Gene annotation
Transcriptome id Sobic.010G004900.1
Synonym Sb10g000650, EMB2769
Functional annotation CWC15 homolog A, putative, expressed
UniProt C5Z262
Pfam PF04889
Panther DB PTHR12718
NCBI CDD KOG3228; Uncharacterized conserved protein
KEGG Orthology K12863; protein CWC15
Gene Ontology GO:0005681; spliceosomal complex GO:0000398mRNA splicing, via spliceosome


Orthologs (automatic annotation)
TAIR AT3G13200 : Cwf15 / Cwc15 cell cycle control family protein
RAP-DB (Rice) LOC_Os06g01700.1 : CWC15 homolog A, putative, expressed
MaizeGDB (Corn) Zm00025a022887 , Zm00025a035937
Brachypodium KQK20040
Barley HORVU5Hr1G085560.6 , HORVU5Hr1G085560.5 , HORVU5Hr1G085560.4 , HORVU5Hr1G085560.3 , HORVU5Hr1G085560.2 , HORVU5Hr1G085560.1 , HORVU7Hr1G001880.6 , HORVU7Hr1G001880.4 , HORVU7Hr1G001880.5 , HORVU7Hr1G001880.3 , HORVU7Hr1G001880.1
Wheat TraesCS7A02G018200 , TraesCS5A02G341300 , TraesCS5D02G346900 , TraesCS5D02G346900 , TraesCS7D02G015500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
2 Sobic.002G297500 coiled-coil domain-containing protein 111, putative, expressed -
3 Sobic.006G119300 ribonuclease H2 subunit B, putative, expressed K10744: ribonuclease H2 subunit B
4 Sobic.003G201000 WD domain, G-beta repeat domain containing protein, expressed -
5 Sobic.006G102900 expressed protein -
6 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
7 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
8 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
9 Sobic.002G113400 dnaJ domain containing protein, expressed -
10 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
11 Sobic.009G214100 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
12 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
13 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
14 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
15 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
16 Sobic.002G246900 expressed protein -
17 Sobic.002G057500 C-Myc-binding protein, putative, expressed -
18 Sobic.003G444200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
19 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
20 Sobic.001G231200 expressed protein -


