Gene annotation
Transcriptome id Sobic.008G141200.2,Sobic.008G141200.3,Sobic.008G141200.1,Sobic.008G141200.4
Synonym Sb08g019210
Functional annotation DUF1336 domain containing protein, expressed
UniProt C5YQE3
Pfam PF07059
Panther DB PTHR31558 PTHR31558:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G29180 : Protein of unknown function (DUF1336)
RAP-DB (Rice) LOC_Os12g38850.1,LOC_Os12g38850.2,LOC_Os12g38850.3 : DUF1336 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a004330
Brachypodium -
Barley -
Wheat TraesCS5B02G081600 , TraesCS5A02G075300 , TraesCS5D02G088800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
2 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
3 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
4 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
5 Sobic.003G247600 serine/threonine-protein kinase, putative, expressed -
6 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
7 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
8 Sobic.009G214100 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
9 Sobic.004G066900 protein kinase family protein, putative, expressed -
10 Sobic.001G144200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
11 Sobic.007G040301 - -
12 Sobic.010G180100 transferase family protein, putative, expressed -
13 Sobic.007G044400 MSP domain containing protein, expressed -
14 Sobic.010G144900 fiber protein Fb34, putative, expressed -
15 Sobic.009G026101 - -
16 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
17 Sobic.001G260701 -(PubMedID : 26976818) -
18 Sobic.006G102900 expressed protein -
19 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -
20 Sobic.008G110200 OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed K09377: cysteine and glycine-rich protein


Gene co-expression network
sample Sobic008G141200 Sobic008G141200 Sobic003G135400 Sobic003G135400 Sobic008G141200--Sobic003G135400 Sobic009G206500 Sobic009G206500 Sobic008G141200--Sobic009G206500 Sobic003G420100 Sobic003G420100 Sobic008G141200--Sobic003G420100 Sobic009G059500 Sobic009G059500 Sobic008G141200--Sobic009G059500 Sobic003G247600 Sobic003G247600 Sobic008G141200--Sobic003G247600 Sobic010G131400 Sobic010G131400 Sobic008G141200--Sobic010G131400 Sobic009G189200 Sobic009G189200 Sobic008G141200--Sobic009G189200 Sobic009G214100 Sobic009G214100 Sobic008G141200--Sobic009G214100 Sobic004G066900 Sobic004G066900 Sobic008G141200--Sobic004G066900 Sobic003G410600 Sobic003G410600 Sobic003G135400--Sobic003G410600 Sobic001G078600 Sobic001G078600 Sobic003G135400--Sobic001G078600 Sobic003G294500 Sobic003G294500 Sobic003G135400--Sobic003G294500 Sobic004G197400 Sobic004G197400 Sobic003G135400--Sobic004G197400 Sobic003G135400--Sobic008G141200 Sobic005G144600 Sobic005G144600 Sobic003G135400--Sobic005G144600 Sobic007G219400 Sobic007G219400 Sobic003G135400--Sobic007G219400 Sobic001G103000 Sobic001G103000 Sobic003G135400--Sobic001G103000 Sobic005G047100 Sobic005G047100 Sobic003G135400--Sobic005G047100 Sobic007G139500 Sobic007G139500 Sobic009G206500--Sobic007G139500 Sobic010G067800 Sobic010G067800 Sobic009G206500--Sobic010G067800 Sobic006G267500 Sobic006G267500 Sobic009G206500--Sobic006G267500 Sobic001G437500 Sobic001G437500 Sobic009G206500--Sobic001G437500 Sobic001G144200 Sobic001G144200 Sobic009G206500--Sobic001G144200 Sobic007G040301 Sobic007G040301 Sobic009G206500--Sobic007G040301 Sobic002G275500 