Gene annotation
Transcriptome id Sobic.005G047100.1
Synonym Sb05g003880, ACT7
Functional annotation actin, putative, expressed
UniProt C5Y567
Pfam PF00022
Panther DB PTHR11937 PTHR11937:SF254
NCBI CDD -
KEGG Orthology K10355; actin, other eukaryote
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09810 : actin 7
RAP-DB (Rice) LOC_Os11g06390.6 : actin, putative, expressed
MaizeGDB (Corn) Zm00025a040979 , Zm00025a040977 , Zm00025a052678 , Zm00025a039570 , Zm00025a016937 , Zm00025a012921 , Zm00025a007893 , Zm00025a011910 , Zm00025a034168 , Zm00025a038281 , Zm00025a026721
Brachypodium PNT73248 , KQK13511 , KQJ85561 , KQK10759 , KQJ92134 , KQK08099
Barley HORVU3Hr1G083380.3 , HORVU3Hr1G083380.2 , HORVU3Hr1G083380.1 , HORVU3Hr1G083380.6 , HORVU3Hr1G083380.5 , HORVU3Hr1G083380.4 , HORVU4Hr1G008310.6 , HORVU4Hr1G008310.8 , HORVU5Hr1G039850.7 , HORVU1Hr1G047440.6 , HORVU1Hr1G047440.7 , HORVU1Hr1G047440.4 , HORVU1Hr1G047440.5 , HORVU1Hr1G047440.2 , HORVU1Hr1G047440.3 , HORVU1Hr1G047440.1 , HORVU5Hr1G039850.8 , HORVU4Hr1G008310.7 , HORVU4Hr1G008310.4 , HORVU4Hr1G008310.5 , HORVU4Hr1G008310.2 , HORVU4Hr1G008310.3 , HORVU4Hr1G008310.1 , HORVU5Hr1G039850.1 , HORVU5Hr1G039850.2 , HORVU5Hr1G039850.3 , HORVU5Hr1G039850.4 , HORVU5Hr1G039850.5 , HORVU5Hr1G039850.6 , HORVU4Hr1G008310.9 , HORVU5Hr1G000180.4 , HORVU5Hr1G000180.2 , HORVU5Hr1G000180.3 , HORVU5Hr1G000180.1 , HORVU5Hr1G117900.5 , HORVU5Hr1G117900.4 , HORVU5Hr1G117900.1 , HORVU5Hr1G117900.3 , HORVU5Hr1G117900.2
Wheat TraesCS5B02G124100 , TraesCS3B02G410000 , TraesCS3B02G410000 , TraesCS5A02G000400 , TraesCS4B02G050600 , TraesCS4B02G050600 , TraesCS4B02G050600 , TraesCS5D02G000400 , TraesCS4A02G356100 , TraesCS4A02G356100 , TraesCS5D02G516200 , TraesCS3A02G377300 , TraesCS5A02G124300 , TraesCS5A02G124300 , TraesCS5D02G132200 , TraesCS3D02G370400 , TraesCS3D02G370400 , TraesCS3D02G370400 , TraesCS5B02G516100
Populus PNT57598 , PNT17720 , PNS97854 , PNT57597 , PNS89844 , PNT57599 , PNT57600 , PNT57601 , PNT57602 , PNT57603 , PNS97853 , PNT32494 , PNT32495 , PNT22925 , PNT22924 , PNT22921 , PNT22923 , PNT22922


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G297950 - -
2 Sobic.003G247600 serine/threonine-protein kinase, putative, expressed -
3 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
4 Sobic.004G170900 expressed protein -
5 Sobic.001G521300 expressed protein -
6 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.004G170800 serine-aspartate repeat-containing protein I precursor, putative, expressed -
8 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
9 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
10 Sobic.003G250700 fasciclin domain containing protein, expressed -
11 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
12 Sobic.006G054600 OsGrx_C8 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
13 Sobic.010G216600 expressed protein -
14 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
15 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
16 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
17 Sobic.001G470100 OsFBX77 - F-box domain containing protein, expressed -
18 Sobic.002G350400 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
19 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
20 Sobic.002G280300 expressed protein -


