Gene annotation
Transcriptome id Sobic.010G067800.1
Synonym Sb10g005900
Functional annotation integral membrane transporter family protein, putative, expressed
UniProt C5Z5U9
Pfam PF03092
Panther DB PTHR31585 PTHR31585:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport


Orthologs (automatic annotation)
TAIR AT5G25050 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os06g08750.1 : integral membrane transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a049740 , Zm00025a047057
Brachypodium PNT64615 , KQK19229 , KQK19228
Barley HORVU5Hr1G064070.1 , HORVU5Hr1G064070.2 , HORVU5Hr1G064070.3 , HORVU5Hr1G064070.4 , HORVU5Hr1G064070.5 , HORVU5Hr1G064070.6 , HORVU5Hr1G064070.7 , HORVU5Hr1G064070.8 , HORVU5Hr1G064070.9 , HORVU7Hr1G031180.4 , HORVU7Hr1G031180.5 , HORVU7Hr1G031180.6 , HORVU7Hr1G031180.7 , HORVU7Hr1G031180.1 , HORVU7Hr1G031180.2 , HORVU7Hr1G031180.3 , HORVU7Hr1G031180.8 , HORVU5Hr1G064070.10 , HORVU5Hr1G064070.11
Wheat TraesCS7A02G151400 , TraesCS7B02G055400 , TraesCS5D02G229800 , TraesCS7D02G153300 , TraesCS5B02G220800 , TraesCS5A02G222000 , TraesCS5A02G222000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
2 Sobic.006G120600 AAA-type ATPase family protein, putative, expressed -
3 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
4 Sobic.001G144200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
5 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
6 Sobic.004G270800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD repeat-containing protein, putative, expressed K03363: cell division cycle 20, cofactor of APC complex
7 Sobic.009G087000 MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed K02542: DNA replication licensing factor MCM6
8 Sobic.007G113300 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
9 Sobic.004G119700 WD repeat-containing protein, putative, expressed K03363: cell division cycle 20, cofactor of APC complex
10 Sobic.002G383100 expressed protein -
11 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
12 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
13 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
14 Sobic.008G127550 - -
15 Sobic.010G054100 SHR5-receptor-like kinase, putative, expressed -
16 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
17 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1
18 Sobic.009G146250 - -
19 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
20 Sobic.006G029300 expressed protein K15505: DNA repair protein RAD5


