Gene annotation
Transcriptome id Sobic.003G000200.1
Synonym Sb03g000210
Functional annotation AWPM-19-like membrane family protein, putative, expressed
UniProt C5XJG3
Pfam PF05512
Panther DB PTHR33294 PTHR33294:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29520 : AWPM-19-like family protein
RAP-DB (Rice) LOC_Os01g14530.1 : AWPM-19-like membrane family protein, putative, expressed
MaizeGDB (Corn) Zm00025a022754
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G130300 AWPM-19-like membrane family protein, putative, expressed -
2 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.003G078900 reticulon domain containing protein, putative, expressed -
4 Sobic.001G261460 - -
5 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
6 Sobic.003G115200 expressed protein -
7 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
8 Sobic.003G201200 hsp20/alpha crystallin family protein, putative, expressed -
9 Sobic.003G250700 fasciclin domain containing protein, expressed -
10 Sobic.010G014400 - -
11 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.004G050700 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.005G061200 dirigent, putative, expressed -
14 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
17 Sobic.001G245800 expressed protein -
18 Sobic.003G430800 expressed protein -
19 Sobic.001G444800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
20 Sobic.001G156500 AGC_PVPK_like_kin82y.9 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic003G000200 Sobic003G000200 Sobic009G130300 Sobic009G130300 Sobic003G000200--Sobic009G130300 Sobic003G321400 Sobic003G321400 Sobic003G000200--Sobic003G321400 Sobic003G078900 Sobic003G078900 Sobic003G000200--Sobic003G078900 Sobic001G261460 Sobic001G261460 Sobic003G000200--Sobic001G261460 Sobic009G221800 Sobic009G221800 Sobic003G000200--Sobic009G221800 Sobic003G115200 Sobic003G115200 Sobic003G000200--Sobic003G115200 Sobic010G047600 Sobic010G047600 Sobic003G000200--Sobic010G047600 Sobic003G201200 Sobic003G201200 Sobic003G000200--Sobic003G201200 Sobic003G250700 Sobic003G250700 Sobic003G000200--Sobic003G250700 Sobic009G130300--Sobic003G000200 Sobic009G130300--Sobic009G221800 Sobic009G130300--Sobic003G078900 Sobic001G310300 Sobic001G310300 Sobic009G130300--Sobic001G310300 Sobic009G130300--Sobic003G115200 Sobic001G514200 Sobic001G514200 Sobic009G130300--Sobic001G514200 Sobic009G130300--Sobic003G321400 Sobic009G130300--Sobic001G261460 Sobic009G130300--Sobic010G047600 Sobic003G269100 Sobic003G269100 Sobic003G321400--Sobic003G269100 Sobic003G321400--Sobic003G115200 Sobic003G321400--Sobic009G221800 Sobic003G321400--Sobic010G047600 Sobic003G321400--Sobic003G000200 Sobic003G321400--Sobic003G078900 Sobic003G321400--Sobic001G261460 Sobic001G264400 Sobic001G264400 Sobic003G321400--Sobic001G264400 Sobic001G099600 Sobic001G099600 Sobic003G321400--Sobic001G099600 Sobic003G078900--Sobic009G221800 Sobic003G078900--Sobic003G000200 Sobic003G078900--Sobic003G321400 Sobic003G078900--Sobic010G047600 Sobic003G078900--Sobic003G201200 Sobic003G078900--Sobic001G261460 Sobic003G078900--Sobic009G130300 Sobic003G078900--Sobic001G514200 Sobic004G050700 Sobic004G050700 Sobic003G078900--Sobic004G050700 Sobic001G261460--Sobic010G047600 Sobic001G261460--Sobic001G514200 Sobic001G046800 Sobic001G046800 Sobic001G261460--Sobic001G046800 Sobic001G261460--Sobic009G221800 Sobic001G261460--Sobic003G000200 Sobic001G261460--Sobic003G321400 Sobic005G061200 Sobic005G061200 Sobic001G261460--Sobic005G061200 Sobic001G261460--Sobic003G115200 Sobic010G014400 Sobic010G014400 Sobic001G261460--Sobic010G014400 Sobic009G221800--Sobic003G078900 Sobic009G221800--Sobic003G321400 Sobic009G221800--Sobic010G047600 Sobic009G221800--Sobic001G261460 Sobic009G221800--Sobic003G000200 Sobic009G221800--Sobic001G514200 Sobic001G264300 Sobic001G264300 Sobic009G221800--Sobic001G264300 Sobic009G221800--Sobic009G130300 Sobic009G221800--Sobic001G264400 Sobic003G115200--Sobic003G321400 Sobic003G115200--Sobic003G000200 Sobic003G115200--Sobic003G269100 Sobic003G115200--Sobic001G261460 Sobic003G115200--Sobic010G047600 Sobic003G115200--Sobic009G221800 Sobic003G115200--Sobic010G014400 Sobic003G115200--Sobic009G130300 Sobic003G115200--Sobic001G514200 Sobic010G047600--Sobic001G261460 Sobic010G047600--Sobic001G046800 Sobic010G047600--Sobic003G321400 Sobic010G047600--Sobic009G221800 Sobic010G047600--Sobic001G514200 Sobic010G047600--Sobic003G078900 Sobic010G047600--Sobic003G000200 Sobic010G047600--Sobic003G115200 Sobic010G047600--Sobic004G050700 Sobic003G201200--Sobic003G078900 Sobic003G201200--Sobic003G000200 Sobic003G201200--Sobic009G221800 Sobic003G201200--Sobic010G047600 Sobic003G201200--Sobic001G261460 Sobic003G201200--Sobic003G321400 Sobic003G201200--Sobic001G310300 Sobic003G201200--Sobic009G130300 Sobic003G430800 Sobic003G430800 Sobic003G201200--Sobic003G430800 Sobic001G107100 Sobic001G107100 Sobic003G250700--Sobic001G107100 Sobic001G038300 Sobic001G038300 Sobic003G250700--Sobic001G038300 Sobic003G250700--Sobic001G046800 Sobic003G250700--Sobic003G000200 Sobic003G250700--Sobic010G047600 Sobic003G250700--Sobic003G321400 Sobic003G250700--Sobic010G014400 Sobic004G170800 Sobic004G170800 Sobic003G250700--Sobic004G170800 Sobic001G156500 Sobic001G156500 Sobic003G250700--Sobic001G156500
Octagon: transcription factors


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