Gene annotation
Transcriptome id Sobic.003G201200.1
Synonym RTM2, Sb03g026330
Functional annotation hsp20/alpha crystallin family protein, putative, expressed
UniProt C5XPG5
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF129
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G04890 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os05g51440.1 : hsp20/alpha crystallin family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G078900 reticulon domain containing protein, putative, expressed -
2 Sobic.003G000200 AWPM-19-like membrane family protein, putative, expressed -
3 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
4 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
5 Sobic.001G261460 - -
6 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.009G130300 AWPM-19-like membrane family protein, putative, expressed -
9 Sobic.003G430800 expressed protein -
10 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.004G050700 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.002G053900 Cupin domain containing protein, expressed -
13 Sobic.001G444800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
14 Sobic.005G061200 dirigent, putative, expressed -
15 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.002G244300 fasciclin domain containing protein, expressed -
17 Sobic.001G264300 hsp20/alpha crystallin family protein, putative, expressed -
18 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
19 Sobic.003G206700 heavy metal-associated domain containing protein, expressed -
20 Sobic.003G250700 fasciclin domain containing protein, expressed -


Gene co-expression network
sample Sobic003G201200 Sobic003G201200 Sobic003G078900 Sobic003G078900 Sobic003G201200--Sobic003G078900 Sobic003G000200 Sobic003G000200 Sobic003G201200--Sobic003G000200 Sobic009G221800 Sobic009G221800 Sobic003G201200--Sobic009G221800 Sobic010G047600 Sobic010G047600 Sobic003G201200--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic003G201200--Sobic001G261460 Sobic003G321400 Sobic003G321400 Sobic003G201200--Sobic003G321400 Sobic001G310300 Sobic001G310300 Sobic003G201200--Sobic001G310300 Sobic009G130300 Sobic009G130300 Sobic003G201200--Sobic009G130300 Sobic003G430800 Sobic003G430800 Sobic003G201200--Sobic003G430800 Sobic003G078900--Sobic009G221800 Sobic003G078900--Sobic003G000200 Sobic003G078900--Sobic003G321400 Sobic003G078900--Sobic010G047600 Sobic003G078900--Sobic003G201200 Sobic003G078900--Sobic001G261460 Sobic003G078900--Sobic009G130300 Sobic001G514200 Sobic001G514200 Sobic003G078900--Sobic001G514200 Sobic004G050700 Sobic004G050700 Sobic003G078900--Sobic004G050700 Sobic003G000200--Sobic009G130300 Sobic003G000200--Sobic003G321400 Sobic003G000200--Sobic003G078900 Sobic003G000200--Sobic001G261460 Sobic003G000200--Sobic009G221800 Sobic003G115200 Sobic003G115200 Sobic003G000200--Sobic003G115200 Sobic003G000200--Sobic010G047600 Sobic003G000200--Sobic003G201200 Sobic003G250700 Sobic003G250700 Sobic003G000200--Sobic003G250700 Sobic009G221800--Sobic003G078900 Sobic009G221800--Sobic003G321400 Sobic009G221800--Sobic010G047600 Sobic009G221800--Sobic001G261460 Sobic009G221800--Sobic003G000200 Sobic009G221800--Sobic001G514200 Sobic001G264300 Sobic001G264300 Sobic009G221800--Sobic001G264300 Sobic009G221800--Sobic009G130300 Sobic001G264400 Sobic001G264400 Sobic009G221800--Sobic001G264400 Sobic010G047600--Sobic001G261460 Sobic001G046800 Sobic001G046800 Sobic010G047600--Sobic001G046800 Sobic010G047600--Sobic003G321400 Sobic010G047600--Sobic009G221800 Sobic010G047600--Sobic001G514200 Sobic010G047600--Sobic003G078900 Sobic010G047600--Sobic003G000200 Sobic010G047600--Sobic003G115200 Sobic010G047600--Sobic004G050700 Sobic001G261460--Sobic010G047600 Sobic001G261460--Sobic001G514200 Sobic001G261460--Sobic001G046800 Sobic001G261460--Sobic009G221800 Sobic001G261460--Sobic003G000200 Sobic001G261460--Sobic003G321400 Sobic005G061200 Sobic005G061200 Sobic001G261460--Sobic005G061200 Sobic001G261460--Sobic003G115200 Sobic010G014400 Sobic010G014400 Sobic001G261460--Sobic010G014400 Sobic003G269100 Sobic003G269100 Sobic003G321400--Sobic003G269100 Sobic003G321400--Sobic003G115200 Sobic003G321400--Sobic009G221800 Sobic003G321400--Sobic010G047600 Sobic003G321400--Sobic003G000200 Sobic003G321400--Sobic003G078900 Sobic003G321400--Sobic001G261460 Sobic003G321400--Sobic001G264400 Sobic001G099600 Sobic001G099600 Sobic003G321400--Sobic001G099600 Sobic006G203700 Sobic006G203700 Sobic001G310300--Sobic006G203700 Sobic010G085800 Sobic010G085800 Sobic001G310300--Sobic010G085800 Sobic001G310300--Sobic001G514200 Sobic008G055100 Sobic008G055100 Sobic001G310300--Sobic008G055100 Sobic001G481000 Sobic001G481000 Sobic001G310300--Sobic001G481000 Sobic009G109000 Sobic009G109000 Sobic001G310300--Sobic009G109000 Sobic010G008400 Sobic010G008400 Sobic001G310300--Sobic010G008400 Sobic008G005100 Sobic008G005100 Sobic001G310300--Sobic008G005100 Sobic003G160700 Sobic003G160700 Sobic001G310300--Sobic003G160700 Sobic009G130300--Sobic003G000200 Sobic009G130300--Sobic009G221800 Sobic009G130300--Sobic003G078900 Sobic009G130300--Sobic001G310300 Sobic009G130300--Sobic003G115200 Sobic009G130300--Sobic001G514200 Sobic009G130300--Sobic003G321400 Sobic009G130300--Sobic001G261460 Sobic009G130300--Sobic010G047600 Sobic003G430800--Sobic003G000200 Sobic003G430800--Sobic001G261460 Sobic005G043000 Sobic005G043000 Sobic003G430800--Sobic005G043000 Sobic003G430800--Sobic001G310300 Sobic003G430800--Sobic003G078900 Sobic002G310600 Sobic002G310600 Sobic003G430800--Sobic002G310600 Sobic003G430800--Sobic003G201200 Sobic001G147900 Sobic001G147900 Sobic003G430800--Sobic001G147900 Sobic003G430800--Sobic010G047600
Octagon: transcription factors


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