Gene annotation
Transcriptome id Sobic.010G054100.1
Synonym Sb10g004730
Functional annotation SHR5-receptor-like kinase, putative, expressed
UniProt A0A194YHG2
Pfam PF11721
Panther DB PTHR27006 PTHR27006:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56140 : Leucine-rich repeat transmembrane protein kinase
RAP-DB (Rice) LOC_Os06g07130.1 : SHR5-receptor-like kinase, putative, expressed
MaizeGDB (Corn) Zm00025a041651
Brachypodium KQK19430 , KQK19425 , KQK19427 , KQK19426 , KQK19429 , KQK19428
Barley -
Wheat TraesCS7B02G030700 , TraesCS7D02G129800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G270800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD repeat-containing protein, putative, expressed K03363: cell division cycle 20, cofactor of APC complex
2 Sobic.010G067800 integral membrane transporter family protein, putative, expressed -
3 Sobic.006G172200 glycosyl transferase 8 domain containing protein, putative, expressed -
4 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
5 Sobic.003G017500 TTL1, putative, expressed -
6 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
7 Sobic.002G383100 expressed protein -
8 Sobic.001G159800 KIP1, putative, expressed -
9 Sobic.008G127550 - -
10 Sobic.001G051300 BEE 1, putative, expressed -
11 Sobic.006G071628 - -
12 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
13 Sobic.009G061000 DNA binding protein, putative, expressed -
14 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
15 Sobic.004G156200 POLE1 - Putative DNA polymerase epsilon catalytic subunit, expressed K02324: DNA polymerase epsilon subunit 1
16 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
17 Sobic.004G119700 WD repeat-containing protein, putative, expressed K03363: cell division cycle 20, cofactor of APC complex
18 Sobic.003G118100 EMB3013, putative, expressed K17545: serine/threonine-protein kinase ULK4
19 Sobic.007G044400 MSP domain containing protein, expressed -
20 Sobic.001G507200 PIR, putative, expressed K05749: cytoplasmic FMR1 interacting protein


Gene co-expression network
sample Sobic010G054100 Sobic010G054100 Sobic004G270800 Sobic004G270800 Sobic010G054100--Sobic004G270800 Sobic010G067800 Sobic010G067800 Sobic010G054100--Sobic010G067800 Sobic006G172200 Sobic006G172200 Sobic010G054100--Sobic006G172200 Sobic009G073400 Sobic009G073400 Sobic010G054100--Sobic009G073400 Sobic003G017500 Sobic003G017500 Sobic010G054100--Sobic003G017500 Sobic007G139500 Sobic007G139500 Sobic010G054100--Sobic007G139500 Sobic002G383100 Sobic002G383100 Sobic010G054100--Sobic002G383100 Sobic001G159800 Sobic001G159800 Sobic010G054100--Sobic001G159800 Sobic008G127550 Sobic008G127550 Sobic010G054100--Sobic008G127550 Sobic004G119700 Sobic004G119700 Sobic004G270800--Sobic004G119700 Sobic009G087000 Sobic009G087000 Sobic004G270800--Sobic009G087000 Sobic003G183700 Sobic003G183700 Sobic004G270800--Sobic003G183700 Sobic005G110535 Sobic005G110535 Sobic004G270800--Sobic005G110535 Sobic010G147700 Sobic010G147700 Sobic004G270800--Sobic010G147700 Sobic003G369200 Sobic003G369200 Sobic004G270800--Sobic003G369200 Sobic006G051000 Sobic006G051000 Sobic004G270800--Sobic006G051000 Sobic006G195500 Sobic006G195500 Sobic004G270800--Sobic006G195500 Sobic008G129200 Sobic008G129200 Sobic004G270800--Sobic008G129200 Sobic009G206500 Sobic009G206500 Sobic010G067800--Sobic009G206500 Sobic006G120600 Sobic006G120600 Sobic010G067800--Sobic006G120600 