Gene annotation
Transcriptome id Sobic.009G189200.1
Synonym Sb09g024810, SC3
Functional annotation secretory carrier-associated membrane protein, putative, expressed
UniProt C5Z0Q8
Pfam PF04144
Panther DB PTHR10687 PTHR10687:SF18
NCBI CDD KOG3088; Secretory carrier membrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015031protein transport


Orthologs (automatic annotation)
TAIR AT1G61250 : secretory carrier 3
RAP-DB (Rice) LOC_Os05g42330.1 : secretory carrier-associated membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a037897 , Zm00025a044147 , Zm00025a044699
Brachypodium KQK05526 , KQK10072
Barley -
Wheat TraesCS3A02G317400 , TraesCS1B02G336000 , TraesCS3D02G313900
Populus -


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cDNA sequences
Sobic.009G189200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G102900 expressed protein -
2 Sobic.001G261549 - -
3 Sobic.002G057500 C-Myc-binding protein, putative, expressed -
4 Sobic.010G144900 fiber protein Fb34, putative, expressed -
5 Sobic.007G044400 MSP domain containing protein, expressed -
6 Sobic.004G285900 HMG1/2, putative, expressed -
7 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
8 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
9 Sobic.001G131600 expressed protein -
10 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
11 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
12 Sobic.003G072900 OsRhmbd18 - Putative Rhomboid homologue, expressed -
13 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
14 Sobic.008G141200 DUF1336 domain containing protein, expressed -
15 Sobic.006G191700 expansin precursor, putative, expressed -
16 Sobic.009G119700 acetyltransferase, GNAT family, putative, expressed -
17 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
18 Sobic.003G444200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
19 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
20 Sobic.010G004900 CWC15 homolog A, putative, expressed K12863: protein CWC15


Gene co-expression network
sample Sobic009G189200 Sobic009G189200 Sobic006G102900 Sobic006G102900 Sobic009G189200--Sobic006G102900 Sobic001G261549 Sobic001G261549 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic007G044400 Sobic007G044400 Sobic009G189200--Sobic007G044400 Sobic004G285900 Sobic004G285900 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic003G122200 Sobic003G122200 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600 Sobic001G078600 Sobic001G078600 Sobic006G102900--Sobic001G078600 Sobic003G107200 Sobic003G107200 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic006G102900--Sobic001G261549 Sobic007G154500 Sobic007G154500 Sobic006G102900--Sobic007G154500 Sobic002G426800 Sobic002G426800 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic004G047100 Sobic004G047100 Sobic006G102900--Sobic004G047100 Sobic006G102900--Sobic009G189200 Sobic001G261549--Sobic006G102900 Sobic001G261549--Sobic004G285900 Sobic001G261549--Sobic009G189200 Sobic006G191700 Sobic006G191700 Sobic001G261549--Sobic006G191700 Sobic009G194900 Sobic009G194900 Sobic001G261549--Sobic009G194900 Sobic001G261549--Sobic003G107200 Sobic001G261549--Sobic001G078600 Sobic001G261549--Sobic007G154500 Sobic008G096200 Sobic008G096200 Sobic001G261549--Sobic008G096200 Sobic002G057500--Sobic009G189200 Sobic002G057500--Sobic001G261549 Sobic010G265900 Sobic010G265900 Sobic002G057500--Sobic010G265900 Sobic003G011100 Sobic003G011100 Sobic002G057500--Sobic003G011100 Sobic002G057500--Sobic006G102900 Sobic002G057500--Sobic004G285900 Sobic009G088200 Sobic009G088200 Sobic002G057500--Sobic009G088200 Sobic006G278100 Sobic006G278100 Sobic002G057500--Sobic006G278100 Sobic002G057500--Sobic006G191700 Sobic010G144900--Sobic009G189200 Sobic006G104100 Sobic006G104100 Sobic010G144900--Sobic006G104100 Sobic001G397000 Sobic001G397000 Sobic010G144900--Sobic001G397000 Sobic006G120700 Sobic006G120700 Sobic010G144900--Sobic006G120700 Sobic009G059500 Sobic009G059500 Sobic010G144900--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic010G144900--Sobic002G186900 Sobic010G144900--Sobic007G044400 Sobic002G236700 Sobic002G236700 Sobic010G144900--Sobic002G236700 Sobic001G371100 Sobic001G371100 Sobic010G144900--Sobic001G371100 Sobic001G196100 Sobic001G196100 Sobic007G044400--Sobic001G196100 Sobic007G044400--Sobic009G189200 Sobic001G116000 Sobic001G116000 Sobic007G044400--Sobic001G116000 Sobic001G026600 Sobic001G026600 Sobic007G044400--Sobic001G026600 Sobic002G313600 Sobic002G313600 Sobic007G044400--Sobic002G313600 Sobic007G044400--Sobic006G102900 Sobic007G044400--Sobic009G059500 Sobic007G044400--Sobic002G186900 Sobic007G183800 Sobic007G183800 Sobic007G044400--Sobic007G183800 Sobic004G285900--Sobic001G078600 Sobic004G285900--Sobic001G261549 Sobic004G279601 Sobic004G279601 Sobic004G285900--Sobic004G279601 Sobic007G214700 Sobic007G214700 Sobic004G285900--Sobic007G214700 Sobic004G285900--Sobic006G102900 Sobic002G162300 Sobic002G162300 Sobic004G285900--Sobic002G162300 Sobic004G285900--Sobic007G154500 Sobic004G285900--Sobic009G189200 Sobic001G205000 Sobic001G205000 Sobic004G285900--Sobic001G205000 Sobic001G157800 Sobic001G157800 Sobic003G084300--Sobic001G157800 Sobic009G165500 Sobic009G165500 Sobic003G084300--Sobic009G165500 Sobic003G084300--Sobic009G189200 Sobic003G084300--Sobic003G011100 Sobic002G385400 Sobic002G385400 Sobic003G084300--Sobic002G385400 Sobic003G084300--Sobic010G265900 Sobic002G258300 Sobic002G258300 Sobic003G084300--Sobic002G258300 Sobic006G200000 Sobic006G200000 Sobic003G084300--Sobic006G200000 Sobic003G084300--Sobic006G102900 Sobic001G475500 Sobic001G475500 Sobic003G122200--Sobic001G475500 Sobic001G418100 Sobic001G418100 Sobic003G122200--Sobic001G418100 Sobic007G150800 Sobic007G150800 Sobic003G122200--Sobic007G150800 Sobic005G112800 Sobic005G112800 Sobic003G122200--Sobic005G112800 Sobic003G034600 Sobic003G034600 Sobic003G122200--Sobic003G034600 Sobic010G264300 Sobic010G264300 Sobic003G122200--Sobic010G264300 Sobic001G038300 Sobic001G038300 Sobic003G122200--Sobic001G038300 Sobic004G055700 Sobic004G055700 Sobic003G122200--Sobic004G055700 Sobic001G040100 Sobic001G040100 Sobic003G122200--Sobic001G040100 Sobic001G131600--Sobic009G189200 Sobic002G350400 Sobic002G350400 Sobic001G131600--Sobic002G350400 Sobic001G131600--Sobic003G122200 Sobic001G131600--Sobic006G102900 Sobic005G047100 Sobic005G047100 Sobic001G131600--Sobic005G047100 Sobic001G131600--Sobic004G285900 Sobic003G135400 Sobic003G135400 Sobic001G131600--Sobic003G135400 Sobic002G111500 Sobic002G111500 Sobic001G131600--Sobic002G111500 Sobic003G364900 Sobic003G364900 Sobic001G131600--Sobic003G364900
Octagon: transcription factors


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