Gene annotation
Transcriptome id Sobic.001G144200.1,Sobic.001G144200.2,Sobic.001G144200.3
Synonym Sb01g012570
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
DUF581 domain containing protein, expressed
UniProt C5WQD2 , C5WQC5
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22550 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os03g46260.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017165
Brachypodium KQK13240 , KQK13865 , KQK13864 , KQK13863 , PNT74344 , PNT74345 , PNT74342 , PNT74343 , PNT74340 , PNT74341
Barley HORVU4Hr1G002700.4 , HORVU4Hr1G002700.3 , HORVU4Hr1G002700.2 , HORVU4Hr1G002700.1
Wheat TraesCS4A02G295300 , TraesCS4B02G018400 , TraesCS4D02G016600
Populus -


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cDNA sequences
Sobic.001G144200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
2 Sobic.010G042600 transporter family protein, putative, expressed K15280: solute carrier family 35, member C2
3 Sobic.010G067800 integral membrane transporter family protein, putative, expressed -
4 Sobic.005G025900 "domain confirmed by Pfam database, expression supported by NCBI EST database,expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
5 Sobic.002G275500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.004G271500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
8 Sobic.007G040301 - -
9 Sobic.003G118100 EMB3013, putative, expressed K17545: serine/threonine-protein kinase ULK4
10 Sobic.001G402400 expressed protein -
11 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
12 Sobic.002G158900 AMP-binding domain containing protein, expressed -
13 Sobic.003G296500 leucine rich repeat family protein, putative, expressed -
14 Sobic.008G141200 DUF1336 domain containing protein, expressed -
15 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
16 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
17 Sobic.007G119500 expressed protein -
18 Sobic.003G052100 receptor-like protein kinase 2 precursor, putative, expressed -
19 Sobic.010G104400 cysteine-rich repeat secretory protein precursor, putative, expressed -
20 Sobic.001G301900 ZOS10-07 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic001G144200 Sobic001G144200 Sobic009G206500 Sobic009G206500 Sobic001G144200--Sobic009G206500 Sobic010G042600 Sobic010G042600 Sobic001G144200--Sobic010G042600 Sobic010G067800 Sobic010G067800 Sobic001G144200--Sobic010G067800 Sobic005G025900 Sobic005G025900 Sobic001G144200--Sobic005G025900 Sobic002G275500 Sobic002G275500 Sobic001G144200--Sobic002G275500 Sobic002G191000 Sobic002G191000 Sobic001G144200--Sobic002G191000 Sobic004G271500 Sobic004G271500 Sobic001G144200--Sobic004G271500 Sobic007G040301 Sobic007G040301 Sobic001G144200--Sobic007G040301 Sobic003G118100 Sobic003G118100 Sobic001G144200--Sobic003G118100 Sobic007G139500 Sobic007G139500 Sobic009G206500--Sobic007G139500 Sobic009G206500--Sobic010G067800 Sobic006G267500 Sobic006G267500 Sobic009G206500--Sobic006G267500 Sobic001G437500 Sobic001G437500 Sobic009G206500--Sobic001G437500 Sobic009G206500--Sobic001G144200 Sobic009G206500--Sobic007G040301 Sobic009G206500--Sobic002G275500 Sobic009G026101 Sobic009G026101 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600 Sobic010G042600--Sobic003G118100 Sobic010G042600--Sobic009G206500 Sobic010G042600--Sobic001G144200 Sobic010G042600--Sobic006G267500 Sobic003G266400 Sobic003G266400 Sobic010G042600--Sobic003G266400 Sobic010G018500 Sobic010G018500 Sobic010G042600--Sobic010G018500 Sobic001G196000 Sobic001G196000 