Gene annotation
| Transcriptome id | Sobic.010G179900.1 |
|---|---|
| Synonym | Sb10g023150 |
| Functional annotation | transferase family protein, putative, expressed |
| UniProt | C5Z596 |
| Pfam | PF02458 |
| Panther DB | PTHR31147 PTHR31147:SF11 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups |
Orthologs (automatic annotation)
| TAIR | AT3G62160 : HXXXD-type acyl-transferase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os06g39390.1 : transferase family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a023099 , Zm00025a042264 |
| Brachypodium | KQK17830 |
| Barley | HORVU7Hr1G085400.4 , HORVU7Hr1G085390.6 , HORVU7Hr1G085390.4 , HORVU7Hr1G085390.5 , HORVU7Hr1G085390.2 , HORVU7Hr1G085390.3 , HORVU7Hr1G085390.1 , HORVU7Hr1G085100.2 , HORVU7Hr1G085100.1 |
| Wheat | TraesCS7D02G352300 , TraesCS7B02G257300 , TraesCS7A02G370600 |
| Populus | - |
JBrowse
| Sobic.010G179900 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G183300 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 2 | Sobic.004G047600 | plant-specific domain TIGR01627 family protein, expressed | - |
| 3 | Sobic.009G162300 | similar to Putative laccase-11(PubMedID : 29862293)@Laccase LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed | K05909: laccase |
| 4 | Sobic.001G360700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed | K13083: flavonoid 3',5'-hydroxylase |
| 5 | Sobic.001G169400 | Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed | - |
| 6 | Sobic.001G218400 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed | - |
| 7 | Sobic.003G353200 | similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Laccase 2 LAC2 (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed | K05909: laccase |
| 8 | Sobic.002G366200 | NAD dependent epimerase/dehydratase family protein, putative, expressed | - |
| 9 | Sobic.006G097900 | xyloglucan fucosyltransferase, putative, expressed | K13681: xyloglucan fucosyltransferase |
| 10 | Sobic.003G280000 | myb-like DNA-binding domain containing protein, putative, expressed | K09422: transcription factor MYB, plant |
| 11 | Sobic.009G095800 | DUF623 domain containing protein, expressed | - |
| 12 | Sobic.001G014700 | glucan endo-1,3-beta-glucosidase precursor, putative, expressed | - |
| 13 | Sobic.001G181600 | dehydrogenase/reductase, putative, expressed | - |
| 14 | Sobic.008G109300 | oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed | - |
| 15 | Sobic.002G080200 | receptor protein kinase, putative, expressed | - |
| 16 | Sobic.003G154500 | helix-loop-helix DNA-binding domain containing protein, expressed | - |
| 17 | Sobic.006G003100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed | - |
| 18 | Sobic.004G121600 | expansin precursor, putative, expressed | - |
| 19 | Sobic.002G146000 | "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed | K09753: cinnamoyl-CoA reductase |
| 20 | Sobic.008G113900 | AGAP002737-PA, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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