Gene annotation
Transcriptome id Sobic.004G170900.1
Synonym Sb04g022210
Functional annotation expressed protein
UniProt C5XU44
Pfam -
Panther DB PTHR34662 PTHR34662:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g33790.1 : expressed protein
MaizeGDB (Corn) Zm00025a020603 , Zm00025a031562
Brachypodium PNT68794 , PNT68795
Barley -
Wheat TraesCS7A02G405700 , TraesCS7B02G305200 , TraesCS7D02G399600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
2 Sobic.010G216600 expressed protein -
3 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote
4 Sobic.006G054600 OsGrx_C8 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
5 Sobic.009G242501 - -
6 Sobic.002G224200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
7 Sobic.002G280300 expressed protein -
8 Sobic.004G156900 OsGrx_C8 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
9 Sobic.009G021700 expressed protein -
10 Sobic.006G245600 protein kinase domain containing protein, expressed -
11 Sobic.010G111200 "GASR7(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659934)@GASR7 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
12 Sobic.010G277300 "BRD2(Ortholog in rice:Hong et al., 2005)"(PubMedID : 31659939)@FAD-linked oxidoreductase protein, putative, expressed K09828: DHCR24, Delta24-sterol reductase
13 Sobic.002G247800 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL17 - SBP-box gene family member, expressed -
14 Sobic.001G382700 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
16 Sobic.004G297950 - -
17 Sobic.001G345200 OsFBX94 - F-box domain containing protein, expressed -
18 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
19 Sobic.002G016400 monocopper oxidase, putative, expressed -
20 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase


Gene co-expression network
sample Sobic004G170900 Sobic004G170900 Sobic007G225400 Sobic007G225400 Sobic004G170900--Sobic007G225400 Sobic010G216600 Sobic010G216600 Sobic004G170900--Sobic010G216600 Sobic005G047100 Sobic005G047100 Sobic004G170900--Sobic005G047100 Sobic006G054600 Sobic006G054600 Sobic004G170900--Sobic006G054600 Sobic009G242501 Sobic009G242501 Sobic004G170900--Sobic009G242501 Sobic002G224200 Sobic002G224200 Sobic004G170900--Sobic002G224200 Sobic002G280300 Sobic002G280300 Sobic004G170900--Sobic002G280300 Sobic004G156900 Sobic004G156900 Sobic004G170900--Sobic004G156900 Sobic009G021700 Sobic009G021700 Sobic004G170900--Sobic009G021700 Sobic007G225400--Sobic004G170900 Sobic005G098400 Sobic005G098400 Sobic007G225400--Sobic005G098400 Sobic007G225400--Sobic010G216600 Sobic007G225400--Sobic005G047100 Sobic002G226500 Sobic002G226500 Sobic007G225400--Sobic002G226500 Sobic005G121700 Sobic005G121700 Sobic007G225400--Sobic005G121700 Sobic002G016400 Sobic002G016400 Sobic007G225400--Sobic002G016400 Sobic001G305300 Sobic001G305300 Sobic007G225400--Sobic001G305300 Sobic001G264400 Sobic001G264400 Sobic007G225400--Sobic001G264400 Sobic003G338200 Sobic003G338200 Sobic010G216600--Sobic003G338200 Sobic010G216600--Sobic004G170900 Sobic010G216600--Sobic007G225400 Sobic010G111200 Sobic010G111200 Sobic010G216600--Sobic010G111200 Sobic002G419200 Sobic002G419200 Sobic010G216600--Sobic002G419200 Sobic003G277200 Sobic003G277200 