Gene annotation
Transcriptome id Sobic.002G226500.1
Synonym Sb02g026690
Functional annotation "SG1(Ortholog in rice:Nakagawa et al., 2012)" (PubMedID : 31659856)
expressed protein
UniProt C5X2C3
Pfam -
Panther DB PTHR31722 PTHR31722:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G34419 : -
RAP-DB (Rice) LOC_Os09g28520.1 : expressed protein
MaizeGDB (Corn) Zm00025a005427 , Zm00025a014073 , Zm00025a047258 , Zm00025a033104
Brachypodium PNT64722
Barley HORVU6Hr1G078700.4 , HORVU6Hr1G078700.5 , HORVU5Hr1G068550.4 , HORVU6Hr1G078700.1 , HORVU6Hr1G078700.3 , HORVU5Hr1G068550.1 , HORVU5Hr1G068550.3 , HORVU6Hr1G078700.2
Wheat TraesCS6B02G352000 , TraesCS6B02G352000 , TraesCS5A02G239200 , TraesCS6D02G301000 , TraesCS6D02G301000 , TraesCS6A02G321300 , TraesCS5B02G237800 , TraesCS5D02G246300 , TraesCS6A02G321300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G030200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.008G113900 AGAP002737-PA, putative, expressed -
3 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
4 Sobic.010G022500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
5 Sobic.002G278200 thaumatin, putative, expressed -
6 Sobic.006G149300 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
7 Sobic.006G119000 X8 domain containing protein, expressed -
8 Sobic.003G052900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@-(PubMedID : 23108465)@LOB family(PubMedID : 16399802)@DUF260 domain containing protein, putative, expressed -
9 Sobic.004G030300 expressed protein -
10 Sobic.007G050500 MYB family transcription factor, putative, expressed -
11 Sobic.007G208100 heavy metal-associated domain containing protein, expressed -
12 Sobic.003G247600 serine/threonine-protein kinase, putative, expressed -
13 Sobic.002G016400 monocopper oxidase, putative, expressed -
14 Sobic.003G307400 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
15 Sobic.008G077300 expressed protein -
16 Sobic.005G231300 thaumatin, putative, expressed -
17 Sobic.003G121000 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.008G135300 thaumatin family domain containing protein, expressed -
19 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
20 Sobic.004G170900 expressed protein -


Gene co-expression network
sample Sobic002G226500 Sobic002G226500 Sobic006G030200 Sobic006G030200 Sobic002G226500--Sobic006G030200 Sobic008G113900 Sobic008G113900 Sobic002G226500--Sobic008G113900 Sobic007G225400 Sobic007G225400 Sobic002G226500--Sobic007G225400 Sobic010G022500 Sobic010G022500 Sobic002G226500--Sobic010G022500 Sobic002G278200 Sobic002G278200 Sobic002G226500--Sobic002G278200 Sobic006G149300 Sobic006G149300 Sobic002G226500--Sobic006G149300 Sobic006G119000 Sobic006G119000 Sobic002G226500--Sobic006G119000 Sobic003G052900 Sobic003G052900 Sobic002G226500--Sobic003G052900 Sobic004G030300 Sobic004G030300 Sobic002G226500--Sobic004G030300 Sobic006G030200--Sobic006G119000 Sobic006G030200--Sobic002G226500 Sobic005G231300 Sobic005G231300 Sobic006G030200--Sobic005G231300 Sobic006G030200--Sobic008G113900 Sobic001G514300 Sobic001G514300 Sobic006G030200--Sobic001G514300 Sobic008G077300 Sobic008G077300 Sobic006G030200--Sobic008G077300 Sobic001G264400 Sobic001G264400 Sobic006G030200--Sobic001G264400 Sobic009G210400 Sobic009G210400 Sobic006G030200--Sobic009G210400 Sobic002G016400 Sobic002G016400 Sobic006G030200--Sobic002G016400 Sobic008G113900--Sobic006G030200 Sobic008G113900--Sobic005G231300 Sobic008G113900--Sobic001G514300 Sobic008G113900--Sobic002G226500 Sobic008G114000 