Gene annotation
Transcriptome id Sobic.005G130600.1
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RIV5
Pfam -
Panther DB PTHR36480 PTHR36480:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g02840.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G297950 - -
2 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
4 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.001G140800 helix-loop-helix DNA-binding protein, putative, expressed -
6 Sobic.003G115200 expressed protein -
7 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
8 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.001G099600 ankyrin repeat family protein, putative, expressed -
10 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
11 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
12 Sobic.002G280300 expressed protein -
13 Sobic.010G116100 expressed protein -
14 Sobic.005G018900 phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
15 Sobic.006G062300 Leucine Rich Repeat family protein, expressed -
16 Sobic.005G051600 plant protein of unknown function domain containing protein, expressed -
17 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
18 Sobic.005G130550 - -
19 Sobic.004G050700 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.003G250700 fasciclin domain containing protein, expressed -


Gene co-expression network
sample Sobic005G130600 Sobic005G130600 Sobic004G297950 Sobic004G297950 Sobic005G130600--Sobic004G297950 Sobic003G321400 Sobic003G321400 Sobic005G130600--Sobic003G321400 Sobic003G269100 Sobic003G269100 Sobic005G130600--Sobic003G269100 Sobic005G110600 Sobic005G110600 Sobic005G130600--Sobic005G110600 Sobic001G140800 Sobic001G140800 Sobic005G130600--Sobic001G140800 Sobic003G115200 Sobic003G115200 Sobic005G130600--Sobic003G115200 Sobic006G096500 Sobic006G096500 Sobic005G130600--Sobic006G096500 Sobic001G046800 Sobic001G046800 Sobic005G130600--Sobic001G046800 Sobic001G099600 Sobic001G099600 Sobic005G130600--Sobic001G099600 Sobic004G297950--Sobic003G269100 Sobic004G297950--Sobic005G130600 Sobic004G297950--Sobic003G321400 Sobic004G297950--Sobic005G110600 Sobic005G047100 Sobic005G047100 Sobic004G297950--Sobic005G047100 Sobic004G297950--Sobic001G099600 Sobic001G264400 Sobic001G264400 Sobic004G297950--Sobic001G264400 Sobic005G052500 Sobic005G052500 Sobic004G297950--Sobic005G052500 Sobic001G484000 Sobic001G484000 Sobic004G297950--Sobic001G484000 Sobic003G321400--Sobic003G269100 Sobic003G321400--Sobic003G115200 Sobic009G221800 Sobic009G221800 Sobic003G321400--Sobic009G221800 Sobic010G047600 Sobic010G047600 Sobic003G321400--Sobic010G047600 Sobic003G000200 Sobic003G000200 Sobic003G321400--Sobic003G000200 Sobic003G078900 Sobic003G078900 Sobic003G321400--Sobic003G078900 Sobic001G261460 Sobic001G261460 Sobic003G321400--Sobic001G261460 Sobic003G321400--Sobic001G264400 Sobic003G321400--Sobic001G099600 Sobic003G269100--Sobic003G321400 Sobic003G269100--Sobic001G099600 Sobic003G269100--Sobic004G297950 Sobic003G269100--Sobic003G115200 Sobic003G269100--Sobic010G047600 Sobic003G269100--Sobic001G261460 Sobic003G269100--Sobic001G264400 Sobic003G269100--Sobic001G484000 Sobic003G269100--Sobic001G046800 Sobic005G130700 Sobic005G130700 Sobic005G110600--Sobic005G130700 Sobic006G062300 Sobic006G062300 Sobic005G110600--Sobic006G062300 Sobic005G110600--Sobic004G297950 Sobic005G110600--Sobic001G140800 Sobic003G419600 Sobic003G419600 Sobic005G110600--Sobic003G419600 Sobic010G133932 Sobic010G133932 Sobic005G110600--Sobic010G133932 Sobic010G007000 Sobic010G007000 Sobic005G110600--Sobic010G007000 Sobic005G110600--Sobic003G269100 Sobic005G110600--Sobic001G484000 Sobic001G140800--Sobic005G110600 Sobic001G388000 Sobic001G388000 Sobic001G140800--Sobic001G388000 Sobic005G145100 Sobic005G145100 Sobic001G140800--Sobic005G145100 Sobic001G140800--Sobic010G133932 Sobic005G087400 Sobic005G087400 Sobic001G140800--Sobic005G087400 Sobic001G129600 Sobic001G129600 Sobic001G140800--Sobic001G129600 Sobic001G140800--Sobic005G130700 Sobic001G140800--Sobic001G484000 Sobic001G140800--Sobic006G062300 Sobic003G115200--Sobic003G321400 Sobic003G115200--Sobic003G000200 Sobic003G115200--Sobic003G269100 Sobic003G115200--Sobic001G261460 Sobic003G115200--Sobic010G047600 Sobic003G115200--Sobic009G221800 Sobic010G014400 Sobic010G014400 Sobic003G115200--Sobic010G014400 Sobic009G130300 Sobic009G130300 Sobic003G115200--Sobic009G130300 Sobic001G514200 Sobic001G514200 Sobic003G115200--Sobic001G514200 Sobic004G150800 Sobic004G150800 Sobic006G096500--Sobic004G150800 Sobic006G096500--Sobic005G087400 Sobic010G096100 Sobic010G096100 Sobic006G096500--Sobic010G096100 Sobic006G096500--Sobic003G269100 Sobic006G096500--Sobic001G140800 Sobic003G006100 Sobic003G006100 Sobic006G096500--Sobic003G006100 Sobic006G096500--Sobic005G130600 Sobic008G057100 Sobic008G057100 Sobic006G096500--Sobic008G057100 Sobic001G208600 Sobic001G208600 Sobic006G096500--Sobic001G208600 Sobic001G046800--Sobic010G047600 Sobic001G046800--Sobic001G261460 Sobic010G106700 Sobic010G106700 Sobic001G046800--Sobic010G106700 Sobic002G053900 Sobic002G053900 Sobic001G046800--Sobic002G053900 Sobic009G008800 Sobic009G008800 Sobic001G046800--Sobic009G008800 Sobic001G046800--Sobic001G484000 Sobic001G046800--Sobic010G014400 Sobic001G046800--Sobic003G321400 Sobic003G250700 Sobic003G250700 Sobic001G046800--Sobic003G250700 Sobic001G099600--Sobic003G269100 Sobic001G099600--Sobic003G321400 Sobic001G099600--Sobic001G264400 Sobic001G099600--Sobic004G297950 Sobic001G265800 Sobic001G265800 Sobic001G099600--Sobic001G265800 Sobic001G099600--Sobic003G115200 Sobic001G099600--Sobic009G221800 Sobic001G099600--Sobic010G047600 Sobic001G099600--Sobic003G000200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.