Sobic002G275500 Sobic009G206500--Sobic002G275500 Sobic009G026101 Sobic009G026101 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600 Sobic003G420100--Sobic003G247600 Sobic004G233700 Sobic004G233700 Sobic003G420100--Sobic004G233700 Sobic009G242501 Sobic009G242501 Sobic003G420100--Sobic009G242501 Sobic007G208100 Sobic007G208100 Sobic003G420100--Sobic007G208100 Sobic004G286700 Sobic004G286700 Sobic003G420100--Sobic004G286700 Sobic003G420100--Sobic005G047100 Sobic003G420100--Sobic008G141200 Sobic003G420100--Sobic004G066900 Sobic003G420100--Sobic003G135400 Sobic008G168100 Sobic008G168100 Sobic009G059500--Sobic008G168100 Sobic002G271300 Sobic002G271300 Sobic009G059500--Sobic002G271300 Sobic002G186900 Sobic002G186900 Sobic009G059500--Sobic002G186900 Sobic008G126600 Sobic008G126600 Sobic009G059500--Sobic008G126600 Sobic003G294100 Sobic003G294100 Sobic009G059500--Sobic003G294100 Sobic009G059500--Sobic008G141200 Sobic001G228200 Sobic001G228200 Sobic009G059500--Sobic001G228200 Sobic004G054000 Sobic004G054000 Sobic009G059500--Sobic004G054000 Sobic007G044400 Sobic007G044400 Sobic009G059500--Sobic007G044400 Sobic003G247600--Sobic005G047100 Sobic003G247600--Sobic003G420100 Sobic003G247600--Sobic004G066900 Sobic003G247600--Sobic007G208100 Sobic003G247600--Sobic008G141200 Sobic003G247600--Sobic003G135400 Sobic003G052900 Sobic003G052900 Sobic003G247600--Sobic003G052900 Sobic003G345700 Sobic003G345700 Sobic003G247600--Sobic003G345700 Sobic006G119000 Sobic006G119000 Sobic003G247600--Sobic006G119000 Sobic010G180100 Sobic010G180100 Sobic010G131400--Sobic010G180100 Sobic002G254900 Sobic002G254900 Sobic010G131400--Sobic002G254900 Sobic001G360700 Sobic001G360700 Sobic010G131400--Sobic001G360700 Sobic001G002800 Sobic001G002800 Sobic010G131400--Sobic001G002800 Sobic002G167600 Sobic002G167600 Sobic010G131400--Sobic002G167600 Sobic006G180300 Sobic006G180300 Sobic010G131400--Sobic006G180300 Sobic010G131400--Sobic002G271300 Sobic010G131400--Sobic008G141200 Sobic001G406700 Sobic001G406700 Sobic010G131400--Sobic001G406700 Sobic006G102900 Sobic006G102900 Sobic009G189200--Sobic006G102900 Sobic001G261549 Sobic001G261549 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic009G189200--Sobic007G044400 Sobic004G285900 Sobic004G285900 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic003G122200 Sobic003G122200 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600 Sobic003G179500 Sobic003G179500 Sobic009G214100--Sobic003G179500 Sobic009G214100--Sobic007G139500 Sobic010G103700 Sobic010G103700 Sobic009G214100--Sobic010G103700 Sobic002G303800 Sobic002G303800 Sobic009G214100--Sobic002G303800 Sobic009G214100--Sobic005G144600 Sobic010G051100 Sobic010G051100 Sobic009G214100--Sobic010G051100 Sobic003G201000 Sobic003G201000 Sobic009G214100--Sobic003G201000 Sobic006G120600 Sobic006G120600 Sobic009G214100--Sobic006G120600 Sobic008G127550 Sobic008G127550 Sobic009G214100--Sobic008G127550 Sobic004G066900--Sobic003G247600 Sobic004G066900--Sobic003G135400 Sobic004G066900--Sobic003G420100 Sobic004G066900--Sobic008G141200 Sobic001G260701 Sobic001G260701 Sobic004G066900--Sobic001G260701 Sobic004G066900--Sobic005G047100 Sobic001G382700 Sobic001G382700 Sobic004G066900--Sobic001G382700 Sobic010G216600 Sobic010G216600 Sobic004G066900--Sobic010G216600 Sobic004G066900--Sobic009G242501
Octagon: transcription factors


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