Gene annotation
Transcriptome id Sobic.007G018100.1
Synonym Sb07g001550, NST1, ANAC043, EMB2301
Functional annotation no apical meristem protein, putative, expressed
UniProt A0A1B6PF15
Pfam PF02365
Panther DB PTHR31989 PTHR31989:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G46770 : NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
RAP-DB (Rice) LOC_Os08g02300.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a042359 , Zm00025a049186 , Zm00025a030255 , Zm00025a040616 , Zm00025a032018 , Zm00025a032141 , Zm00025a041401 , Zm00025a020964 , Zm00025a050329 , Zm00025a050155 , Zm00025a010429 , Zm00025a040250 , Zm00025a050926 , Zm00025a018537
Brachypodium PNT74415 , KQJ94869 , KQK00527 , KQK14591 , KQJ94263 , KQJ94262 , PNT61568 , KQK19730 , KQK10957 , KQK20318 , KQK06182 , KQK10307 , KQK15684 , KQK15686 , KQK15688 , KQK14132 , PNT71229 , KQK18101 , KQK18102 , PNT76724 , KQK16671 , KQK06213 , KQK20059 , KQJ83800 , KQJ82828 , PNT76596 , KQJ83799 , KQJ83798
Barley HORVU2Hr1G017470.1 , HORVU2Hr1G017470.3 , HORVU2Hr1G017470.2 , HORVU2Hr1G017470.4 , HORVU2Hr1G017470.7 , HORVU2Hr1G017470.9 , HORVU2Hr1G017470.8 , HORVU7Hr1G000140.8 , HORVU7Hr1G000140.9 , HORVU7Hr1G000140.4 , HORVU7Hr1G000140.5 , HORVU7Hr1G000140.6 , HORVU7Hr1G000140.7 , HORVU7Hr1G075550.3 , HORVU7Hr1G075550.2 , HORVU7Hr1G075550.1 , HORVU7Hr1G075550.7 , HORVU7Hr1G075550.6 , HORVU7Hr1G075550.5 , HORVU7Hr1G075550.4 , HORVU3Hr1G090440.4 , HORVU3Hr1G090440.5 , HORVU3Hr1G090440.6 , HORVU3Hr1G090440.7 , HORVU3Hr1G090440.1 , HORVU3Hr1G090440.2 , HORVU3Hr1G090440.8 , HORVU3Hr1G090440.9 , HORVU3Hr1G094170.1 , HORVU6Hr1G060800.2 , HORVU6Hr1G060800.3 , HORVU6Hr1G060800.1 , HORVU6Hr1G060800.6 , HORVU6Hr1G060800.7 , HORVU6Hr1G060800.4 , HORVU6Hr1G060800.5 , HORVU7Hr1G012760.10 , HORVU1Hr1G064300.2 , HORVU1Hr1G064300.1 , HORVU1Hr1G064300.4 , HORVU1Hr1G064300.5 , HORVU7Hr1G012730.2 , HORVU7Hr1G012730.3 , HORVU7Hr1G012730.4 , HORVU7Hr1G012730.7 , HORVU7Hr1G012730.8 , HORVU7Hr1G012730.9 , HORVU7Hr1G079500.1 , HORVU7Hr1G012740.1 , HORVU7Hr1G079500.2 , HORVU7Hr1G079500.3 , HORVU4Hr1G083050.2 , HORVU4Hr1G083050.3 , HORVU4Hr1G083050.4 , HORVU4Hr1G083050.5 , HORVU4Hr1G083050.6 , HORVU4Hr1G083050.7 , HORVU4Hr1G083050.8 , HORVU4Hr1G083050.9 , HORVU4Hr1G083050.12 , HORVU4Hr1G083050.10 , HORVU4Hr1G083050.11 , HORVU4Hr1G083050.15 , HORVU7Hr1G012760.3 , HORVU7Hr1G012760.2 , HORVU7Hr1G012760.1 , HORVU7Hr1G012760.7 , HORVU7Hr1G012760.6 , HORVU7Hr1G012760.5 , HORVU7Hr1G012760.4 , HORVU7Hr1G012760.9 , HORVU7Hr1G012760.8 , HORVU0Hr1G028970.1 , HORVU7Hr1G012780.7 , HORVU7Hr1G000140.12 , HORVU7Hr1G000140.13 , HORVU7Hr1G000140.10 , HORVU7Hr1G000140.11 , HORVU0Hr1G026330.5 , HORVU0Hr1G026330.1 , HORVU0Hr1G026330.2 , HORVU2Hr1G017470.15 , HORVU2Hr1G017470.14 , HORVU2Hr1G017470.11 , HORVU2Hr1G017470.10 , HORVU2Hr1G017470.13 , HORVU2Hr1G017470.12 , HORVU7Hr1G079500.4 , HORVU4Hr1G012030.1 , HORVU4Hr1G012030.2 , HORVU7Hr1G012780.9 , HORVU7Hr1G012780.8 , HORVU7Hr1G012780.5 , HORVU7Hr1G012780.4 , HORVU7Hr1G012780.6 , HORVU7Hr1G012780.1 , HORVU7Hr1G012780.3 , HORVU7Hr1G012780.2 , HORVU6Hr1G015950.1 , HORVU3Hr1G090440.10 , HORVU6Hr1G060800.8 , HORVU2Hr1G017460.10 , HORVU4Hr1G083050.13 , HORVU4Hr1G083050.14 , HORVU2Hr1G017460.8 , HORVU2Hr1G017460.9 , HORVU2Hr1G017460.2 , HORVU2Hr1G017460.6 , HORVU2Hr1G017460.7 , HORVU2Hr1G017460.4 , HORVU2Hr1G017460.5
