Gene annotation
Transcriptome id Sobic.001G245800.1
Synonym Sb01g021740
Functional annotation expressed protein
UniProt C5X1I4
Pfam PF07911
Panther DB PTHR33108 PTHR33108:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22540 : Protein of unknown function (DUF1677)
RAP-DB (Rice) LOC_Os10g28700.1 : expressed protein
MaizeGDB (Corn) Zm00025a006903
Brachypodium PNT78150
Barley HORVU4Hr1G073310.1 , HORVU4Hr1G073310.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G138300 DUF617 domain containing protein, expressed -
2 Sobic.009G074500 expressed protein -
3 Sobic.001G261460 - -
4 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
5 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.009G199001 - -
7 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
8 Sobic.008G102800 expressed protein -
9 Sobic.004G170800 serine-aspartate repeat-containing protein I precursor, putative, expressed -
10 Sobic.009G221500 lipid phosphatase protein, putative, expressed -
11 Sobic.010G014400 - -
12 Sobic.003G000200 AWPM-19-like membrane family protein, putative, expressed -
13 Sobic.003G078900 reticulon domain containing protein, putative, expressed -
14 Sobic.008G135300 thaumatin family domain containing protein, expressed -
15 Sobic.006G260200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
16 Sobic.006G119000 X8 domain containing protein, expressed -
17 Sobic.007G154200 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
18 Sobic.003G052900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@-(PubMedID : 23108465)@LOB family(PubMedID : 16399802)@DUF260 domain containing protein, putative, expressed -
19 Sobic.003G236600 expressed protein -
20 Sobic.003G115200 expressed protein -


Gene co-expression network
sample Sobic001G245800 Sobic001G245800 Sobic010G138300 Sobic010G138300 Sobic001G245800--Sobic010G138300 Sobic009G074500 Sobic009G074500 Sobic001G245800--Sobic009G074500 Sobic001G261460 Sobic001G261460 Sobic001G245800--Sobic001G261460 Sobic010G047600 Sobic010G047600 Sobic001G245800--Sobic010G047600 Sobic001G514200 Sobic001G514200 Sobic001G245800--Sobic001G514200 Sobic009G199001 Sobic009G199001 Sobic001G245800--Sobic009G199001 Sobic009G221800 Sobic009G221800 Sobic001G245800--Sobic009G221800 Sobic008G102800 Sobic008G102800 Sobic001G245800--Sobic008G102800 Sobic004G170800 Sobic004G170800 Sobic001G245800--Sobic004G170800 Sobic010G138300--Sobic001G514200 Sobic010G138300--Sobic009G199001 Sobic010G138300--Sobic008G102800 Sobic009G221500 Sobic009G221500 Sobic010G138300--Sobic009G221500 Sobic010G138300--Sobic001G245800 Sobic010G138300--Sobic009G074500 Sobic003G340100 Sobic003G340100 Sobic010G138300--Sobic003G340100 Sobic007G050200 Sobic007G050200 Sobic010G138300--Sobic007G050200 Sobic006G227500 Sobic006G227500 Sobic010G138300--Sobic006G227500 Sobic004G322800 Sobic004G322800 Sobic009G074500--Sobic004G322800 Sobic009G074500--Sobic009G199001 Sobic002G042200 Sobic002G042200 Sobic009G074500--Sobic002G042200 Sobic010G148800 Sobic010G148800 Sobic009G074500--Sobic010G148800 Sobic004G209400 Sobic004G209400 Sobic009G074500--Sobic004G209400 Sobic009G074500--Sobic009G221500 Sobic003G020200 Sobic003G020200 Sobic009G074500--Sobic003G020200 