Gene co-expression network
sample Sobic010G004900 Sobic010G004900 Sobic009G189200 Sobic009G189200 Sobic010G004900--Sobic009G189200 Sobic002G297500 Sobic002G297500 Sobic010G004900--Sobic002G297500 Sobic006G119300 Sobic006G119300 Sobic010G004900--Sobic006G119300 Sobic003G201000 Sobic003G201000 Sobic010G004900--Sobic003G201000 Sobic006G102900 Sobic006G102900 Sobic010G004900--Sobic006G102900 Sobic005G144600 Sobic005G144600 Sobic010G004900--Sobic005G144600 Sobic010G105400 Sobic010G105400 Sobic010G004900--Sobic010G105400 Sobic001G521100 Sobic001G521100 Sobic010G004900--Sobic001G521100 Sobic002G113400 Sobic002G113400 Sobic010G004900--Sobic002G113400 Sobic009G189200--Sobic006G102900 Sobic001G261549 Sobic001G261549 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic007G044400 Sobic007G044400 Sobic009G189200--Sobic007G044400 Sobic004G285900 Sobic004G285900 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic003G122200 Sobic003G122200 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600 Sobic002G297500--Sobic002G113400 Sobic004G053900 Sobic004G053900 Sobic002G297500--Sobic004G053900 Sobic001G082800 Sobic001G082800 Sobic002G297500--Sobic001G082800 Sobic010G051100 Sobic010G051100 Sobic002G297500--Sobic010G051100 Sobic009G136000 Sobic009G136000 Sobic002G297500--Sobic009G136000 Sobic001G013400 Sobic001G013400 Sobic002G297500--Sobic001G013400 Sobic002G297500--Sobic006G119300 Sobic008G004900 Sobic008G004900 Sobic002G297500--Sobic008G004900 Sobic001G025900 Sobic001G025900 Sobic002G297500--Sobic001G025900 Sobic006G119300--Sobic002G113400 Sobic001G486600 Sobic001G486600 Sobic006G119300--Sobic001G486600 Sobic006G119300--Sobic002G297500 Sobic007G125300 Sobic007G125300 Sobic006G119300--Sobic007G125300 Sobic010G252200 Sobic010G252200 Sobic006G119300--Sobic010G252200 Sobic006G119300--Sobic001G521100 Sobic004G032900 Sobic004G032900 Sobic006G119300--Sobic004G032900 Sobic005G210500 Sobic005G210500 Sobic006G119300--Sobic005G210500 Sobic006G119300--Sobic004G053900 Sobic010G147700 Sobic010G147700 Sobic003G201000--Sobic010G147700 Sobic003G369200 Sobic003G369200 Sobic003G201000--Sobic003G369200 Sobic009G087000 Sobic009G087000 Sobic003G201000--Sobic009G087000 Sobic003G444300 Sobic003G444300 Sobic003G201000--Sobic003G444300 Sobic003G201000--Sobic005G144600 Sobic010G054600 Sobic010G054600 Sobic003G201000--Sobic010G054600 Sobic006G029300 Sobic006G029300 Sobic003G201000--Sobic006G029300 Sobic002G290000 Sobic002G290000 Sobic003G201000--Sobic002G290000 Sobic005G110535 Sobic005G110535 Sobic003G201000--Sobic005G110535 Sobic001G078600 Sobic001G078600 Sobic006G102900--Sobic001G078600 Sobic003G107200 Sobic003G107200 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic006G102900--Sobic001G261549 Sobic007G154500 Sobic007G154500 Sobic006G102900--Sobic007G154500 Sobic002G426800 Sobic002G426800 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic004G047100 Sobic004G047100 Sobic006G102900--Sobic004G047100 Sobic006G102900--Sobic009G189200 Sobic007G168900 Sobic007G168900 Sobic005G144600--Sobic007G168900 Sobic005G144600--Sobic010G105400 Sobic003G294500 Sobic003G294500 Sobic005G144600--Sobic003G294500 Sobic005G000500 Sobic005G000500 Sobic005G144600--Sobic005G000500 Sobic003G314900 Sobic003G314900 Sobic005G144600--Sobic003G314900 Sobic001G177900 Sobic001G177900 Sobic005G144600--Sobic001G177900 Sobic005G144600--Sobic004G047100 Sobic004G271300 Sobic004G271300 Sobic005G144600--Sobic004G271300 Sobic003G179500 Sobic003G179500 Sobic005G144600--Sobic003G179500 Sobic010G105400--Sobic005G144600 Sobic010G105400--Sobic004G047100 Sobic009G184200 Sobic009G184200 Sobic010G105400--Sobic009G184200 Sobic010G105400--Sobic005G000500 Sobic001G398400 Sobic001G398400 Sobic010G105400--Sobic001G398400 Sobic010G105400--Sobic003G179500 Sobic006G124400 Sobic006G124400 Sobic010G105400--Sobic006G124400 Sobic010G105400--Sobic007G168900 Sobic002G204400 Sobic002G204400 Sobic010G105400--Sobic002G204400 Sobic001G521100--Sobic002G113400 Sobic002G246900 Sobic002G246900 Sobic001G521100--Sobic002G246900 Sobic002G351100 Sobic002G351100 Sobic001G521100--Sobic002G351100 Sobic002G315400 Sobic002G315400 Sobic001G521100--Sobic002G315400 Sobic001G521100--Sobic001G025900 Sobic001G521100--Sobic006G119300 Sobic006G236800 Sobic006G236800 Sobic001G521100--Sobic006G236800 Sobic003G442300 Sobic003G442300 Sobic001G521100--Sobic003G442300 Sobic003G297200 Sobic003G297200 Sobic001G521100--Sobic003G297200 Sobic002G113400--Sobic004G053900 Sobic002G113400--Sobic001G025900 Sobic002G113400--Sobic002G297500 Sobic002G113400--Sobic002G290000 Sobic002G113400--Sobic001G013400 Sobic008G148000 Sobic008G148000 Sobic002G113400--Sobic008G148000 Sobic002G113400--Sobic005G110535 Sobic002G113400--Sobic007G125300 Sobic002G113400--Sobic010G051100
Octagon: transcription factors


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