Wheat TraesCS4A02G421300 , TraesCS7D02G062100 , TraesCS1D02G263800 , TraesCS7D02G063300 , TraesCS4A02G420200 , TraesCS1A02G261800 , TraesCS4A02G421200 , TraesCS6A02G237900 , TraesCS7A02G068300 , TraesCS3B02G436900 , TraesCS7A02G317100 , TraesCS7A02G317100 , TraesCS4A02G419900 , TraesCS7D02G008500 , TraesCS2A02G101900 , TraesCS2B02G119100 , TraesCS5A02G491700 , TraesCS7D02G062600 , TraesCS2D02G101400 , TraesCS4B02G320300 , TraesCS7D02G314000 , TraesCS7D02G314000 , TraesCS6D02G220600 , TraesCS4A02G421100 , TraesCS4A02G420900 , TraesCS2A02G102000 , TraesCS3A02G403300 , TraesCS4A02G242700 , TraesCS1D02G261800 , TraesCS4D02G316800 , TraesCS1B02G272600 , TraesCS7B02G233300 , TraesCS7A02G008800 , TraesCS4A02G420000 , TraesCS4D02G071200 , TraesCS7D02G329200 , TraesCS2A02G566300 , TraesCS7A02G068200 , TraesCS7A02G349500 , TraesCS7D02G062400 , TraesCS3D02G398200 , TraesCS1A02G263700 , TraesCS7D02G062300 , TraesCS4A02G421000 , TraesCS4A02G420100 , TraesCS6B02G286200 , TraesCS6B02G286200 , TraesCS7A02G068000 , TraesCS4A02G486200
Populus -


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cDNA sequences
Sobic.007G018100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G149300 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
2 Sobic.003G052900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@-(PubMedID : 23108465)@LOB family(PubMedID : 16399802)@DUF260 domain containing protein, putative, expressed -
3 Sobic.003G247600 serine/threonine-protein kinase, putative, expressed -
4 Sobic.008G113900 AGAP002737-PA, putative, expressed -
5 Sobic.004G030300 expressed protein -
6 Sobic.007G208100 heavy metal-associated domain containing protein, expressed -
7 Sobic.005G231300 thaumatin, putative, expressed -
8 Sobic.006G030200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
10 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
11 Sobic.002G226500 "SG1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659856)@expressed protein -
12 Sobic.008G141200 DUF1336 domain containing protein, expressed -
13 Sobic.001G406700 expressed protein -
14 Sobic.002G016400 monocopper oxidase, putative, expressed -
15 Sobic.008G077300 expressed protein -
16 Sobic.008G110200 OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed K09377: cysteine and glycine-rich protein
17 Sobic.010G179900 transferase family protein, putative, expressed -
18 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
19 Sobic.008G137000 RALFL42 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
20 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor


Gene co-expression network
sample Sobic007G018100 Sobic007G018100 Sobic006G149300 Sobic006G149300 Sobic007G018100--Sobic006G149300 Sobic003G052900 Sobic003G052900 Sobic007G018100--Sobic003G052900 Sobic003G247600 Sobic003G247600 Sobic007G018100--Sobic003G247600 Sobic008G113900 Sobic008G113900 Sobic007G018100--Sobic008G113900 Sobic004G030300 Sobic004G030300 Sobic007G018100--Sobic004G030300 Sobic007G208100 Sobic007G208100 Sobic007G018100--Sobic007G208100 Sobic005G231300 Sobic005G231300 Sobic007G018100--Sobic005G231300 Sobic006G030200 Sobic006G030200 Sobic007G018100--Sobic006G030200 Sobic010G131400 Sobic010G131400 Sobic007G018100--Sobic010G131400 Sobic002G016400 Sobic002G016400 Sobic006G149300--Sobic002G016400 Sobic006G149300--Sobic007G208100 Sobic010G104400 Sobic010G104400 Sobic006G149300--Sobic010G104400 Sobic006G149300--Sobic005G231300 Sobic005G098400 Sobic005G098400 Sobic006G149300--Sobic005G098400 Sobic002G226500 Sobic002G226500 Sobic006G149300--Sobic002G226500 Sobic002G278200 Sobic002G278200 Sobic006G149300--Sobic002G278200 Sobic007G120301 Sobic007G120301 Sobic006G149300--Sobic007G120301 Sobic006G149300--Sobic007G018100 Sobic003G052900--Sobic004G030300 