Gene annotation
Transcriptome id Sobic.003G115200.1
Synonym Sb03g009710
Functional annotation expressed protein
UniProt C5XFT6
Pfam PF06749
Panther DB PTHR31769 PTHR31769:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G49320 : Protein of unknown function (DUF1218)
RAP-DB (Rice) LOC_Os01g14960.1 : expressed protein
MaizeGDB (Corn) Zm00025a023943
Brachypodium -
Barley HORVU3Hr1G034760.9 , HORVU3Hr1G034760.8 , HORVU3Hr1G034760.7 , HORVU3Hr1G034760.6 , HORVU3Hr1G034760.5 , HORVU3Hr1G034760.4 , HORVU3Hr1G034760.3 , HORVU3Hr1G034760.1
Wheat TraesCS3A02G172100 , TraesCS3B02G202900 , TraesCS3B02G202900 , TraesCS3D02G178600 , TraesCS3D02G178600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.003G000200 AWPM-19-like membrane family protein, putative, expressed -
3 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
4 Sobic.001G261460 - -
5 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
6 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
7 Sobic.010G014400 - -
8 Sobic.009G130300 AWPM-19-like membrane family protein, putative, expressed -
9 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
12 Sobic.003G078900 reticulon domain containing protein, putative, expressed -
13 Sobic.004G170800 serine-aspartate repeat-containing protein I precursor, putative, expressed -
14 Sobic.003G250700 fasciclin domain containing protein, expressed -
15 Sobic.001G156500 AGC_PVPK_like_kin82y.9 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
16 Sobic.003G121000 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.004G050700 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.001G264300 hsp20/alpha crystallin family protein, putative, expressed -
19 Sobic.001G245800 expressed protein -
20 Sobic.004G297950 - -


Gene co-expression network
sample Sobic003G115200 Sobic003G115200 Sobic003G321400 Sobic003G321400 Sobic003G115200--Sobic003G321400 Sobic003G000200 Sobic003G000200 Sobic003G115200--Sobic003G000200 Sobic003G269100 Sobic003G269100 Sobic003G115200--Sobic003G269100 Sobic001G261460 Sobic001G261460 Sobic003G115200--Sobic001G261460 Sobic010G047600 Sobic010G047600 Sobic003G115200--Sobic010G047600 Sobic009G221800 Sobic009G221800 Sobic003G115200--Sobic009G221800 Sobic010G014400 Sobic010G014400 Sobic003G115200--Sobic010G014400 Sobic009G130300 Sobic009G130300 Sobic003G115200--Sobic009G130300 Sobic001G514200 Sobic001G514200 Sobic003G115200--Sobic001G514200 Sobic003G321400--Sobic003G269100 Sobic003G321400--Sobic003G115200 Sobic003G321400--Sobic009G221800 Sobic003G321400--Sobic010G047600 Sobic003G321400--Sobic003G000200 Sobic003G078900 Sobic003G078900 Sobic003G321400--Sobic003G078900 Sobic003G321400--Sobic001G261460 Sobic001G264400 Sobic001G264400 Sobic003G321400--Sobic001G264400 Sobic001G099600 Sobic001G099600 Sobic003G321400--Sobic001G099600 Sobic003G000200--Sobic009G130300 Sobic003G000200--Sobic003G321400 Sobic003G000200--Sobic003G078900 Sobic003G000200--Sobic001G261460 Sobic003G000200--Sobic009G221800 Sobic003G000200--Sobic003G115200 Sobic003G000200--Sobic010G047600 Sobic003G201200 Sobic003G201200 Sobic003G000200--Sobic003G201200 Sobic003G250700 Sobic003G250700 Sobic003G000200--Sobic003G250700 Sobic003G269100--Sobic003G321400 Sobic003G269100--Sobic001G099600 Sobic004G297950 Sobic004G297950 Sobic003G269100--Sobic004G297950 Sobic003G269100--Sobic003G115200 Sobic003G269100--Sobic010G047600 Sobic003G269100--Sobic001G261460 Sobic003G269100--Sobic001G264400 Sobic001G484000 Sobic001G484000 Sobic003G269100--Sobic001G484000 Sobic001G046800 Sobic001G046800 Sobic003G269100--Sobic001G046800 Sobic001G261460--Sobic010G047600 Sobic001G261460--Sobic001G514200 Sobic001G261460--Sobic001G046800 Sobic001G261460--Sobic009G221800 Sobic001G261460--Sobic003G000200 Sobic001G261460--Sobic003G321400 Sobic005G061200 Sobic005G061200 Sobic001G261460--Sobic005G061200 Sobic001G261460--Sobic003G115200 Sobic001G261460--Sobic010G014400 Sobic010G047600--Sobic001G261460 Sobic010G047600--Sobic001G046800 Sobic010G047600--Sobic003G321400 Sobic010G047600--Sobic009G221800 Sobic010G047600--Sobic001G514200 Sobic010G047600--Sobic003G078900 Sobic010G047600--Sobic003G000200 Sobic010G047600--Sobic003G115200 Sobic004G050700 Sobic004G050700 Sobic010G047600--Sobic004G050700 Sobic009G221800--Sobic003G078900 Sobic009G221800--Sobic003G321400 Sobic009G221800--Sobic010G047600 Sobic009G221800--Sobic001G261460 Sobic009G221800--Sobic003G000200 Sobic009G221800--Sobic001G514200 Sobic001G264300 Sobic001G264300 Sobic009G221800--Sobic001G264300 Sobic009G221800--Sobic009G130300 Sobic009G221800--Sobic001G264400 Sobic010G014400--Sobic001G046800 Sobic010G014400--Sobic001G261460 Sobic010G014400--Sobic010G047600 Sobic010G014400--Sobic005G061200 Sobic010G014400--Sobic001G514200 Sobic001G059600 Sobic001G059600 Sobic010G014400--Sobic001G059600 Sobic010G014400--Sobic003G115200 Sobic001G250100 Sobic001G250100 Sobic010G014400--Sobic001G250100 Sobic010G138300 Sobic010G138300 Sobic010G014400--Sobic010G138300 Sobic009G130300--Sobic003G000200 Sobic009G130300--Sobic009G221800 Sobic009G130300--Sobic003G078900 Sobic001G310300 Sobic001G310300 Sobic009G130300--Sobic001G310300 Sobic009G130300--Sobic003G115200 Sobic009G130300--Sobic001G514200 Sobic009G130300--Sobic003G321400 Sobic009G130300--Sobic001G261460 Sobic009G130300--Sobic010G047600 Sobic008G055100 Sobic008G055100 Sobic001G514200--Sobic008G055100 Sobic001G514200--Sobic010G047600 Sobic001G514200--Sobic001G261460 Sobic001G514200--Sobic001G310300 Sobic001G514200--Sobic010G138300 Sobic001G514200--Sobic009G221800 Sobic001G514200--Sobic005G061200 Sobic007G176000 Sobic007G176000 Sobic001G514200--Sobic007G176000 Sobic002G154600 Sobic002G154600 Sobic001G514200--Sobic002G154600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.