressed -
3 Sobic.005G145100 phospholipase A2, putative, expressed -
4 Sobic.005G112000 P21-Rho-binding domain containing protein, putative, expressed -
5 Sobic.003G366300 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
6 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.004G290300 anthranilate phosphoribosyltransferase, putative, expressed -
8 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
9 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
10 Sobic.003G270400 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.005G087400 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
13 Sobic.001G129600 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
14 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
15 Sobic.001G208600 receptor kinase like protein, putative, expressed -
16 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
17 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
19 Sobic.003G371400 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
20 Sobic.006G160900 NAC domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G388000 Sobic001G388000 Sobic010G133932 Sobic010G133932 Sobic001G388000--Sobic010G133932 Sobic001G140800 Sobic001G140800 Sobic001G388000--Sobic001G140800 Sobic005G145100 Sobic005G145100 Sobic001G388000--Sobic005G145100 Sobic005G112000 Sobic005G112000 Sobic001G388000--Sobic005G112000 Sobic003G366300 Sobic003G366300 Sobic001G388000--Sobic003G366300 Sobic005G110600 Sobic005G110600 Sobic001G388000--Sobic005G110600 Sobic004G290300 Sobic004G290300 Sobic001G388000--Sobic004G290300 Sobic003G239100 Sobic003G239100 Sobic001G388000--Sobic003G239100 Sobic001G484000 Sobic001G484000 Sobic001G388000--Sobic001G484000 Sobic010G133932--Sobic001G388000 Sobic010G133932--Sobic001G140800 Sobic010G133932--Sobic005G110600 Sobic010G133932--Sobic005G112000 Sobic010G133932--Sobic005G145100 Sobic010G133932--Sobic003G239100 Sobic004G266700 Sobic004G266700 Sobic010G133932--Sobic004G266700 Sobic010G133932--Sobic001G484000 Sobic003G082700 Sobic003G082700 Sobic010G133932--Sobic003G082700 Sobic001G140800--Sobic005G110600 Sobic001G140800--Sobic001G388000 Sobic001G140800--Sobic005G145100 Sobic001G140800--Sobic010G133932 Sobic005G087400 Sobic005G087400 Sobic001G140800--Sobic005G087400 Sobic001G129600 Sobic001G129600 Sobic001G140800--Sobic001G129600 Sobic005G130700 Sobic005G130700 Sobic001G140800--Sobic005G130700 Sobic001G140800--Sobic001G484000 Sobic006G062300 Sobic006G062300 Sobic001G140800--Sobic006G062300 Sobic002G028500 Sobic002G028500 Sobic005G145100--Sobic002G028500 Sobic001G208600 Sobic001G208600 Sobic005G145100--Sobic001G208600 Sobic005G145100--Sobic003G239100 Sobic005G145100--Sobic004G290300 Sobic005G145100--Sobic001G129600 Sobic005G145100--Sobic004G266700 Sobic005G145100--Sobic001G140800 Sobic005G145100--Sobic001G388000 Sobic001G144800 Sobic001G144800 Sobic005G145100--Sobic001G144800 Sobic003G371400 Sobic003G371400 Sobic005G112000--Sobic003G371400 Sobic005G112000--Sobic003G082700 Sobic005G112000--Sobic001G388000 Sobic005G112000--Sobic010G133932 Sobic003G270400 Sobic003G270400 Sobic005G112000--Sobic003G270400 Sobic005G112000--Sobic003G366300 Sobic005G112000--Sobic001G208600 Sobic010G007000 Sobic010G007000 Sobic005G112000--Sobic010G007000 Sobic006G160900 Sobic006G160900 Sobic005G112000--Sobic006G160900 Sobic003G366300--Sobic003G270400 Sobic003G366300--Sobic005G112000 Sobic003G366300--Sobic001G388000 Sobic007G091900 Sobic007G091900 Sobic003G366300--Sobic007G091900 Sobic007G119500 Sobic007G119500 Sobic003G366300--Sobic007G119500 Sobic003G366300--Sobic005G110600 Sobic003G099166 Sobic003G099166 Sobic003G366300--Sobic003G099166 Sobic004G163600 Sobic004G163600 Sobic003G366300--Sobic004G163600 Sobic003G198500 Sobic003G198500 Sobic003G366300--Sobic003G198500 Sobic005G110600--Sobic005G130700 Sobic005G110600--Sobic006G062300 Sobic004G297950 Sobic004G297950 Sobic005G110600--Sobic004G297950 Sobic005G110600--Sobic001G140800 Sobic003G419600 Sobic003G419600 Sobic005G110600--Sobic003G419600 Sobic005G110600--Sobic010G133932 Sobic005G110600--Sobic010G007000 Sobic003G269100 Sobic003G269100 Sobic005G110600--Sobic003G269100 Sobic005G110600--Sobic001G484000 Sobic004G290300--Sobic005G145100 Sobic004G290300--Sobic001G129600 Sobic004G290300--Sobic002G028500 Sobic004G290300--Sobic001G140800 Sobic004G290300--Sobic001G388000 Sobic004G290300--Sobic001G208600 Sobic004G290300--Sobic004G266700 Sobic001G343400 Sobic001G343400 Sobic004G290300--Sobic001G343400 Sobic004G290300--Sobic005G112000 Sobic003G239100--Sobic003G082700 Sobic009G008800 Sobic009G008800 Sobic003G239100--Sobic009G008800 Sobic003G352700 Sobic003G352700 Sobic003G239100--Sobic003G352700 Sobic003G239100--Sobic005G145100 Sobic003G239100--Sobic004G266700 Sobic005G127200 Sobic005G127200 Sobic003G239100--Sobic005G127200 Sobic002G053900 Sobic002G053900 Sobic003G239100--Sobic002G053900 Sobic002G030800 Sobic002G030800 Sobic003G239100--Sobic002G030800 Sobic003G239100--Sobic001G484000 Sobic005G052500 Sobic005G052500 Sobic001G484000--Sobic005G052500 Sobic001G046800 Sobic001G046800 Sobic001G484000--Sobic001G046800 Sobic001G484000--Sobic003G352700 Sobic001G484000--Sobic002G053900 Sobic001G484000--Sobic003G269100 Sobic001G484000--Sobic003G082700 Sobic002G094600 Sobic002G094600 Sobic001G484000--Sobic002G094600 Sobic001G484000--Sobic009G008800 Sobic001G484000--Sobic003G239100
Octagon: transcription factors


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