Sobic001G245800 Sobic001G245800 Sobic003G052900--Sobic001G245800 Sobic001G455100 Sobic001G455100 Sobic003G052900--Sobic001G455100 Sobic008G135300 Sobic008G135300 Sobic003G052900--Sobic008G135300 Sobic003G052900--Sobic002G226500 Sobic008G099100 Sobic008G099100 Sobic003G052900--Sobic008G099100 Sobic001G295800 Sobic001G295800 Sobic003G052900--Sobic001G295800 Sobic003G052900--Sobic005G231300 Sobic003G052900--Sobic003G247600 Sobic005G047100 Sobic005G047100 Sobic003G247600--Sobic005G047100 Sobic003G420100 Sobic003G420100 Sobic003G247600--Sobic003G420100 Sobic004G066900 Sobic004G066900 Sobic003G247600--Sobic004G066900 Sobic003G247600--Sobic007G208100 Sobic008G141200 Sobic008G141200 Sobic003G247600--Sobic008G141200 Sobic003G135400 Sobic003G135400 Sobic003G247600--Sobic003G135400 Sobic003G247600--Sobic003G052900 Sobic003G345700 Sobic003G345700 Sobic003G247600--Sobic003G345700 Sobic006G119000 Sobic006G119000 Sobic003G247600--Sobic006G119000 Sobic008G113900--Sobic006G030200 Sobic008G113900--Sobic005G231300 Sobic001G514300 Sobic001G514300 Sobic008G113900--Sobic001G514300 Sobic008G113900--Sobic002G226500 Sobic008G114000 Sobic008G114000 Sobic008G113900--Sobic008G114000 Sobic008G113900--Sobic008G135300 Sobic008G113900--Sobic007G208100 Sobic003G083600 Sobic003G083600 Sobic008G113900--Sobic003G083600 Sobic003G183300 Sobic003G183300 Sobic008G113900--Sobic003G183300 Sobic004G030300--Sobic003G052900 Sobic004G030300--Sobic002G226500 Sobic004G030300--Sobic001G245800 Sobic004G030300--Sobic006G030200 Sobic004G030300--Sobic007G018100 Sobic004G030300--Sobic006G119000 Sobic004G030300--Sobic003G247600 Sobic003G307400 Sobic003G307400 Sobic004G030300--Sobic003G307400 Sobic001G434300 Sobic001G434300 Sobic004G030300--Sobic001G434300 Sobic007G208100--Sobic005G231300 Sobic007G208100--Sobic002G016400 Sobic003G296500 Sobic003G296500 Sobic007G208100--Sobic003G296500 Sobic007G208100--Sobic006G149300 Sobic002G034301 Sobic002G034301 Sobic007G208100--Sobic002G034301 Sobic007G208100--Sobic003G420100 Sobic007G208100--Sobic010G104400 Sobic007G208100--Sobic003G247600 Sobic007G208100--Sobic001G514300 Sobic005G231300--Sobic001G514300 Sobic005G231300--Sobic003G083600 Sobic009G079900 Sobic009G079900 Sobic005G231300--Sobic009G079900 Sobic005G231300--Sobic008G099100 Sobic005G231300--Sobic007G208100 Sobic005G231300--Sobic006G030200 Sobic001G314000 Sobic001G314000 Sobic005G231300--Sobic001G314000 Sobic008G077300 Sobic008G077300 Sobic005G231300--Sobic008G077300 Sobic003G151900 Sobic003G151900 Sobic005G231300--Sobic003G151900 Sobic006G030200--Sobic006G119000 Sobic006G030200--Sobic002G226500 Sobic006G030200--Sobic005G231300 Sobic006G030200--Sobic008G113900 Sobic006G030200--Sobic001G514300 Sobic006G030200--Sobic008G077300 Sobic001G264400 Sobic001G264400 Sobic006G030200--Sobic001G264400 Sobic009G210400 Sobic009G210400 Sobic006G030200--Sobic009G210400 Sobic006G030200--Sobic002G016400 Sobic010G180100 Sobic010G180100 Sobic010G131400--Sobic010G180100 Sobic002G254900 Sobic002G254900 Sobic010G131400--Sobic002G254900 Sobic001G360700 Sobic001G360700 Sobic010G131400--Sobic001G360700 Sobic001G002800 Sobic001G002800 Sobic010G131400--Sobic001G002800 Sobic002G167600 Sobic002G167600 Sobic010G131400--Sobic002G167600 Sobic006G180300 Sobic006G180300 Sobic010G131400--Sobic006G180300 Sobic002G271300 Sobic002G271300 Sobic010G131400--Sobic002G271300 Sobic010G131400--Sobic008G141200 Sobic001G406700 Sobic001G406700 Sobic010G131400--Sobic001G406700
Octagon: transcription factors


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