Sobic003G282200 Sobic003G282200 Sobic009G074500--Sobic003G282200 Sobic009G074500--Sobic010G138300 Sobic001G261460--Sobic010G047600 Sobic001G261460--Sobic001G514200 Sobic001G046800 Sobic001G046800 Sobic001G261460--Sobic001G046800 Sobic001G261460--Sobic009G221800 Sobic003G000200 Sobic003G000200 Sobic001G261460--Sobic003G000200 Sobic003G321400 Sobic003G321400 Sobic001G261460--Sobic003G321400 Sobic005G061200 Sobic005G061200 Sobic001G261460--Sobic005G061200 Sobic003G115200 Sobic003G115200 Sobic001G261460--Sobic003G115200 Sobic010G014400 Sobic010G014400 Sobic001G261460--Sobic010G014400 Sobic010G047600--Sobic001G261460 Sobic010G047600--Sobic001G046800 Sobic010G047600--Sobic003G321400 Sobic010G047600--Sobic009G221800 Sobic010G047600--Sobic001G514200 Sobic003G078900 Sobic003G078900 Sobic010G047600--Sobic003G078900 Sobic010G047600--Sobic003G000200 Sobic010G047600--Sobic003G115200 Sobic004G050700 Sobic004G050700 Sobic010G047600--Sobic004G050700 Sobic008G055100 Sobic008G055100 Sobic001G514200--Sobic008G055100 Sobic001G514200--Sobic010G047600 Sobic001G514200--Sobic001G261460 Sobic001G310300 Sobic001G310300 Sobic001G514200--Sobic001G310300 Sobic001G514200--Sobic010G138300 Sobic001G514200--Sobic009G221800 Sobic001G514200--Sobic005G061200 Sobic007G176000 Sobic007G176000 Sobic001G514200--Sobic007G176000 Sobic002G154600 Sobic002G154600 Sobic001G514200--Sobic002G154600 Sobic009G219200 Sobic009G219200 Sobic009G199001--Sobic009G219200 Sobic009G199001--Sobic010G148800 Sobic001G058300 Sobic001G058300 Sobic009G199001--Sobic001G058300 Sobic003G140700 Sobic003G140700 Sobic009G199001--Sobic003G140700 Sobic006G256900 Sobic006G256900 Sobic009G199001--Sobic006G256900 Sobic009G199001--Sobic007G050200 Sobic001G438200 Sobic001G438200 Sobic009G199001--Sobic001G438200 Sobic009G199001--Sobic004G209400 Sobic009G199001--Sobic009G074500 Sobic009G221800--Sobic003G078900 Sobic009G221800--Sobic003G321400 Sobic009G221800--Sobic010G047600 Sobic009G221800--Sobic001G261460 Sobic009G221800--Sobic003G000200 Sobic009G221800--Sobic001G514200 Sobic001G264300 Sobic001G264300 Sobic009G221800--Sobic001G264300 Sobic009G130300 Sobic009G130300 Sobic009G221800--Sobic009G130300 Sobic001G264400 Sobic001G264400 Sobic009G221800--Sobic001G264400 Sobic008G102800--Sobic006G256900 Sobic003G236600 Sobic003G236600 Sobic008G102800--Sobic003G236600 Sobic002G001700 Sobic002G001700 Sobic008G102800--Sobic002G001700 Sobic001G430100 Sobic001G430100 Sobic008G102800--Sobic001G430100 Sobic008G102800--Sobic009G221500 Sobic006G197100 Sobic006G197100 Sobic008G102800--Sobic006G197100 Sobic008G102800--Sobic010G138300 Sobic008G102800--Sobic009G199001 Sobic001G264000 Sobic001G264000 Sobic008G102800--Sobic001G264000 Sobic004G170800--Sobic001G264400 Sobic004G170800--Sobic001G245800 Sobic003G250700 Sobic003G250700 Sobic004G170800--Sobic003G250700 Sobic005G142500 Sobic005G142500 Sobic004G170800--Sobic005G142500 Sobic004G170800--Sobic003G115200 Sobic004G170800--Sobic009G221800 Sobic004G170800--Sobic001G264300 Sobic005G047100 Sobic005G047100 Sobic004G170800--Sobic005G047100 Sobic004G170800--Sobic003G321400
Octagon: transcription factors


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