Gene annotation
Transcriptome id Sobic.010G007000.1
Synonym RPS2, Sb10g000860
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt C5Z286
Pfam -
Panther DB PTHR23155 PTHR23155:SF442
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G26090 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os04g02520.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU6Hr1G004040.4 , HORVU6Hr1G004040.5 , HORVU6Hr1G004040.1 , HORVU6Hr1G004040.2 , HORVU6Hr1G004040.3
Wheat TraesCS6D02G041400 , TraesCS6D02G041400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G064600 expressed protein -
2 Sobic.003G419600 disease resistance protein RGA2, putative, expressed -
3 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
4 Sobic.008G170400 expressed protein -
5 Sobic.006G062300 Leucine Rich Repeat family protein, expressed -
6 Sobic.003G296500 leucine rich repeat family protein, putative, expressed -
7 Sobic.005G112000 P21-Rho-binding domain containing protein, putative, expressed -
8 Sobic.001G402400 expressed protein -
9 Sobic.002G062600 Leucine Rich Repeat family protein, expressed -
10 Sobic.007G202100 expressed protein -
11 Sobic.003G270400 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.005G057000 Leucine Rich Repeat family protein, expressed -
13 Sobic.007G111700 glutathione S-transferase, C-terminal domain containing protein, expressed -
14 Sobic.005G130700 expressed protein -
15 Sobic.002G283500 glutathione S-transferase, C-terminal domain containing protein, expressed -
16 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
17 Sobic.004G297950 - -
18 Sobic.010G220300 glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed -
19 Sobic.010G133932 - -
20 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase


Gene co-expression network
sample Sobic010G007000 Sobic010G007000 Sobic002G064600 Sobic002G064600 Sobic010G007000--Sobic002G064600 Sobic003G419600 Sobic003G419600 Sobic010G007000--Sobic003G419600 Sobic005G110600 Sobic005G110600 Sobic010G007000--Sobic005G110600 Sobic008G170400 Sobic008G170400 Sobic010G007000--Sobic008G170400 Sobic006G062300 Sobic006G062300 Sobic010G007000--Sobic006G062300 Sobic003G296500 Sobic003G296500 Sobic010G007000--Sobic003G296500 Sobic005G112000 Sobic005G112000 Sobic010G007000--Sobic005G112000 Sobic001G402400 Sobic001G402400 Sobic010G007000--Sobic001G402400 Sobic002G062600 Sobic002G062600 Sobic010G007000--Sobic002G062600 Sobic002G064600--Sobic010G007000 Sobic002G064600--Sobic005G110600 Sobic002G064600--Sobic008G170400 Sobic002G064600--Sobic003G296500 Sobic002G064600--Sobic003G419600 Sobic002G064600--Sobic002G062600 Sobic003G006100 Sobic003G006100 Sobic002G064600--Sobic003G006100 Sobic002G064600--Sobic006G062300 Sobic005G130700 Sobic005G130700 Sobic002G064600--Sobic005G130700 Sobic003G419600--Sobic005G130700 Sobic003G419600--Sobic010G007000 Sobic003G419600--Sobic005G110600 Sobic003G419600--Sobic006G062300 Sobic001G037400 Sobic001G037400 Sobic003G419600--Sobic001G037400 Sobic003G277200 Sobic003G277200 Sobic003G419600--Sobic003G277200 Sobic007G111700 Sobic007G111700 Sobic003G419600--Sobic007G111700 Sobic003G419600--Sobic003G006100 Sobic010G116100 Sobic010G116100 Sobic003G419600--Sobic010G116100 