Gene annotation
Transcriptome id Sobic.003G419600.1
Synonym
Functional annotation disease resistance protein RGA2, putative, expressed
UniProt A0A1B6Q833
Pfam PF00560 PF00931
Panther DB PTHR23155
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g10550.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G130700 expressed protein -
2 Sobic.010G007000 Leucine Rich Repeat family protein, expressed -
3 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
4 Sobic.006G062300 Leucine Rich Repeat family protein, expressed -
5 Sobic.001G037400 expressed protein -
6 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
7 Sobic.007G111700 glutathione S-transferase, C-terminal domain containing protein, expressed -
8 Sobic.003G006100 Leucine Rich Repeat family protein, expressed -
9 Sobic.010G116100 expressed protein -
10 Sobic.007G012800 Leucine Rich Repeat family protein, expressed -
11 Sobic.007G202100 expressed protein -
12 Sobic.009G251100 TTL1, putative, expressed K09527: DnaJ homolog subfamily C member 7
13 Sobic.009G134000 receptor-like protein kinase precursor, putative, expressed -
14 Sobic.008G170400 expressed protein -
15 Sobic.002G064600 expressed protein -
16 Sobic.001G140800 helix-loop-helix DNA-binding protein, putative, expressed -
17 Sobic.001G345200 OsFBX94 - F-box domain containing protein, expressed -
18 Sobic.002G062600 Leucine Rich Repeat family protein, expressed -
19 Sobic.007G130900 expressed protein -
20 Sobic.005G130600 expressed protein -


Gene co-expression network
sample Sobic003G419600 Sobic003G419600 Sobic005G130700 Sobic005G130700 Sobic003G419600--Sobic005G130700 Sobic010G007000 Sobic010G007000 Sobic003G419600--Sobic010G007000 Sobic005G110600 Sobic005G110600 Sobic003G419600--Sobic005G110600 Sobic006G062300 Sobic006G062300 Sobic003G419600--Sobic006G062300 Sobic001G037400 Sobic001G037400 Sobic003G419600--Sobic001G037400 Sobic003G277200 Sobic003G277200 Sobic003G419600--Sobic003G277200 Sobic007G111700 Sobic007G111700 Sobic003G419600--Sobic007G111700 Sobic003G006100 Sobic003G006100 Sobic003G419600--Sobic003G006100 Sobic010G116100 Sobic010G116100 Sobic003G419600--Sobic010G116100 Sobic005G130700--Sobic005G110600 Sobic005G130700--Sobic006G062300 Sobic005G130700--Sobic010G116100 Sobic005G130700--Sobic003G419600 Sobic001G140800 Sobic001G140800 Sobic005G130700--Sobic001G140800 Sobic005G130700--Sobic003G277200 Sobic009G134000 Sobic009G134000 Sobic005G130700--Sobic009G134000 Sobic006G245600 Sobic006G245600 Sobic005G130700--Sobic006G245600 Sobic003G272900 Sobic003G272900 Sobic005G130700--Sobic003G272900 Sobic002G064600 Sobic002G064600 Sobic010G007000--Sobic002G064600 Sobic010G007000--Sobic003G419600 Sobic010G007000--Sobic005G110600 Sobic008G170400 Sobic008G170400 Sobic010G007000--Sobic008G170400 Sobic010G007000--Sobic006G062300 Sobic003G296500 Sobic003G296500 Sobic010G007000--Sobic003G296500 Sobic005G112000 Sobic005G112000 Sobic010G007000--Sobic005G112000 Sobic001G402400 Sobic001G402400 Sobic010G007000--Sobic001G402400 Sobic002G062600 Sobic002G062600 Sobic010G007000--Sobic002G062600 