Gene annotation
Transcriptome id Sobic.003G250700.1
Synonym ATFLA11, Sb03g030690, FLA11
Functional annotation fasciclin domain containing protein, expressed
UniProt C5XG11
Pfam PF02469
Panther DB PTHR32077 PTHR32077:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03170 : FASCICLIN-like arabinogalactan-protein 11
RAP-DB (Rice) LOC_Os01g47780.1 : fasciclin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028119 , Zm00025a036603
Brachypodium KQK04883 , KQK09116
Barley HORVU3Hr1G061130.1 , HORVU3Hr1G061130.2 , HORVU3Hr1G061130.3 , HORVU1Hr1G087530.2 , HORVU1Hr1G087530.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G250700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
2 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
3 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.003G000200 AWPM-19-like membrane family protein, putative, expressed -
5 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
6 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.010G014400 - -
8 Sobic.004G170800 serine-aspartate repeat-containing protein I precursor, putative, expressed -
9 Sobic.001G156500 AGC_PVPK_like_kin82y.9 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
10 Sobic.003G115200 expressed protein -
11 Sobic.007G090436 - K08235: xyloglucan:xyloglucosyl transferase
12 Sobic.006G278100 expressed protein -
13 Sobic.002G350400 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
14 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote
15 Sobic.001G261460 - -
16 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
17 Sobic.001G521300 expressed protein -
18 Sobic.003G078900 reticulon domain containing protein, putative, expressed -
19 Sobic.009G232100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
20 Sobic.007G150800 expressed protein -


Gene co-expression network
sample Sobic003G250700 Sobic003G250700 Sobic001G107100 Sobic001G107100 Sobic003G250700--Sobic001G107100 Sobic001G038300 Sobic001G038300 Sobic003G250700--Sobic001G038300 Sobic001G046800 Sobic001G046800 Sobic003G250700--Sobic001G046800 Sobic003G000200 Sobic003G000200 Sobic003G250700--Sobic003G000200 Sobic010G047600 Sobic010G047600 Sobic003G250700--Sobic010G047600 Sobic003G321400 Sobic003G321400 Sobic003G250700--Sobic003G321400 Sobic010G014400 Sobic010G014400 Sobic003G250700--Sobic010G014400 Sobic004G170800 Sobic004G170800 Sobic003G250700--Sobic004G170800 Sobic001G156500 Sobic001G156500 Sobic003G250700--Sobic001G156500 Sobic001G107100--Sobic001G038300 Sobic001G107100--Sobic003G250700 Sobic002G396400 Sobic002G396400 Sobic001G107100--Sobic002G396400 Sobic001G107200 Sobic001G107200 Sobic001G107100--Sobic001G107200 Sobic002G333800 Sobic002G333800 Sobic001G107100--Sobic002G333800 Sobic002G252000 Sobic002G252000 Sobic001G107100--Sobic002G252000 Sobic006G278100 Sobic006G278100 Sobic001G107100--Sobic006G278100 Sobic001G107100--Sobic001G156500 Sobic007G090436 Sobic007G090436 Sobic001G107100--Sobic007G090436 Sobic001G038300--Sobic002G396400 Sobic001G038300--Sobic001G107100 Sobic001G038300--Sobic003G250700 Sobic001G418100 Sobic001G418100 Sobic001G038300--Sobic001G418100 Sobic001G038300--Sobic010G047600 Sobic001G434300 Sobic001G434300 Sobic001G038300--Sobic001G434300 Sobic001G475500 Sobic001G475500 Sobic001G038300--Sobic001G475500 Sobic007G150800 Sobic007G150800 Sobic001G038300--Sobic007G150800 Sobic003G122200 Sobic003G122200 Sobic001G038300--Sobic003G122200 Sobic001G046800--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic001G046800--Sobic001G261460 Sobic010G106700 Sobic010G106700 Sobic001G046800--Sobic010G106700 Sobic002G053900 Sobic002G053900 Sobic001G046800--Sobic002G053900 Sobic009G008800 Sobic009G008800 Sobic001G046800--Sobic009G008800 Sobic001G484000 Sobic001G484000 Sobic001G046800--Sobic001G484000 Sobic001G046800--Sobic010G014400 Sobic001G046800--Sobic003G321400 Sobic001G046800--Sobic003G250700 Sobic009G130300 Sobic009G130300 Sobic003G000200--Sobic009G130300 Sobic003G000200--Sobic003G321400 Sobic003G078900 Sobic003G078900 Sobic003G000200--Sobic003G078900 Sobic003G000200--Sobic001G261460 Sobic009G221800 Sobic009G221800 Sobic003G000200--Sobic009G221800 Sobic003G115200 Sobic003G115200 Sobic003G000200--Sobic003G115200 Sobic003G000200--Sobic010G047600 Sobic003G201200 Sobic003G201200 Sobic003G000200--Sobic003G201200 Sobic003G000200--Sobic003G250700 Sobic010G047600--Sobic001G261460 Sobic010G047600--Sobic001G046800 Sobic010G047600--Sobic003G321400 Sobic010G047600--Sobic009G221800 Sobic001G514200 Sobic001G514200 Sobic010G047600--Sobic001G514200 Sobic010G047600--Sobic003G078900 Sobic010G047600--Sobic003G000200 Sobic010G047600--Sobic003G115200 Sobic004G050700 Sobic004G050700 Sobic010G047600--Sobic004G050700 Sobic003G269100 Sobic003G269100 Sobic003G321400--Sobic003G269100 Sobic003G321400--Sobic003G115200 Sobic003G321400--Sobic009G221800 Sobic003G321400--Sobic010G047600 Sobic003G321400--Sobic003G000200 Sobic003G321400--Sobic003G078900 Sobic003G321400--Sobic001G261460 Sobic001G264400 Sobic001G264400 Sobic003G321400--Sobic001G264400 Sobic001G099600 Sobic001G099600 Sobic003G321400--Sobic001G099600 Sobic010G014400--Sobic001G046800 Sobic010G014400--Sobic001G261460 Sobic010G014400--Sobic010G047600 Sobic005G061200 Sobic005G061200 Sobic010G014400--Sobic005G061200 Sobic010G014400--Sobic001G514200 Sobic001G059600 Sobic001G059600 Sobic010G014400--Sobic001G059600 Sobic010G014400--Sobic003G115200 Sobic001G250100 Sobic001G250100 Sobic010G014400--Sobic001G250100 Sobic010G138300 Sobic010G138300 Sobic010G014400--Sobic010G138300 Sobic004G170800--Sobic001G264400 Sobic001G245800 Sobic001G245800 Sobic004G170800--Sobic001G245800 Sobic004G170800--Sobic003G250700 Sobic005G142500 Sobic005G142500 Sobic004G170800--Sobic005G142500 Sobic004G170800--Sobic003G115200 Sobic004G170800--Sobic009G221800 Sobic001G264300 Sobic001G264300 Sobic004G170800--Sobic001G264300 Sobic005G047100 Sobic005G047100 Sobic004G170800--Sobic005G047100 Sobic004G170800--Sobic003G321400 Sobic001G156500--Sobic003G250700 Sobic001G156500--Sobic010G047600 Sobic001G156500--Sobic003G115200 Sobic001G156500--Sobic003G000200 Sobic001G156500--Sobic001G261460 Sobic008G055100 Sobic008G055100 Sobic001G156500--Sobic008G055100 Sobic001G156500--Sobic010G014400 Sobic003G121000 Sobic003G121000 Sobic001G156500--Sobic003G121000 Sobic009G232100 Sobic009G232100 Sobic001G156500--Sobic009G232100
Octagon: transcription factors


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