Sobic005G110600--Sobic005G130700 Sobic005G110600--Sobic006G062300 Sobic004G297950 Sobic004G297950 Sobic005G110600--Sobic004G297950 Sobic001G140800 Sobic001G140800 Sobic005G110600--Sobic001G140800 Sobic005G110600--Sobic003G419600 Sobic010G133932 Sobic010G133932 Sobic005G110600--Sobic010G133932 Sobic005G110600--Sobic010G007000 Sobic003G269100 Sobic003G269100 Sobic005G110600--Sobic003G269100 Sobic001G484000 Sobic001G484000 Sobic005G110600--Sobic001G484000 Sobic008G170400--Sobic007G111700 Sobic002G016400 Sobic002G016400 Sobic008G170400--Sobic002G016400 Sobic005G098400 Sobic005G098400 Sobic008G170400--Sobic005G098400 Sobic005G231400 Sobic005G231400 Sobic008G170400--Sobic005G231400 Sobic003G418300 Sobic003G418300 Sobic008G170400--Sobic003G418300 Sobic008G170400--Sobic010G007000 Sobic008G170400--Sobic005G110600 Sobic008G170400--Sobic002G064600 Sobic008G170400--Sobic006G062300 Sobic006G062300--Sobic005G130700 Sobic006G062300--Sobic005G110600 Sobic006G062300--Sobic010G116100 Sobic006G062300--Sobic003G419600 Sobic006G062300--Sobic010G007000 Sobic006G062300--Sobic001G140800 Sobic006G062300--Sobic008G170400 Sobic006G062300--Sobic004G297950 Sobic007G202100 Sobic007G202100 Sobic006G062300--Sobic007G202100 Sobic003G296500--Sobic001G402400 Sobic007G208100 Sobic007G208100 Sobic003G296500--Sobic007G208100 Sobic010G104400 Sobic010G104400 Sobic003G296500--Sobic010G104400 Sobic005G231300 Sobic005G231300 Sobic003G296500--Sobic005G231300 Sobic003G052100 Sobic003G052100 Sobic003G296500--Sobic003G052100 Sobic001G301900 Sobic001G301900 Sobic003G296500--Sobic001G301900 Sobic010G220300 Sobic010G220300 Sobic003G296500--Sobic010G220300 Sobic001G029800 Sobic001G029800 Sobic003G296500--Sobic001G029800 Sobic004G271500 Sobic004G271500 Sobic003G296500--Sobic004G271500 Sobic003G371400 Sobic003G371400 Sobic005G112000--Sobic003G371400 Sobic003G082700 Sobic003G082700 Sobic005G112000--Sobic003G082700 Sobic001G388000 Sobic001G388000 Sobic005G112000--Sobic001G388000 Sobic005G112000--Sobic010G133932 Sobic003G270400 Sobic003G270400 Sobic005G112000--Sobic003G270400 Sobic003G366300 Sobic003G366300 Sobic005G112000--Sobic003G366300 Sobic001G208600 Sobic001G208600 Sobic005G112000--Sobic001G208600 Sobic005G112000--Sobic010G007000 Sobic006G160900 Sobic006G160900 Sobic005G112000--Sobic006G160900 Sobic001G402400--Sobic003G270400 Sobic001G402400--Sobic003G052100 Sobic002G275500 Sobic002G275500 Sobic001G402400--Sobic002G275500 Sobic001G402400--Sobic003G296500 Sobic001G402400--Sobic010G220300 Sobic008G014700 Sobic008G014700 Sobic001G402400--Sobic008G014700 Sobic005G057000 Sobic005G057000 Sobic001G402400--Sobic005G057000 Sobic002G376100 Sobic002G376100 Sobic001G402400--Sobic002G376100 Sobic006G009500 Sobic006G009500 Sobic001G402400--Sobic006G009500 Sobic002G062600--Sobic010G007000 Sobic002G062600--Sobic002G064600 Sobic002G062600--Sobic007G111700 Sobic002G062600--Sobic003G419600 Sobic002G062600--Sobic005G057000 Sobic002G062600--Sobic005G110600 Sobic002G062600--Sobic005G112000 Sobic008G114000 Sobic008G114000 Sobic002G062600--Sobic008G114000 Sobic002G062600--Sobic006G062300
Octagon: transcription factors


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