Gene annotation
Transcriptome id Sobic.004G030300.1
Synonym
Functional annotation expressed protein
UniProt C5XTV1
Pfam -
Panther DB PTHR33142 PTHR33142:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40460 : -
RAP-DB (Rice) LOC_Os02g03830.1 : expressed protein
MaizeGDB (Corn) Zm00025a018856
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G052900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@-(PubMedID : 23108465)@LOB family(PubMedID : 16399802)@DUF260 domain containing protein, putative, expressed -
2 Sobic.002G226500 "SG1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659856)@expressed protein -
3 Sobic.001G245800 expressed protein -
4 Sobic.006G030200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.007G018100 no apical meristem protein, putative, expressed -
6 Sobic.006G119000 X8 domain containing protein, expressed -
7 Sobic.003G247600 serine/threonine-protein kinase, putative, expressed -
8 Sobic.003G307400 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
9 Sobic.001G434300 expressed protein -
10 Sobic.010G022500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
11 Sobic.005G004700 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.009G199001 - -
13 Sobic.001G295800 expressed protein -
14 Sobic.008G113900 AGAP002737-PA, putative, expressed -
15 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
16 Sobic.008G135300 thaumatin family domain containing protein, expressed -
17 Sobic.010G138300 DUF617 domain containing protein, expressed -
18 Sobic.006G149300 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
19 Sobic.008G110200 OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed K09377: cysteine and glycine-rich protein
20 Sobic.007G154200 aspartic proteinase nepenthesin-1 precursor, putative, expressed -


Gene co-expression network
sample Sobic004G030300 Sobic004G030300 Sobic003G052900 Sobic003G052900 Sobic004G030300--Sobic003G052900 Sobic002G226500 Sobic002G226500 Sobic004G030300--Sobic002G226500 Sobic001G245800 Sobic001G245800 Sobic004G030300--Sobic001G245800 Sobic006G030200 Sobic006G030200 Sobic004G030300--Sobic006G030200 Sobic007G018100 Sobic007G018100 Sobic004G030300--Sobic007G018100 Sobic006G119000 Sobic006G119000 Sobic004G030300--Sobic006G119000 Sobic003G247600 Sobic003G247600 Sobic004G030300--Sobic003G247600 Sobic003G307400 Sobic003G307400 Sobic004G030300--Sobic003G307400 Sobic001G434300 Sobic001G434300 Sobic004G030300--Sobic001G434300 Sobic003G052900--Sobic004G030300 Sobic003G052900--Sobic001G245800 Sobic001G455100 Sobic001G455100 Sobic003G052900--Sobic001G455100 Sobic008G135300 Sobic008G135300 Sobic003G052900--Sobic008G135300 Sobic003G052900--Sobic002G226500 Sobic008G099100 Sobic008G099100 Sobic003G052900--Sobic008G099100 Sobic001G295800 Sobic001G295800 Sobic003G052900--Sobic001G295800 Sobic005G231300 Sobic005G231300 Sobic003G052900--Sobic005G231300 Sobic003G052900--Sobic003G247600 Sobic002G226500--Sobic006G030200 Sobic008G113900 Sobic008G113900 Sobic002G226500--Sobic008G113900 Sobic007G225400 Sobic007G225400 Sobic002G226500--Sobic007G225400 Sobic010G022500 Sobic010G022500 Sobic002G226500--Sobic010G022500 Sobic002G278200 Sobic002G278200 Sobic002G226500--Sobic002G278200 Sobic006G149300 Sobic006G149300 Sobic002G226500--Sobic006G149300 Sobic002G226500--Sobic006G119000 Sobic002G226500--Sobic003G052900 Sobic002G226500--Sobic004G030300 