Gene annotation
Transcriptome id Sobic.002G247800.1
Synonym SPL9, SbSBP2, Sb02g028420
Functional annotation Highest expression level in primordial inflorescence (PubMedID : 27501690)
OsSPL17 - SBP-box gene family member, expressed
UniProt C5X3X7
Pfam PF03110
Panther DB PTHR31251 PTHR31251:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005634; nucleus GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G42200 : squamosa promoter binding protein-like 9
RAP-DB (Rice) LOC_Os09g31438.1 : OsSPL17 - SBP-box gene family member, expressed
MaizeGDB (Corn) Zm00025a033810 , Zm00025a047455 , Zm00025a005100 , Zm00025a014209
Brachypodium KQJ98926 , PNT68391 , PNT68392 , PNT68393 , KQJ90760 , KQJ90761
Barley HORVU5Hr1G073440.11 , HORVU5Hr1G073440.10 , HORVU5Hr1G073440.13 , HORVU5Hr1G073440.12 , HORVU3Hr1G050350.5 , HORVU3Hr1G050350.6 , HORVU3Hr1G050350.7 , HORVU3Hr1G050350.1 , HORVU3Hr1G050350.3 , HORVU0Hr1G020810.3 , HORVU0Hr1G020810.2 , HORVU0Hr1G020810.1 , HORVU5Hr1G073440.9 , HORVU5Hr1G073440.8 , HORVU5Hr1G073440.5 , HORVU5Hr1G073440.4 , HORVU5Hr1G073440.7 , HORVU5Hr1G073440.6 , HORVU5Hr1G073440.1 , HORVU5Hr1G073440.3 , HORVU5Hr1G073440.2
Wheat TraesCS7D02G245200 , TraesCS7D02G245200 , TraesCS5D02G273900 , TraesCS5D02G273900 , TraesCS5B02G265600 , TraesCS5B02G265600 , TraesCS7B02G144900 , TraesCS7B02G144900 , TraesCS7A02G246500 , TraesCS5A02G265900 , TraesCS5A02G265900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
2 Sobic.002G179150 - -
3 Sobic.004G170900 expressed protein -
4 Sobic.001G470100 OsFBX77 - F-box domain containing protein, expressed -
5 Sobic.005G142500 plant protein of unknown function domain containing protein, expressed -
6 Sobic.004G285900 HMG1/2, putative, expressed -
7 Sobic.001G030400 protein kinase family protein, putative, expressed -
8 Sobic.010G159100 DUF538 domain containing protein, putative, expressed -
9 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
10 Sobic.001G389300 OsFBX82 - F-box domain containing protein, expressed -
11 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
12 Sobic.004G217450 - -
13 Sobic.002G254300 expressed protein -
14 Sobic.002G227900 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.001G439100 thaumatin-like protein 1 precursor, putative, expressed -
16 Sobic.004G170800 serine-aspartate repeat-containing protein I precursor, putative, expressed -
17 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
18 Sobic.002G226500 "SG1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659856)@expressed protein -
19 Sobic.005G129700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
20 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote


Gene co-expression network
sample Sobic002G247800 Sobic002G247800 Sobic007G225400 Sobic007G225400 Sobic002G247800--Sobic007G225400 Sobic002G179150 Sobic002G179150 Sobic002G247800--Sobic002G179150 Sobic004G170900 Sobic004G170900 Sobic002G247800--Sobic004G170900 Sobic001G470100 Sobic001G470100 Sobic002G247800--Sobic001G470100 Sobic005G142500 Sobic005G142500 Sobic002G247800--Sobic005G142500 Sobic004G285900 Sobic004G285900 Sobic002G247800--Sobic004G285900 Sobic001G030400 Sobic001G030400 Sobic002G247800--Sobic001G030400 Sobic010G159100 Sobic010G159100 Sobic002G247800--Sobic010G159100 Sobic003G011100 Sobic003G011100 Sobic002G247800--Sobic003G011100 Sobic007G225400--Sobic004G170900 Sobic005G098400 Sobic005G098400 Sobic007G225400--Sobic005G098400 Sobic010G216600 Sobic010G216600 Sobic007G225400--Sobic010G216600 Sobic005G047100 Sobic005G047100 Sobic007G225400--Sobic005G047100 Sobic002G226500 Sobic002G226500 Sobic007G225400--Sobic002G226500 Sobic005G121700 Sobic005G121700 Sobic007G225400--Sobic005G121700 Sobic002G016400 Sobic002G016400 Sobic007G225400--Sobic002G016400 Sobic001G305300 Sobic001G305300 Sobic007G225400--Sobic001G305300 Sobic001G264400 Sobic001G264400 Sobic007G225400--Sobic001G264400 Sobic002G179150--Sobic002G247800 Sobic007G214700 Sobic007G214700 Sobic002G179150--Sobic007G214700 