Sobic008G114000 Sobic008G113900--Sobic008G114000 Sobic008G135300 Sobic008G135300 Sobic008G113900--Sobic008G135300 Sobic007G208100 Sobic007G208100 Sobic008G113900--Sobic007G208100 Sobic003G083600 Sobic003G083600 Sobic008G113900--Sobic003G083600 Sobic003G183300 Sobic003G183300 Sobic008G113900--Sobic003G183300 Sobic004G170900 Sobic004G170900 Sobic007G225400--Sobic004G170900 Sobic005G098400 Sobic005G098400 Sobic007G225400--Sobic005G098400 Sobic010G216600 Sobic010G216600 Sobic007G225400--Sobic010G216600 Sobic005G047100 Sobic005G047100 Sobic007G225400--Sobic005G047100 Sobic007G225400--Sobic002G226500 Sobic005G121700 Sobic005G121700 Sobic007G225400--Sobic005G121700 Sobic007G225400--Sobic002G016400 Sobic001G305300 Sobic001G305300 Sobic007G225400--Sobic001G305300 Sobic007G225400--Sobic001G264400 Sobic010G022500--Sobic002G226500 Sobic009G221800 Sobic009G221800 Sobic010G022500--Sobic009G221800 Sobic010G022500--Sobic001G264400 Sobic010G022500--Sobic008G113900 Sobic003G121000 Sobic003G121000 Sobic010G022500--Sobic003G121000 Sobic001G264300 Sobic001G264300 Sobic010G022500--Sobic001G264300 Sobic003G321400 Sobic003G321400 Sobic010G022500--Sobic003G321400 Sobic003G115200 Sobic003G115200 Sobic010G022500--Sobic003G115200 Sobic009G130300 Sobic009G130300 Sobic010G022500--Sobic009G130300 Sobic006G105600 Sobic006G105600 Sobic002G278200--Sobic006G105600 Sobic007G050500 Sobic007G050500 Sobic002G278200--Sobic007G050500 Sobic002G142200 Sobic002G142200 Sobic002G278200--Sobic002G142200 Sobic002G278200--Sobic002G016400 Sobic004G287700 Sobic004G287700 Sobic002G278200--Sobic004G287700 Sobic009G208900 Sobic009G208900 Sobic002G278200--Sobic009G208900 Sobic002G278200--Sobic002G226500 Sobic004G233700 Sobic004G233700 Sobic002G278200--Sobic004G233700 Sobic005G091000 Sobic005G091000 Sobic002G278200--Sobic005G091000 Sobic006G149300--Sobic002G016400 Sobic006G149300--Sobic007G208100 Sobic010G104400 Sobic010G104400 Sobic006G149300--Sobic010G104400 Sobic006G149300--Sobic005G231300 Sobic006G149300--Sobic005G098400 Sobic006G149300--Sobic002G226500 Sobic006G149300--Sobic002G278200 Sobic007G120301 Sobic007G120301 Sobic006G149300--Sobic007G120301 Sobic007G018100 Sobic007G018100 Sobic006G149300--Sobic007G018100 Sobic006G119000--Sobic006G030200 Sobic001G295000 Sobic001G295000 Sobic006G119000--Sobic001G295000 Sobic003G307400 Sobic003G307400 Sobic006G119000--Sobic003G307400 Sobic006G119000--Sobic003G121000 Sobic001G314000 Sobic001G314000 Sobic006G119000--Sobic001G314000 Sobic003G236600 Sobic003G236600 Sobic006G119000--Sobic003G236600 Sobic001G245800 Sobic001G245800 Sobic006G119000--Sobic001G245800 Sobic006G119000--Sobic001G514300 Sobic006G119000--Sobic008G135300 Sobic003G052900--Sobic004G030300 Sobic003G052900--Sobic001G245800 Sobic001G455100 Sobic001G455100 Sobic003G052900--Sobic001G455100 Sobic003G052900--Sobic008G135300 Sobic003G052900--Sobic002G226500 Sobic008G099100 Sobic008G099100 Sobic003G052900--Sobic008G099100 Sobic001G295800 Sobic001G295800 Sobic003G052900--Sobic001G295800 Sobic003G052900--Sobic005G231300 Sobic003G247600 Sobic003G247600 Sobic003G052900--Sobic003G247600 Sobic004G030300--Sobic003G052900 Sobic004G030300--Sobic002G226500 Sobic004G030300--Sobic001G245800 Sobic004G030300--Sobic006G030200 Sobic004G030300--Sobic007G018100 Sobic004G030300--Sobic006G119000 Sobic004G030300--Sobic003G247600 Sobic004G030300--Sobic003G307400 Sobic001G434300 Sobic001G434300 Sobic004G030300--Sobic001G434300
Octagon: transcription factors


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