Sobic002G191000 Sobic002G191000 Sobic010G067800--Sobic002G191000 Sobic001G144200 Sobic001G144200 Sobic010G067800--Sobic001G144200 Sobic010G067800--Sobic007G139500 Sobic010G067800--Sobic004G270800 Sobic010G067800--Sobic009G087000 Sobic007G113300 Sobic007G113300 Sobic010G067800--Sobic007G113300 Sobic010G067800--Sobic004G119700 Sobic006G172200--Sobic009G073400 Sobic006G172200--Sobic010G054100 Sobic006G144700 Sobic006G144700 Sobic006G172200--Sobic006G144700 Sobic003G345200 Sobic003G345200 Sobic006G172200--Sobic003G345200 Sobic006G172200--Sobic010G067800 Sobic006G172200--Sobic004G119700 Sobic002G214200 Sobic002G214200 Sobic006G172200--Sobic002G214200 Sobic002G351700 Sobic002G351700 Sobic006G172200--Sobic002G351700 Sobic001G507000 Sobic001G507000 Sobic006G172200--Sobic001G507000 Sobic009G061000 Sobic009G061000 Sobic009G073400--Sobic009G061000 Sobic009G073400--Sobic003G345200 Sobic009G073400--Sobic003G017500 Sobic006G173200 Sobic006G173200 Sobic009G073400--Sobic006G173200 Sobic009G073400--Sobic001G159800 Sobic009G073400--Sobic006G172200 Sobic004G146300 Sobic004G146300 Sobic009G073400--Sobic004G146300 Sobic009G073400--Sobic009G206500 Sobic010G090500 Sobic010G090500 Sobic009G073400--Sobic010G090500 Sobic003G017500--Sobic002G383100 Sobic001G051300 Sobic001G051300 Sobic003G017500--Sobic001G051300 Sobic007G130900 Sobic007G130900 Sobic003G017500--Sobic007G130900 Sobic001G437500 Sobic001G437500 Sobic003G017500--Sobic001G437500 Sobic003G017500--Sobic007G139500 Sobic003G017500--Sobic009G073400 Sobic003G017500--Sobic009G206500 Sobic003G017500--Sobic001G159800 Sobic003G410600 Sobic003G410600 Sobic003G017500--Sobic003G410600 Sobic001G196000 Sobic001G196000 Sobic007G139500--Sobic001G196000 Sobic007G139500--Sobic001G051300 Sobic007G139500--Sobic009G206500 Sobic007G139500--Sobic001G437500 Sobic003G179500 Sobic003G179500 Sobic007G139500--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G139500--Sobic001G103000 Sobic007G139500--Sobic003G017500 Sobic007G139500--Sobic002G191000 Sobic009G214100 Sobic009G214100 Sobic007G139500--Sobic009G214100 Sobic003G289800 Sobic003G289800 Sobic002G383100--Sobic003G289800 Sobic002G383100--Sobic009G087000 Sobic002G383100--Sobic001G051300 Sobic002G383100--Sobic010G147700 Sobic002G383100--Sobic003G017500 Sobic002G383100--Sobic003G179500 Sobic003G032200 Sobic003G032200 Sobic002G383100--Sobic003G032200 Sobic002G383100--Sobic003G183700 Sobic004G315700 Sobic004G315700 Sobic002G383100--Sobic004G315700 Sobic001G159800--Sobic010G090500 Sobic001G159800--Sobic001G437500 Sobic001G159800--Sobic009G061000 Sobic001G159800--Sobic009G206500 Sobic001G159800--Sobic009G073400 Sobic001G159800--Sobic003G017500 Sobic001G159800--Sobic001G196000 Sobic001G159800--Sobic006G173200 Sobic001G507200 Sobic001G507200 Sobic001G159800--Sobic001G507200 Sobic003G420300 Sobic003G420300 Sobic008G127550--Sobic003G420300 Sobic002G320600 Sobic002G320600 Sobic008G127550--Sobic002G320600 Sobic003G226700 Sobic003G226700 Sobic008G127550--Sobic003G226700 Sobic006G281400 Sobic006G281400 Sobic008G127550--Sobic006G281400 Sobic003G292700 Sobic003G292700 Sobic008G127550--Sobic003G292700 Sobic008G127550--Sobic001G051300 Sobic004G243900 Sobic004G243900 Sobic008G127550--Sobic004G243900 Sobic008G127550--Sobic007G139500 Sobic009G052100 Sobic009G052100 Sobic008G127550--Sobic009G052100
Octagon: transcription factors


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