Gene annotation
Transcriptome id Sobic.003G017500.1
Synonym Sb03g001720, VIT, TTL3
Functional annotation TTL1, putative, expressed
UniProt C5XKG8
Pfam PF00085 PF13414
Panther DB PTHR22904 PTHR22904:SF366
NCBI CDD KOG0548; Molecular co-chaperone STI1 KOG0907Thioredoxin
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42580 : tetratricopetide-repeat thioredoxin-like 3
RAP-DB (Rice) LOC_Os05g11990.1 : TTL1, putative, expressed
MaizeGDB (Corn) Zm00025a021767 , Zm00025a021766 , Zm00025a008581 , Zm00025a016106 , Zm00025a035919 , Zm00025a006683 , Zm00025a006682 , Zm00025a022895
Brachypodium -
Barley -
Wheat TraesCS1D02G437100 , TraesCS1D02G437100 , TraesCS3A02G143000 , TraesCS3B02G162100 , TraesCS3D02G144600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G383100 expressed protein -
2 Sobic.001G051300 BEE 1, putative, expressed -
3 Sobic.007G130900 expressed protein -
4 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
5 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
6 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
7 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
8 Sobic.001G159800 KIP1, putative, expressed -
9 Sobic.003G410600 exostosin family domain containing protein, expressed -
10 Sobic.006G071628 - -
11 Sobic.004G286700 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.009G061000 DNA binding protein, putative, expressed -
13 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
14 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
15 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
16 Sobic.010G090500 expressed protein -
17 Sobic.010G054100 SHR5-receptor-like kinase, putative, expressed -
18 Sobic.009G151700 protein of unknown function DUF502 domain containing protein, expressed -
19 Sobic.008G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
20 Sobic.010G067600 expressed protein K16586: HAUS augmin-like complex subunit 3


Gene co-expression network
sample Sobic003G017500 Sobic003G017500 Sobic002G383100 Sobic002G383100 Sobic003G017500--Sobic002G383100 Sobic001G051300 Sobic001G051300 Sobic003G017500--Sobic001G051300 Sobic007G130900 Sobic007G130900 Sobic003G017500--Sobic007G130900 Sobic001G437500 Sobic001G437500 Sobic003G017500--Sobic001G437500 Sobic007G139500 Sobic007G139500 Sobic003G017500--Sobic007G139500 Sobic009G073400 Sobic009G073400 Sobic003G017500--Sobic009G073400 Sobic009G206500 Sobic009G206500 Sobic003G017500--Sobic009G206500 Sobic001G159800 Sobic001G159800 Sobic003G017500--Sobic001G159800 Sobic003G410600 Sobic003G410600 Sobic003G017500--Sobic003G410600 Sobic003G289800 Sobic003G289800 Sobic002G383100--Sobic003G289800 Sobic009G087000 Sobic009G087000 Sobic002G383100--Sobic009G087000 Sobic002G383100--Sobic001G051300 Sobic010G147700 Sobic010G147700 Sobic002G383100--Sobic010G147700 Sobic002G383100--Sobic003G017500 Sobic003G179500 Sobic003G179500 Sobic002G383100--Sobic003G179500 Sobic003G032200 Sobic003G032200 Sobic002G383100--Sobic003G032200 Sobic003G183700 Sobic003G183700 Sobic002G383100--Sobic003G183700 Sobic004G315700 Sobic004G315700 Sobic002G383100--Sobic004G315700 Sobic001G051300--Sobic003G289800 Sobic001G051300--Sobic002G383100 Sobic001G051300--Sobic007G139500 Sobic001G051300--Sobic009G087000 Sobic006G071628 Sobic006G071628 Sobic001G051300--Sobic006G071628 Sobic001G051300--Sobic003G179500 Sobic001G051300--Sobic010G147700 Sobic001G051300--Sobic003G017500 Sobic003G201000 