Sobic010G138300 Sobic010G138300 Sobic001G245800--Sobic010G138300 Sobic009G074500 Sobic009G074500 Sobic001G245800--Sobic009G074500 Sobic001G261460 Sobic001G261460 Sobic001G245800--Sobic001G261460 Sobic010G047600 Sobic010G047600 Sobic001G245800--Sobic010G047600 Sobic001G514200 Sobic001G514200 Sobic001G245800--Sobic001G514200 Sobic009G199001 Sobic009G199001 Sobic001G245800--Sobic009G199001 Sobic009G221800 Sobic009G221800 Sobic001G245800--Sobic009G221800 Sobic008G102800 Sobic008G102800 Sobic001G245800--Sobic008G102800 Sobic004G170800 Sobic004G170800 Sobic001G245800--Sobic004G170800 Sobic006G030200--Sobic006G119000 Sobic006G030200--Sobic002G226500 Sobic006G030200--Sobic005G231300 Sobic006G030200--Sobic008G113900 Sobic001G514300 Sobic001G514300 Sobic006G030200--Sobic001G514300 Sobic008G077300 Sobic008G077300 Sobic006G030200--Sobic008G077300 Sobic001G264400 Sobic001G264400 Sobic006G030200--Sobic001G264400 Sobic009G210400 Sobic009G210400 Sobic006G030200--Sobic009G210400 Sobic002G016400 Sobic002G016400 Sobic006G030200--Sobic002G016400 Sobic007G018100--Sobic006G149300 Sobic007G018100--Sobic003G052900 Sobic007G018100--Sobic003G247600 Sobic007G018100--Sobic008G113900 Sobic007G018100--Sobic004G030300 Sobic007G208100 Sobic007G208100 Sobic007G018100--Sobic007G208100 Sobic007G018100--Sobic005G231300 Sobic007G018100--Sobic006G030200 Sobic010G131400 Sobic010G131400 Sobic007G018100--Sobic010G131400 Sobic006G119000--Sobic006G030200 Sobic001G295000 Sobic001G295000 Sobic006G119000--Sobic001G295000 Sobic006G119000--Sobic003G307400 Sobic003G121000 Sobic003G121000 Sobic006G119000--Sobic003G121000 Sobic001G314000 Sobic001G314000 Sobic006G119000--Sobic001G314000 Sobic003G236600 Sobic003G236600 Sobic006G119000--Sobic003G236600 Sobic006G119000--Sobic001G245800 Sobic006G119000--Sobic001G514300 Sobic006G119000--Sobic008G135300 Sobic005G047100 Sobic005G047100 Sobic003G247600--Sobic005G047100 Sobic003G420100 Sobic003G420100 Sobic003G247600--Sobic003G420100 Sobic004G066900 Sobic004G066900 Sobic003G247600--Sobic004G066900 Sobic003G247600--Sobic007G208100 Sobic008G141200 Sobic008G141200 Sobic003G247600--Sobic008G141200 Sobic003G135400 Sobic003G135400 Sobic003G247600--Sobic003G135400 Sobic003G247600--Sobic003G052900 Sobic003G345700 Sobic003G345700 Sobic003G247600--Sobic003G345700 Sobic003G247600--Sobic006G119000 Sobic003G307400--Sobic010G138300 Sobic003G307400--Sobic001G514200 Sobic003G307400--Sobic003G121000 Sobic003G307400--Sobic006G119000 Sobic003G307400--Sobic008G135300 Sobic003G034600 Sobic003G034600 Sobic003G307400--Sobic003G034600 Sobic001G522700 Sobic001G522700 Sobic003G307400--Sobic001G522700 Sobic003G307400--Sobic001G295800 Sobic003G307400--Sobic008G102800 Sobic002G154600 Sobic002G154600 Sobic001G434300--Sobic002G154600 Sobic007G218800 Sobic007G218800 Sobic001G434300--Sobic007G218800 Sobic003G219800 Sobic003G219800 Sobic001G434300--Sobic003G219800 Sobic001G038300 Sobic001G038300 Sobic001G434300--Sobic001G038300 Sobic003G316000 Sobic003G316000 Sobic001G434300--Sobic003G316000 Sobic001G310300 Sobic001G310300 Sobic001G434300--Sobic001G310300 Sobic005G061200 Sobic005G061200 Sobic001G434300--Sobic005G061200 Sobic009G181800 Sobic009G181800 Sobic001G434300--Sobic009G181800 Sobic001G418100 Sobic001G418100 Sobic001G434300--Sobic001G418100
Octagon: transcription factors


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