Sobic001G107200 Sobic001G107200 Sobic002G179150--Sobic001G107200 Sobic001G389300 Sobic001G389300 Sobic002G179150--Sobic001G389300 Sobic002G179150--Sobic010G216600 Sobic002G179150--Sobic001G030400 Sobic001G528600 Sobic001G528600 Sobic002G179150--Sobic001G528600 Sobic002G353200 Sobic002G353200 Sobic002G179150--Sobic002G353200 Sobic010G111200 Sobic010G111200 Sobic002G179150--Sobic010G111200 Sobic004G170900--Sobic007G225400 Sobic004G170900--Sobic010G216600 Sobic004G170900--Sobic005G047100 Sobic006G054600 Sobic006G054600 Sobic004G170900--Sobic006G054600 Sobic009G242501 Sobic009G242501 Sobic004G170900--Sobic009G242501 Sobic002G224200 Sobic002G224200 Sobic004G170900--Sobic002G224200 Sobic002G280300 Sobic002G280300 Sobic004G170900--Sobic002G280300 Sobic004G156900 Sobic004G156900 Sobic004G170900--Sobic004G156900 Sobic009G021700 Sobic009G021700 Sobic004G170900--Sobic009G021700 Sobic002G251100 Sobic002G251100 Sobic001G470100--Sobic002G251100 Sobic001G470100--Sobic005G047100 Sobic001G038300 Sobic001G038300 Sobic001G470100--Sobic001G038300 Sobic001G156500 Sobic001G156500 Sobic001G470100--Sobic001G156500 Sobic001G470100--Sobic002G247800 Sobic007G150800 Sobic007G150800 Sobic001G470100--Sobic007G150800 Sobic001G470100--Sobic004G285900 Sobic001G261549 Sobic001G261549 Sobic001G470100--Sobic001G261549 Sobic001G470100--Sobic001G107200 Sobic004G170800 Sobic004G170800 Sobic005G142500--Sobic004G170800 Sobic004G050700 Sobic004G050700 Sobic005G142500--Sobic004G050700 Sobic001G264300 Sobic001G264300 Sobic005G142500--Sobic001G264300 Sobic005G142500--Sobic001G264400 Sobic003G427700 Sobic003G427700 Sobic005G142500--Sobic003G427700 Sobic005G051600 Sobic005G051600 Sobic005G142500--Sobic005G051600 Sobic005G142500--Sobic002G247800 Sobic009G221800 Sobic009G221800 Sobic005G142500--Sobic009G221800 Sobic009G130300 Sobic009G130300 Sobic005G142500--Sobic009G130300 Sobic001G078600 Sobic001G078600 Sobic004G285900--Sobic001G078600 Sobic004G285900--Sobic001G261549 Sobic004G279601 Sobic004G279601 Sobic004G285900--Sobic004G279601 Sobic004G285900--Sobic007G214700 Sobic006G102900 Sobic006G102900 Sobic004G285900--Sobic006G102900 Sobic002G162300 Sobic002G162300 Sobic004G285900--Sobic002G162300 Sobic007G154500 Sobic007G154500 Sobic004G285900--Sobic007G154500 Sobic009G189200 Sobic009G189200 Sobic004G285900--Sobic009G189200 Sobic001G205000 Sobic001G205000 Sobic004G285900--Sobic001G205000 Sobic006G133700 Sobic006G133700 Sobic001G030400--Sobic006G133700 Sobic001G468500 Sobic001G468500 Sobic001G030400--Sobic001G468500 Sobic003G084300 Sobic003G084300 Sobic001G030400--Sobic003G084300 Sobic001G030400--Sobic002G247800 Sobic009G165500 Sobic009G165500 Sobic001G030400--Sobic009G165500 Sobic010G222100 Sobic010G222100 Sobic001G030400--Sobic010G222100 Sobic007G009000 Sobic007G009000 Sobic001G030400--Sobic007G009000 Sobic004G331200 Sobic004G331200 Sobic001G030400--Sobic004G331200 Sobic001G030400--Sobic002G353200 Sobic002G241500 Sobic002G241500 Sobic010G159100--Sobic002G241500 Sobic010G001800 Sobic010G001800 Sobic010G159100--Sobic010G001800 Sobic010G159100--Sobic002G247800 Sobic010G159100--Sobic004G285900 Sobic010G159100--Sobic001G389300 Sobic001G108400 Sobic001G108400 Sobic010G159100--Sobic001G108400 Sobic010G159100--Sobic007G225400 Sobic010G159100--Sobic007G214700 Sobic010G159100--Sobic002G179150 Sobic003G011100--Sobic007G150800 Sobic006G216600 Sobic006G216600 Sobic003G011100--Sobic006G216600 Sobic001G475500 Sobic001G475500 Sobic003G011100--Sobic001G475500 Sobic006G201500 Sobic006G201500 Sobic003G011100--Sobic006G201500 Sobic003G396600 Sobic003G396600 Sobic003G011100--Sobic003G396600 Sobic009G144300 Sobic009G144300 Sobic003G011100--Sobic009G144300 Sobic006G115000 Sobic006G115000 Sobic003G011100--Sobic006G115000 Sobic003G387900 Sobic003G387900 Sobic003G011100--Sobic003G387900 Sobic009G233400 Sobic009G233400 Sobic003G011100--Sobic009G233400
Octagon: transcription factors


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