Sobic003G201000 Sobic001G051300--Sobic003G201000 Sobic007G130900--Sobic003G017500 Sobic005G110600 Sobic005G110600 Sobic007G130900--Sobic005G110600 Sobic006G245600 Sobic006G245600 Sobic007G130900--Sobic006G245600 Sobic004G156900 Sobic004G156900 Sobic007G130900--Sobic004G156900 Sobic003G420100 Sobic003G420100 Sobic007G130900--Sobic003G420100 Sobic006G054600 Sobic006G054600 Sobic007G130900--Sobic006G054600 Sobic002G016400 Sobic002G016400 Sobic007G130900--Sobic002G016400 Sobic003G277200 Sobic003G277200 Sobic007G130900--Sobic003G277200 Sobic008G039800 Sobic008G039800 Sobic007G130900--Sobic008G039800 Sobic001G196000 Sobic001G196000 Sobic001G437500--Sobic001G196000 Sobic004G243800 Sobic004G243800 Sobic001G437500--Sobic004G243800 Sobic004G274800 Sobic004G274800 Sobic001G437500--Sobic004G274800 Sobic001G437500--Sobic009G206500 Sobic001G437500--Sobic007G139500 Sobic001G437500--Sobic001G159800 Sobic009G061000 Sobic009G061000 Sobic001G437500--Sobic009G061000 Sobic006G267500 Sobic006G267500 Sobic001G437500--Sobic006G267500 Sobic002G276600 Sobic002G276600 Sobic001G437500--Sobic002G276600 Sobic007G139500--Sobic001G196000 Sobic007G139500--Sobic001G051300 Sobic007G139500--Sobic009G206500 Sobic007G139500--Sobic001G437500 Sobic007G139500--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G139500--Sobic001G103000 Sobic007G139500--Sobic003G017500 Sobic002G191000 Sobic002G191000 Sobic007G139500--Sobic002G191000 Sobic009G214100 Sobic009G214100 Sobic007G139500--Sobic009G214100 Sobic009G073400--Sobic009G061000 Sobic003G345200 Sobic003G345200 Sobic009G073400--Sobic003G345200 Sobic009G073400--Sobic003G017500 Sobic006G173200 Sobic006G173200 Sobic009G073400--Sobic006G173200 Sobic009G073400--Sobic001G159800 Sobic006G172200 Sobic006G172200 Sobic009G073400--Sobic006G172200 Sobic004G146300 Sobic004G146300 Sobic009G073400--Sobic004G146300 Sobic009G073400--Sobic009G206500 Sobic010G090500 Sobic010G090500 Sobic009G073400--Sobic010G090500 Sobic009G206500--Sobic007G139500 Sobic010G067800 Sobic010G067800 Sobic009G206500--Sobic010G067800 Sobic009G206500--Sobic006G267500 Sobic009G206500--Sobic001G437500 Sobic001G144200 Sobic001G144200 Sobic009G206500--Sobic001G144200 Sobic007G040301 Sobic007G040301 Sobic009G206500--Sobic007G040301 Sobic002G275500 Sobic002G275500 Sobic009G206500--Sobic002G275500 Sobic009G026101 Sobic009G026101 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600 Sobic001G159800--Sobic010G090500 Sobic001G159800--Sobic001G437500 Sobic001G159800--Sobic009G061000 Sobic001G159800--Sobic009G206500 Sobic001G159800--Sobic009G073400 Sobic001G159800--Sobic003G017500 Sobic001G159800--Sobic001G196000 Sobic001G159800--Sobic006G173200 Sobic001G507200 Sobic001G507200 Sobic001G159800--Sobic001G507200 Sobic003G294500 Sobic003G294500 Sobic003G410600--Sobic003G294500 Sobic003G013000 Sobic003G013000 Sobic003G410600--Sobic003G013000 Sobic005G144600 Sobic005G144600 Sobic003G410600--Sobic005G144600 Sobic001G177900 Sobic001G177900 Sobic003G410600--Sobic001G177900 Sobic003G135400 Sobic003G135400 Sobic003G410600--Sobic003G135400 Sobic003G314900 Sobic003G314900 Sobic003G410600--Sobic003G314900 Sobic007G168900 Sobic007G168900 Sobic003G410600--Sobic007G168900 Sobic010G008900 Sobic010G008900 Sobic003G410600--Sobic010G008900 Sobic001G029800 Sobic001G029800 Sobic003G410600--Sobic001G029800
Octagon: transcription factors


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