Sobic005G110600--Sobic005G130700 Sobic005G110600--Sobic006G062300 Sobic004G297950 Sobic004G297950 Sobic005G110600--Sobic004G297950 Sobic005G110600--Sobic001G140800 Sobic005G110600--Sobic003G419600 Sobic010G133932 Sobic010G133932 Sobic005G110600--Sobic010G133932 Sobic005G110600--Sobic010G007000 Sobic003G269100 Sobic003G269100 Sobic005G110600--Sobic003G269100 Sobic001G484000 Sobic001G484000 Sobic005G110600--Sobic001G484000 Sobic006G062300--Sobic005G130700 Sobic006G062300--Sobic005G110600 Sobic006G062300--Sobic010G116100 Sobic006G062300--Sobic003G419600 Sobic006G062300--Sobic010G007000 Sobic006G062300--Sobic001G140800 Sobic006G062300--Sobic008G170400 Sobic006G062300--Sobic004G297950 Sobic007G202100 Sobic007G202100 Sobic006G062300--Sobic007G202100 Sobic004G243800 Sobic004G243800 Sobic001G037400--Sobic004G243800 Sobic008G039800 Sobic008G039800 Sobic001G037400--Sobic008G039800 Sobic001G037400--Sobic003G277200 Sobic001G037400--Sobic003G419600 Sobic001G037400--Sobic005G110600 Sobic004G288500 Sobic004G288500 Sobic001G037400--Sobic004G288500 Sobic001G196000 Sobic001G196000 Sobic001G037400--Sobic001G196000 Sobic001G037400--Sobic003G006100 Sobic009G211800 Sobic009G211800 Sobic001G037400--Sobic009G211800 Sobic002G419200 Sobic002G419200 Sobic003G277200--Sobic002G419200 Sobic003G338200 Sobic003G338200 Sobic003G277200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic003G277200--Sobic003G116100 Sobic003G277200--Sobic008G039800 Sobic010G216600 Sobic010G216600 Sobic003G277200--Sobic010G216600 Sobic001G345200 Sobic001G345200 Sobic003G277200--Sobic001G345200 Sobic001G285200 Sobic001G285200 Sobic003G277200--Sobic001G285200 Sobic007G012800 Sobic007G012800 Sobic003G277200--Sobic007G012800 Sobic003G277200--Sobic001G037400 Sobic007G111700--Sobic008G170400 Sobic002G016400 Sobic002G016400 Sobic007G111700--Sobic002G016400 Sobic005G098400 Sobic005G098400 Sobic007G111700--Sobic005G098400 Sobic007G050500 Sobic007G050500 Sobic007G111700--Sobic007G050500 Sobic005G025900 Sobic005G025900 Sobic007G111700--Sobic005G025900 Sobic007G111700--Sobic001G345200 Sobic002G034301 Sobic002G034301 Sobic007G111700--Sobic002G034301 Sobic007G111700--Sobic007G202100 Sobic007G111700--Sobic003G419600 Sobic010G119900 Sobic010G119900 Sobic003G006100--Sobic010G119900 Sobic003G006100--Sobic003G419600 Sobic003G006100--Sobic001G140800 Sobic004G150800 Sobic004G150800 Sobic003G006100--Sobic004G150800 Sobic010G124200 Sobic010G124200 Sobic003G006100--Sobic010G124200 Sobic007G090424 Sobic007G090424 Sobic003G006100--Sobic007G090424 Sobic006G096500 Sobic006G096500 Sobic003G006100--Sobic006G096500 Sobic010G228100 Sobic010G228100 Sobic003G006100--Sobic010G228100 Sobic003G006100--Sobic001G037400 Sobic010G116100--Sobic005G130700 Sobic010G116100--Sobic006G062300 Sobic005G130550 Sobic005G130550 Sobic010G116100--Sobic005G130550 Sobic010G116100--Sobic007G012800 Sobic010G116100--Sobic005G110600 Sobic010G116100--Sobic003G419600 Sobic010G116100--Sobic004G297950 Sobic010G116100--Sobic003G277200 Sobic010G116100--Sobic009G134000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.