Sobic010G216600--Sobic003G277200 Sobic010G216600--Sobic002G016400 Sobic003G116100 Sobic003G116100 Sobic010G216600--Sobic003G116100 Sobic001G382700 Sobic001G382700 Sobic010G216600--Sobic001G382700 Sobic004G297950 Sobic004G297950 Sobic005G047100--Sobic004G297950 Sobic003G247600 Sobic003G247600 Sobic005G047100--Sobic003G247600 Sobic005G047100--Sobic007G225400 Sobic005G047100--Sobic004G170900 Sobic001G521300 Sobic001G521300 Sobic005G047100--Sobic001G521300 Sobic003G321400 Sobic003G321400 Sobic005G047100--Sobic003G321400 Sobic004G170800 Sobic004G170800 Sobic005G047100--Sobic004G170800 Sobic003G135400 Sobic003G135400 Sobic005G047100--Sobic003G135400 Sobic003G420100 Sobic003G420100 Sobic005G047100--Sobic003G420100 Sobic006G054600--Sobic004G156900 Sobic006G054600--Sobic002G016400 Sobic006G054600--Sobic004G170900 Sobic006G054600--Sobic005G047100 Sobic009G061400 Sobic009G061400 Sobic006G054600--Sobic009G061400 Sobic006G054600--Sobic001G264400 Sobic006G054600--Sobic007G225400 Sobic006G054600--Sobic010G216600 Sobic006G054600--Sobic001G382700 Sobic009G242501--Sobic003G420100 Sobic009G242501--Sobic009G021700 Sobic009G242501--Sobic010G216600 Sobic009G242501--Sobic004G170900 Sobic008G039800 Sobic008G039800 Sobic009G242501--Sobic008G039800 Sobic007G208100 Sobic007G208100 Sobic009G242501--Sobic007G208100 Sobic009G242501--Sobic003G277200 Sobic004G233700 Sobic004G233700 Sobic009G242501--Sobic004G233700 Sobic003G013000 Sobic003G013000 Sobic009G242501--Sobic003G013000 Sobic005G091000 Sobic005G091000 Sobic002G224200--Sobic005G091000 Sobic001G381100 Sobic001G381100 Sobic002G224200--Sobic001G381100 Sobic006G105600 Sobic006G105600 Sobic002G224200--Sobic006G105600 Sobic004G168600 Sobic004G168600 Sobic002G224200--Sobic004G168600 Sobic001G267100 Sobic001G267100 Sobic002G224200--Sobic001G267100 Sobic006G074900 Sobic006G074900 Sobic002G224200--Sobic006G074900 Sobic002G394500 Sobic002G394500 Sobic002G224200--Sobic002G394500 Sobic008G190000 Sobic008G190000 Sobic002G224200--Sobic008G190000 Sobic001G160000 Sobic001G160000 Sobic002G224200--Sobic001G160000 Sobic002G280300--Sobic004G170900 Sobic002G280300--Sobic004G156900 Sobic002G280300--Sobic005G047100 Sobic002G280300--Sobic009G021700 Sobic002G280300--Sobic004G170800 Sobic001G107200 Sobic001G107200 Sobic002G280300--Sobic001G107200 Sobic002G280300--Sobic009G242501 Sobic001G528600 Sobic001G528600 Sobic002G280300--Sobic001G528600 Sobic008G143000 Sobic008G143000 Sobic002G280300--Sobic008G143000 Sobic004G156900--Sobic006G054600 Sobic004G156900--Sobic001G264400 Sobic004G156900--Sobic009G061400 Sobic004G156900--Sobic008G143000 Sobic005G110600 Sobic005G110600 Sobic004G156900--Sobic005G110600 Sobic008G077300 Sobic008G077300 Sobic004G156900--Sobic008G077300 Sobic004G156900--Sobic004G170800 Sobic004G156900--Sobic004G170900 Sobic004G156900--Sobic002G280300 Sobic009G021700--Sobic005G121700 Sobic009G021700--Sobic009G242501 Sobic009G021700--Sobic007G225400 Sobic009G021700--Sobic007G208100 Sobic009G021700--Sobic003G420100 Sobic009G021700--Sobic008G143000 Sobic009G021700--Sobic004G170900 Sobic009G021700--Sobic002G280300 Sobic009G021700--Sobic008G077300
Octagon: transcription factors


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