Gene co-expression network
sample Sobic005G047100 Sobic005G047100 Sobic004G297950 Sobic004G297950 Sobic005G047100--Sobic004G297950 Sobic003G247600 Sobic003G247600 Sobic005G047100--Sobic003G247600 Sobic007G225400 Sobic007G225400 Sobic005G047100--Sobic007G225400 Sobic004G170900 Sobic004G170900 Sobic005G047100--Sobic004G170900 Sobic001G521300 Sobic001G521300 Sobic005G047100--Sobic001G521300 Sobic003G321400 Sobic003G321400 Sobic005G047100--Sobic003G321400 Sobic004G170800 Sobic004G170800 Sobic005G047100--Sobic004G170800 Sobic003G135400 Sobic003G135400 Sobic005G047100--Sobic003G135400 Sobic003G420100 Sobic003G420100 Sobic005G047100--Sobic003G420100 Sobic003G269100 Sobic003G269100 Sobic004G297950--Sobic003G269100 Sobic005G130600 Sobic005G130600 Sobic004G297950--Sobic005G130600 Sobic004G297950--Sobic003G321400 Sobic005G110600 Sobic005G110600 Sobic004G297950--Sobic005G110600 Sobic004G297950--Sobic005G047100 Sobic001G099600 Sobic001G099600 Sobic004G297950--Sobic001G099600 Sobic001G264400 Sobic001G264400 Sobic004G297950--Sobic001G264400 Sobic005G052500 Sobic005G052500 Sobic004G297950--Sobic005G052500 Sobic001G484000 Sobic001G484000 Sobic004G297950--Sobic001G484000 Sobic003G247600--Sobic005G047100 Sobic003G247600--Sobic003G420100 Sobic004G066900 Sobic004G066900 Sobic003G247600--Sobic004G066900 Sobic007G208100 Sobic007G208100 Sobic003G247600--Sobic007G208100 Sobic008G141200 Sobic008G141200 Sobic003G247600--Sobic008G141200 Sobic003G247600--Sobic003G135400 Sobic003G052900 Sobic003G052900 Sobic003G247600--Sobic003G052900 Sobic003G345700 Sobic003G345700 Sobic003G247600--Sobic003G345700 Sobic006G119000 Sobic006G119000 Sobic003G247600--Sobic006G119000 Sobic007G225400--Sobic004G170900 Sobic005G098400 Sobic005G098400 Sobic007G225400--Sobic005G098400 Sobic010G216600 Sobic010G216600 Sobic007G225400--Sobic010G216600 Sobic007G225400--Sobic005G047100 Sobic002G226500 Sobic002G226500 Sobic007G225400--Sobic002G226500 Sobic005G121700 Sobic005G121700 Sobic007G225400--Sobic005G121700 Sobic002G016400 Sobic002G016400 Sobic007G225400--Sobic002G016400 Sobic001G305300 Sobic001G305300 Sobic007G225400--Sobic001G305300 Sobic007G225400--Sobic001G264400 Sobic004G170900--Sobic007G225400 Sobic004G170900--Sobic010G216600 Sobic004G170900--Sobic005G047100 Sobic006G054600 Sobic006G054600 Sobic004G170900--Sobic006G054600 Sobic009G242501 Sobic009G242501 Sobic004G170900--Sobic009G242501 Sobic002G224200 Sobic002G224200 Sobic004G170900--Sobic002G224200 Sobic002G280300 Sobic002G280300 Sobic004G170900--Sobic002G280300 Sobic004G156900 Sobic004G156900 Sobic004G170900--Sobic004G156900 Sobic009G021700 Sobic009G021700 Sobic004G170900--Sobic009G021700 Sobic010G047600 Sobic010G047600 Sobic001G521300--Sobic010G047600 Sobic001G521300--Sobic005G047100 Sobic001G521300--Sobic003G321400 Sobic001G521300--Sobic003G269100 Sobic003G250700 Sobic003G250700 Sobic001G521300--Sobic003G250700 Sobic001G261460 Sobic001G261460 Sobic001G521300--Sobic001G261460 Sobic001G046800 Sobic001G046800 Sobic001G521300--Sobic001G046800 Sobic001G156500 Sobic001G156500 Sobic001G521300--Sobic001G156500 Sobic001G521300--Sobic006G119000 Sobic003G321400--Sobic003G269100 Sobic003G115200 Sobic003G115200 Sobic003G321400--Sobic003G115200 Sobic009G221800 Sobic009G221800 Sobic003G321400--Sobic009G221800 Sobic003G321400--Sobic010G047600 Sobic003G000200 Sobic003G000200 Sobic003G321400--Sobic003G000200 Sobic003G078900 Sobic003G078900 Sobic003G321400--Sobic003G078900 Sobic003G321400--Sobic001G261460 Sobic003G321400--Sobic001G264400 Sobic003G321400--Sobic001G099600 Sobic004G170800--Sobic001G264400 Sobic001G245800 Sobic001G245800 Sobic004G170800--Sobic001G245800 Sobic004G170800--Sobic003G250700 Sobic005G142500 Sobic005G142500 Sobic004G170800--Sobic005G142500 Sobic004G170800--Sobic003G115200 Sobic004G170800--Sobic009G221800 Sobic001G264300 Sobic001G264300 Sobic004G170800--Sobic001G264300 Sobic004G170800--Sobic005G047100 Sobic004G170800--Sobic003G321400 Sobic003G410600 Sobic003G410600 Sobic003G135400--Sobic003G410600 Sobic001G078600 Sobic001G078600 Sobic003G135400--Sobic001G078600 Sobic003G294500 Sobic003G294500 Sobic003G135400--Sobic003G294500 Sobic004G197400 Sobic004G197400 Sobic003G135400--Sobic004G197400 Sobic003G135400--Sobic008G141200 Sobic005G144600 Sobic005G144600 Sobic003G135400--Sobic005G144600 Sobic007G219400 Sobic007G219400 Sobic003G135400--Sobic007G219400 Sobic001G103000 Sobic001G103000 Sobic003G135400--Sobic001G103000 Sobic003G135400--Sobic005G047100 Sobic003G420100--Sobic003G247600 Sobic004G233700 Sobic004G233700 Sobic003G420100--Sobic004G233700 Sobic003G420100--Sobic009G242501 Sobic003G420100--Sobic007G208100 Sobic004G286700 Sobic004G286700 Sobic003G420100--Sobic004G286700 Sobic003G420100--Sobic005G047100 Sobic003G420100--Sobic008G141200 Sobic003G420100--Sobic004G066900 Sobic003G420100--Sobic003G135400
Octagon: transcription factors


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