Gene annotation
Transcriptome id Sobic.003G078900.1
Synonym Sb03g006660
Functional annotation reticulon domain containing protein, putative, expressed
UniProt C5XQP5
Pfam PF02453
Panther DB PTHR10994 PTHR10994:SF74
NCBI CDD KOG1792; Reticulon
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18260 : Reticulon family protein
RAP-DB (Rice) LOC_Os01g04640.1 : reticulon domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK02597
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
2 Sobic.003G000200 AWPM-19-like membrane family protein, putative, expressed -
3 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
5 Sobic.003G201200 hsp20/alpha crystallin family protein, putative, expressed -
6 Sobic.001G261460 - -
7 Sobic.009G130300 AWPM-19-like membrane family protein, putative, expressed -
8 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.004G050700 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.003G115200 expressed protein -
11 Sobic.001G245800 expressed protein -
12 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.001G264300 hsp20/alpha crystallin family protein, putative, expressed -
14 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
15 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.003G430800 expressed protein -
17 Sobic.001G265800 hsp20/alpha crystallin family protein, putative, expressed -
18 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
19 Sobic.010G014400 - -
20 Sobic.003G250700 fasciclin domain containing protein, expressed -


Gene co-expression network
sample Sobic003G078900 Sobic003G078900 Sobic009G221800 Sobic009G221800 Sobic003G078900--Sobic009G221800 Sobic003G000200 Sobic003G000200 Sobic003G078900--Sobic003G000200 Sobic003G321400 Sobic003G321400 Sobic003G078900--Sobic003G321400 Sobic010G047600 Sobic010G047600 Sobic003G078900--Sobic010G047600 Sobic003G201200 Sobic003G201200 Sobic003G078900--Sobic003G201200 Sobic001G261460 Sobic001G261460 Sobic003G078900--Sobic001G261460 Sobic009G130300 Sobic009G130300 Sobic003G078900--Sobic009G130300 Sobic001G514200 Sobic001G514200 Sobic003G078900--Sobic001G514200 Sobic004G050700 Sobic004G050700 Sobic003G078900--Sobic004G050700 Sobic009G221800--Sobic003G078900 Sobic009G221800--Sobic003G321400 Sobic009G221800--Sobic010G047600 Sobic009G221800--Sobic001G261460 Sobic009G221800--Sobic003G000200 Sobic009G221800--Sobic001G514200 Sobic001G264300 Sobic001G264300 Sobic009G221800--Sobic001G264300 Sobic009G221800--Sobic009G130300 Sobic001G264400 Sobic001G264400 Sobic009G221800--Sobic001G264400 Sobic003G000200--Sobic009G130300 Sobic003G000200--Sobic003G321400 Sobic003G000200--Sobic003G078900 Sobic003G000200--Sobic001G261460 Sobic003G000200--Sobic009G221800 Sobic003G115200 Sobic003G115200 Sobic003G000200--Sobic003G115200 Sobic003G000200--Sobic010G047600 Sobic003G000200--Sobic003G201200 Sobic003G250700 Sobic003G250700 Sobic003G000200--Sobic003G250700 Sobic003G269100 Sobic003G269100 Sobic003G321400--Sobic003G269100 Sobic003G321400--Sobic003G115200 Sobic003G321400--Sobic009G221800 Sobic003G321400--Sobic010G047600 Sobic003G321400--Sobic003G000200 Sobic003G321400--Sobic003G078900 Sobic003G321400--Sobic001G261460 Sobic003G321400--Sobic001G264400 Sobic001G099600 Sobic001G099600 Sobic003G321400--Sobic001G099600 Sobic010G047600--Sobic001G261460 Sobic001G046800 Sobic001G046800 Sobic010G047600--Sobic001G046800 Sobic010G047600--Sobic003G321400 Sobic010G047600--Sobic009G221800 Sobic010G047600--Sobic001G514200 Sobic010G047600--Sobic003G078900 Sobic010G047600--Sobic003G000200 Sobic010G047600--Sobic003G115200 Sobic010G047600--Sobic004G050700 Sobic003G201200--Sobic003G078900 Sobic003G201200--Sobic003G000200 Sobic003G201200--Sobic009G221800 Sobic003G201200--Sobic010G047600 Sobic003G201200--Sobic001G261460 Sobic003G201200--Sobic003G321400 Sobic001G310300 Sobic001G310300 Sobic003G201200--Sobic001G310300 Sobic003G201200--Sobic009G130300 Sobic003G430800 Sobic003G430800 Sobic003G201200--Sobic003G430800 Sobic001G261460--Sobic010G047600 Sobic001G261460--Sobic001G514200 Sobic001G261460--Sobic001G046800 Sobic001G261460--Sobic009G221800 Sobic001G261460--Sobic003G000200 Sobic001G261460--Sobic003G321400 Sobic005G061200 Sobic005G061200 Sobic001G261460--Sobic005G061200 Sobic001G261460--Sobic003G115200 Sobic010G014400 Sobic010G014400 Sobic001G261460--Sobic010G014400 Sobic009G130300--Sobic003G000200 Sobic009G130300--Sobic009G221800 Sobic009G130300--Sobic003G078900 Sobic009G130300--Sobic001G310300 Sobic009G130300--Sobic003G115200 Sobic009G130300--Sobic001G514200 Sobic009G130300--Sobic003G321400 Sobic009G130300--Sobic001G261460 Sobic009G130300--Sobic010G047600 Sobic008G055100 Sobic008G055100 Sobic001G514200--Sobic008G055100 Sobic001G514200--Sobic010G047600 Sobic001G514200--Sobic001G261460 Sobic001G514200--Sobic001G310300 Sobic010G138300 Sobic010G138300 Sobic001G514200--Sobic010G138300 Sobic001G514200--Sobic009G221800 Sobic001G514200--Sobic005G061200 Sobic007G176000 Sobic007G176000 Sobic001G514200--Sobic007G176000 Sobic002G154600 Sobic002G154600 Sobic001G514200--Sobic002G154600 Sobic004G050700--Sobic010G047600 Sobic004G050700--Sobic009G221800 Sobic004G050700--Sobic003G321400 Sobic004G050700--Sobic001G310300 Sobic004G050700--Sobic003G000200 Sobic004G050700--Sobic001G261460 Sobic004G050700--Sobic001G514200 Sobic004G050700--Sobic003G078900 Sobic004G050700--Sobic001G264300
Octagon: transcription factors


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