Sobic010G042600--Sobic001G196000 Sobic006G035600 Sobic006G035600 Sobic010G042600--Sobic006G035600 Sobic001G500400 Sobic001G500400 Sobic010G042600--Sobic001G500400 Sobic010G067800--Sobic009G206500 Sobic006G120600 Sobic006G120600 Sobic010G067800--Sobic006G120600 Sobic010G067800--Sobic002G191000 Sobic010G067800--Sobic001G144200 Sobic010G067800--Sobic007G139500 Sobic004G270800 Sobic004G270800 Sobic010G067800--Sobic004G270800 Sobic009G087000 Sobic009G087000 Sobic010G067800--Sobic009G087000 Sobic007G113300 Sobic007G113300 Sobic010G067800--Sobic007G113300 Sobic004G119700 Sobic004G119700 Sobic010G067800--Sobic004G119700 Sobic004G233700 Sobic004G233700 Sobic005G025900--Sobic004G233700 Sobic007G050500 Sobic007G050500 Sobic005G025900--Sobic007G050500 Sobic005G025900--Sobic001G144200 Sobic007G111700 Sobic007G111700 Sobic005G025900--Sobic007G111700 Sobic002G158900 Sobic002G158900 Sobic005G025900--Sobic002G158900 Sobic001G355900 Sobic001G355900 Sobic005G025900--Sobic001G355900 Sobic005G231300 Sobic005G231300 Sobic005G025900--Sobic005G231300 Sobic002G016400 Sobic002G016400 Sobic005G025900--Sobic002G016400 Sobic001G402400 Sobic001G402400 Sobic005G025900--Sobic001G402400 Sobic002G275500--Sobic001G402400 Sobic003G052100 Sobic003G052100 Sobic002G275500--Sobic003G052100 Sobic002G275500--Sobic009G206500 Sobic002G275500--Sobic001G144200 Sobic003G296500 Sobic003G296500 Sobic002G275500--Sobic003G296500 Sobic002G275500--Sobic004G271500 Sobic003G270400 Sobic003G270400 Sobic002G275500--Sobic003G270400 Sobic002G275500--Sobic010G042600 Sobic007G119500 Sobic007G119500 Sobic002G275500--Sobic007G119500 Sobic002G191000--Sobic003G118100 Sobic002G191000--Sobic006G035600 Sobic010G051100 Sobic010G051100 Sobic002G191000--Sobic010G051100 Sobic001G029800 Sobic001G029800 Sobic002G191000--Sobic001G029800 Sobic010G008900 Sobic010G008900 Sobic002G191000--Sobic010G008900 Sobic001G070300 Sobic001G070300 Sobic002G191000--Sobic001G070300 Sobic010G274000 Sobic010G274000 Sobic002G191000--Sobic010G274000 Sobic002G191000--Sobic004G271500 Sobic009G181500 Sobic009G181500 Sobic002G191000--Sobic009G181500 Sobic001G403200 Sobic001G403200 Sobic004G271500--Sobic001G403200 Sobic004G271500--Sobic002G191000 Sobic010G176800 Sobic010G176800 Sobic004G271500--Sobic010G176800 Sobic004G271500--Sobic001G029800 Sobic009G079900 Sobic009G079900 Sobic004G271500--Sobic009G079900 Sobic004G271500--Sobic002G158900 Sobic001G314000 Sobic001G314000 Sobic004G271500--Sobic001G314000 Sobic002G020500 Sobic002G020500 Sobic004G271500--Sobic002G020500 Sobic004G271500--Sobic001G144200 Sobic007G040301--Sobic009G206500 Sobic007G040301--Sobic001G437500 Sobic007G040301--Sobic009G026101 Sobic007G040301--Sobic001G144200 Sobic001G406700 Sobic001G406700 Sobic007G040301--Sobic001G406700 Sobic008G141200 Sobic008G141200 Sobic007G040301--Sobic008G141200 Sobic004G274800 Sobic004G274800 Sobic007G040301--Sobic004G274800 Sobic009G151700 Sobic009G151700 Sobic007G040301--Sobic009G151700 Sobic007G040301--Sobic006G267500 Sobic003G118100--Sobic006G035600 Sobic003G118100--Sobic002G191000 Sobic003G118100--Sobic010G008900 Sobic008G148000 Sobic008G148000 Sobic003G118100--Sobic008G148000 Sobic005G000500 Sobic005G000500 Sobic003G118100--Sobic005G000500 Sobic007G125300 Sobic007G125300 Sobic003G118100--Sobic007G125300 Sobic001G131300 Sobic001G131300 Sobic003G118100--Sobic001G131300 Sobic003G294500 Sobic003G294500 Sobic003G118100--Sobic003G294500 Sobic003G118100--Sobic001G029800
Octagon: transcription factors


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