Gene co-expression network
sample Sobic010G067800 Sobic010G067800 Sobic009G206500 Sobic009G206500 Sobic010G067800--Sobic009G206500 Sobic006G120600 Sobic006G120600 Sobic010G067800--Sobic006G120600 Sobic002G191000 Sobic002G191000 Sobic010G067800--Sobic002G191000 Sobic001G144200 Sobic001G144200 Sobic010G067800--Sobic001G144200 Sobic007G139500 Sobic007G139500 Sobic010G067800--Sobic007G139500 Sobic004G270800 Sobic004G270800 Sobic010G067800--Sobic004G270800 Sobic009G087000 Sobic009G087000 Sobic010G067800--Sobic009G087000 Sobic007G113300 Sobic007G113300 Sobic010G067800--Sobic007G113300 Sobic004G119700 Sobic004G119700 Sobic010G067800--Sobic004G119700 Sobic009G206500--Sobic007G139500 Sobic009G206500--Sobic010G067800 Sobic006G267500 Sobic006G267500 Sobic009G206500--Sobic006G267500 Sobic001G437500 Sobic001G437500 Sobic009G206500--Sobic001G437500 Sobic009G206500--Sobic001G144200 Sobic007G040301 Sobic007G040301 Sobic009G206500--Sobic007G040301 Sobic002G275500 Sobic002G275500 Sobic009G206500--Sobic002G275500 Sobic009G026101 Sobic009G026101 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600 Sobic010G103700 Sobic010G103700 Sobic006G120600--Sobic010G103700 Sobic003G183700 Sobic003G183700 Sobic006G120600--Sobic003G183700 Sobic006G195500 Sobic006G195500 Sobic006G120600--Sobic006G195500 Sobic002G290000 Sobic002G290000 Sobic006G120600--Sobic002G290000 Sobic002G303800 Sobic002G303800 Sobic006G120600--Sobic002G303800 Sobic003G179500 Sobic003G179500 Sobic006G120600--Sobic003G179500 Sobic007G125300 Sobic007G125300 Sobic006G120600--Sobic007G125300 Sobic006G120600--Sobic009G087000 Sobic006G051000 Sobic006G051000 Sobic006G120600--Sobic006G051000 Sobic003G118100 Sobic003G118100 Sobic002G191000--Sobic003G118100 Sobic006G035600 Sobic006G035600 Sobic002G191000--Sobic006G035600 Sobic010G051100 Sobic010G051100 Sobic002G191000--Sobic010G051100 Sobic001G029800 Sobic001G029800 Sobic002G191000--Sobic001G029800 Sobic010G008900 Sobic010G008900 Sobic002G191000--Sobic010G008900 Sobic001G070300 Sobic001G070300 Sobic002G191000--Sobic001G070300 Sobic010G274000 Sobic010G274000 Sobic002G191000--Sobic010G274000 Sobic004G271500 Sobic004G271500 Sobic002G191000--Sobic004G271500 Sobic009G181500 Sobic009G181500 Sobic002G191000--Sobic009G181500 Sobic001G144200--Sobic009G206500 Sobic010G042600 Sobic010G042600 Sobic001G144200--Sobic010G042600 Sobic001G144200--Sobic010G067800 Sobic005G025900 Sobic005G025900 Sobic001G144200--Sobic005G025900 Sobic001G144200--Sobic002G275500 Sobic001G144200--Sobic002G191000 Sobic001G144200--Sobic004G271500 Sobic001G144200--Sobic007G040301 Sobic001G144200--Sobic003G118100 Sobic001G196000 Sobic001G196000 Sobic007G139500--Sobic001G196000 Sobic001G051300 Sobic001G051300 Sobic007G139500--Sobic001G051300 Sobic007G139500--Sobic009G206500 Sobic007G139500--Sobic001G437500 Sobic007G139500--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G139500--Sobic001G103000 Sobic003G017500 Sobic003G017500 Sobic007G139500--Sobic003G017500 Sobic007G139500--Sobic002G191000 Sobic009G214100 Sobic009G214100 Sobic007G139500--Sobic009G214100 Sobic004G270800--Sobic004G119700 Sobic004G270800--Sobic009G087000 Sobic004G270800--Sobic003G183700 Sobic005G110535 Sobic005G110535 Sobic004G270800--Sobic005G110535 Sobic010G147700 Sobic010G147700 Sobic004G270800--Sobic010G147700 Sobic003G369200 Sobic003G369200 Sobic004G270800--Sobic003G369200 Sobic004G270800--Sobic006G051000 Sobic004G270800--Sobic006G195500 Sobic008G129200 Sobic008G129200 Sobic004G270800--Sobic008G129200 Sobic009G087000--Sobic010G147700 Sobic009G087000--Sobic003G183700 Sobic009G087000--Sobic005G110535 Sobic009G087000--Sobic008G129200 Sobic006G029300 Sobic006G029300 Sobic009G087000--Sobic006G029300 Sobic009G087000--Sobic003G369200 Sobic004G321400 Sobic004G321400 Sobic009G087000--Sobic004G321400 Sobic004G331600 Sobic004G331600 Sobic009G087000--Sobic004G331600 Sobic009G087000--Sobic003G179500 Sobic004G233700 Sobic004G233700 Sobic007G113300--Sobic004G233700 Sobic002G218600 Sobic002G218600 Sobic007G113300--Sobic002G218600 Sobic008G100700 Sobic008G100700 Sobic007G113300--Sobic008G100700 Sobic001G304800 Sobic001G304800 Sobic007G113300--Sobic001G304800 Sobic004G286700 Sobic004G286700 Sobic007G113300--Sobic004G286700 Sobic007G113300--Sobic010G067800 Sobic007G113300--Sobic010G103700 Sobic007G113300--Sobic003G179500 Sobic008G090000 Sobic008G090000 Sobic007G113300--Sobic008G090000 Sobic004G119700--Sobic004G270800 Sobic010G054600 Sobic010G054600 Sobic004G119700--Sobic010G054600 Sobic001G142000 Sobic001G142000 Sobic004G119700--Sobic001G142000 Sobic004G119700--Sobic003G369200 Sobic004G119700--Sobic008G129200 Sobic004G119700--Sobic010G147700 Sobic004G119700--Sobic004G331600 Sobic004G119700--Sobic005G110535 Sobic004G119700--Sobic009G087000
Octagon: transcription factors


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