Gene annotation
Transcriptome id Sobic.002G057500.1
Synonym
Functional annotation C-Myc-binding protein, putative, expressed
UniProt A0A1B6Q9G9
Pfam -
Panther DB PTHR13168 PTHR13168:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003713transcription coactivator activity


Orthologs (automatic annotation)
TAIR AT2G14045 : -
RAP-DB (Rice) LOC_Os07g08820.1 : C-Myc-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a045217
Brachypodium KQK20534
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
2 Sobic.001G261549 - -
3 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
4 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
5 Sobic.006G102900 expressed protein -
6 Sobic.004G285900 HMG1/2, putative, expressed -
7 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
8 Sobic.006G278100 expressed protein -
9 Sobic.006G191700 expansin precursor, putative, expressed -
10 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
11 Sobic.002G258300 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.001G459900 leucine-rich repeat resistance protein, putative, expressed -
13 Sobic.007G150800 expressed protein -
14 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
15 Sobic.009G119700 acetyltransferase, GNAT family, putative, expressed -
16 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
17 Sobic.007G154500 F-box protein, putative, expressed -
18 Sobic.001G412500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K18732: SARNP, CIP29, SAP domain-containing ribonucleoprotein
19 Sobic.009G194900 glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed -
20 Sobic.010G004900 CWC15 homolog A, putative, expressed K12863: protein CWC15


Gene co-expression network
sample Sobic002G057500 Sobic002G057500 Sobic009G189200 Sobic009G189200 Sobic002G057500--Sobic009G189200 Sobic001G261549 Sobic001G261549 Sobic002G057500--Sobic001G261549 Sobic010G265900 Sobic010G265900 Sobic002G057500--Sobic010G265900 Sobic003G011100 Sobic003G011100 Sobic002G057500--Sobic003G011100 Sobic006G102900 Sobic006G102900 Sobic002G057500--Sobic006G102900 Sobic004G285900 Sobic004G285900 Sobic002G057500--Sobic004G285900 Sobic009G088200 Sobic009G088200 Sobic002G057500--Sobic009G088200 Sobic006G278100 Sobic006G278100 Sobic002G057500--Sobic006G278100 Sobic006G191700 Sobic006G191700 Sobic002G057500--Sobic006G191700 Sobic009G189200--Sobic006G102900 Sobic009G189200--Sobic001G261549 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic007G044400 Sobic007G044400 Sobic009G189200--Sobic007G044400 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic003G122200 Sobic003G122200 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600 Sobic001G261549--Sobic006G102900 Sobic001G261549--Sobic004G285900 Sobic001G261549--Sobic009G189200 Sobic001G261549--Sobic006G191700 Sobic009G194900 Sobic009G194900 Sobic001G261549--Sobic009G194900 Sobic003G107200 Sobic003G107200 Sobic001G261549--Sobic003G107200 Sobic001G078600 Sobic001G078600 Sobic001G261549--Sobic001G078600 Sobic007G154500 Sobic007G154500 Sobic001G261549--Sobic007G154500 Sobic008G096200 Sobic008G096200 Sobic001G261549--Sobic008G096200 Sobic006G200000 Sobic006G200000 Sobic010G265900--Sobic006G200000 Sobic005G120500 Sobic005G120500 Sobic010G265900--Sobic005G120500 Sobic010G265900--Sobic006G102900 Sobic005G080900 Sobic005G080900 Sobic010G265900--Sobic005G080900 Sobic010G265900--Sobic003G084300 Sobic010G265900--Sobic009G189200 Sobic006G120700 Sobic006G120700 Sobic010G265900--Sobic006G120700 Sobic001G157800 Sobic001G157800 Sobic010G265900--Sobic001G157800 Sobic004G344500 Sobic004G344500 Sobic010G265900--Sobic004G344500 Sobic007G150800 Sobic007G150800 Sobic003G011100--Sobic007G150800 Sobic006G216600 Sobic006G216600 Sobic003G011100--Sobic006G216600 Sobic001G475500 Sobic001G475500 Sobic003G011100--Sobic001G475500 Sobic006G201500 Sobic006G201500 Sobic003G011100--Sobic006G201500 Sobic003G396600 Sobic003G396600 Sobic003G011100--Sobic003G396600 Sobic009G144300 Sobic009G144300 Sobic003G011100--Sobic009G144300 Sobic006G115000 Sobic006G115000 Sobic003G011100--Sobic006G115000 Sobic003G387900 Sobic003G387900 Sobic003G011100--Sobic003G387900 Sobic009G233400 Sobic009G233400 Sobic003G011100--Sobic009G233400 Sobic006G102900--Sobic001G078600 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic006G102900--Sobic001G261549 Sobic006G102900--Sobic007G154500 Sobic002G426800 Sobic002G426800 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic004G047100 Sobic004G047100 Sobic006G102900--Sobic004G047100 Sobic006G102900--Sobic009G189200 Sobic004G285900--Sobic001G078600 Sobic004G285900--Sobic001G261549 Sobic004G279601 Sobic004G279601 Sobic004G285900--Sobic004G279601 Sobic007G214700 Sobic007G214700 Sobic004G285900--Sobic007G214700 Sobic004G285900--Sobic006G102900 Sobic002G162300 Sobic002G162300 Sobic004G285900--Sobic002G162300 Sobic004G285900--Sobic007G154500 Sobic004G285900--Sobic009G189200 Sobic001G205000 Sobic001G205000 Sobic004G285900--Sobic001G205000 Sobic004G355500 Sobic004G355500 Sobic009G088200--Sobic004G355500 Sobic002G280700 Sobic002G280700 Sobic009G088200--Sobic002G280700 Sobic007G152900 Sobic007G152900 Sobic009G088200--Sobic007G152900 Sobic009G088200--Sobic003G396600 Sobic007G079600 Sobic007G079600 Sobic009G088200--Sobic007G079600 Sobic009G088200--Sobic001G078600 Sobic001G103000 Sobic001G103000 Sobic009G088200--Sobic001G103000 Sobic010G032700 Sobic010G032700 Sobic009G088200--Sobic010G032700 Sobic005G047100 Sobic005G047100 Sobic009G088200--Sobic005G047100 Sobic006G278100--Sobic007G150800 Sobic001G107100 Sobic001G107100 Sobic006G278100--Sobic001G107100 Sobic002G128800 Sobic002G128800 Sobic006G278100--Sobic002G128800 Sobic003G250700 Sobic003G250700 Sobic006G278100--Sobic003G250700 Sobic009G232200 Sobic009G232200 Sobic006G278100--Sobic009G232200 Sobic002G338400 Sobic002G338400 Sobic006G278100--Sobic002G338400 Sobic006G278100--Sobic003G122200 Sobic006G278100--Sobic006G191700 Sobic006G278100--Sobic001G261549 Sobic006G191700--Sobic001G261549 Sobic001G107200 Sobic001G107200 Sobic006G191700--Sobic001G107200 Sobic006G191700--Sobic006G278100 Sobic006G191700--Sobic009G189200 Sobic001G528600 Sobic001G528600 Sobic006G191700--Sobic001G528600 Sobic007G094400 Sobic007G094400 Sobic006G191700--Sobic007G094400 Sobic006G191700--Sobic008G096200 Sobic004G331200 Sobic004G331200 Sobic006G191700--Sobic004G331200 Sobic006G191700--Sobic001G078600
Octagon: transcription factors


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