Gene annotation
Transcriptome id Sobic.006G119300.1
Synonym Sb06g020030
Functional annotation ribonuclease H2 subunit B, putative, expressed
UniProt A0A1B6PLL3
Pfam PF09468
Panther DB PTHR13383 PTHR13383:SF11
NCBI CDD KOG4705; Uncharacterized conserved protein
KEGG Orthology K10744; ribonuclease H2 subunit B
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT4G20325 : -
RAP-DB (Rice) LOC_Os04g40050.1 : ribonuclease H2 subunit B, putative, expressed
MaizeGDB (Corn) Zm00025a011007
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G113400 dnaJ domain containing protein, expressed -
2 Sobic.001G486600 RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed K10755: replication factor C subunit 2/4
3 Sobic.002G297500 coiled-coil domain-containing protein 111, putative, expressed -
4 Sobic.007G125300 BRCA1 C Terminus domain containing protein, expressed -
5 Sobic.010G252200 PPR repeat domain containing protein, putative, expressed -
6 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
7 Sobic.004G032900 wee1-like protein kinase, putative, expressed K06632: wee1-like protein kinase
8 Sobic.005G210500 - K10901: BLM, RECQL3, bloom syndrome protein
9 Sobic.004G053900 expressed protein -
10 Sobic.004G069400 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
11 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
12 Sobic.009G081800 helicase, putative, expressed K11273: DDX11, CHL1, chromosome transmission fidelity protein 1
13 Sobic.001G082800 ORC5 - Putative origin recognition complex subunit 5, expressed K02607: origin recognition complex subunit 5
14 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
15 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -
16 Sobic.006G126800 expressed protein K10730: ATP-dependent DNA helicase Q4
17 Sobic.010G038200 CDT1A - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
18 Sobic.006G127200 kelch repeat protein, putative, expressed -
19 Sobic.001G016800 protein binding protein, putative, expressed K11271: DSCC1, sister chromatid cohesion protein DCC1
20 Sobic.007G112100 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I


Gene co-expression network
sample Sobic006G119300 Sobic006G119300 Sobic002G113400 Sobic002G113400 Sobic006G119300--Sobic002G113400 Sobic001G486600 Sobic001G486600 Sobic006G119300--Sobic001G486600 Sobic002G297500 Sobic002G297500 Sobic006G119300--Sobic002G297500 Sobic007G125300 Sobic007G125300 Sobic006G119300--Sobic007G125300 Sobic010G252200 Sobic010G252200 Sobic006G119300--Sobic010G252200 Sobic001G521100 Sobic001G521100 Sobic006G119300--Sobic001G521100 Sobic004G032900 Sobic004G032900 Sobic006G119300--Sobic004G032900 Sobic005G210500 Sobic005G210500 Sobic006G119300--Sobic005G210500 Sobic004G053900 Sobic004G053900 Sobic006G119300--Sobic004G053900 Sobic002G113400--Sobic004G053900 Sobic001G025900 Sobic001G025900 Sobic002G113400--Sobic001G025900 Sobic002G113400--Sobic002G297500 Sobic002G290000 Sobic002G290000 Sobic002G113400--Sobic002G290000 Sobic001G013400 Sobic001G013400 Sobic002G113400--Sobic001G013400 Sobic008G148000 Sobic008G148000 Sobic002G113400--Sobic008G148000 Sobic005G110535 Sobic005G110535 Sobic002G113400--Sobic005G110535 Sobic002G113400--Sobic007G125300 Sobic010G051100 Sobic010G051100 Sobic002G113400--Sobic010G051100 Sobic001G486600--Sobic005G210500 Sobic008G131900 Sobic008G131900 Sobic001G486600--Sobic008G131900 Sobic010G038200 Sobic010G038200 Sobic001G486600--Sobic010G038200 Sobic002G173400 Sobic002G173400 Sobic001G486600--Sobic002G173400 Sobic001G486600--Sobic006G119300 Sobic008G047500 Sobic008G047500 Sobic001G486600--Sobic008G047500 Sobic010G030000 Sobic010G030000 Sobic001G486600--Sobic010G030000 Sobic001G486600--Sobic010G252200 Sobic003G204100 Sobic003G204100 Sobic001G486600--Sobic003G204100 Sobic002G297500--Sobic002G113400 Sobic002G297500--Sobic004G053900 Sobic001G082800 Sobic001G082800 Sobic002G297500--Sobic001G082800 Sobic002G297500--Sobic010G051100 Sobic009G136000 Sobic009G136000 Sobic002G297500--Sobic009G136000 Sobic002G297500--Sobic001G013400 Sobic002G297500--Sobic006G119300 Sobic008G004900 Sobic008G004900 Sobic002G297500--Sobic008G004900 Sobic002G297500--Sobic001G025900 Sobic007G125300--Sobic002G290000 Sobic007G125300--Sobic005G110535 Sobic007G125300--Sobic008G148000 Sobic007G125300--Sobic004G053900 Sobic001G109700 Sobic001G109700 Sobic007G125300--Sobic001G109700 Sobic001G377700 Sobic001G377700 Sobic007G125300--Sobic001G377700 Sobic002G204400 Sobic002G204400 Sobic007G125300--Sobic002G204400 Sobic003G118100 Sobic003G118100 Sobic007G125300--Sobic003G118100 Sobic007G125300--Sobic002G113400 Sobic006G126800 Sobic006G126800 Sobic010G252200--Sobic006G126800 Sobic010G252200--Sobic005G210500 Sobic009G081800 Sobic009G081800 Sobic010G252200--Sobic009G081800 Sobic010G252200--Sobic001G486600 Sobic003G184666 Sobic003G184666 Sobic010G252200--Sobic003G184666 Sobic010G252200--Sobic006G119300 Sobic001G268300 Sobic001G268300 Sobic010G252200--Sobic001G268300 Sobic002G362200 Sobic002G362200 Sobic010G252200--Sobic002G362200 Sobic003G045450 Sobic003G045450 Sobic010G252200--Sobic003G045450 Sobic001G521100--Sobic002G113400 Sobic002G246900 Sobic002G246900 Sobic001G521100--Sobic002G246900 Sobic002G351100 Sobic002G351100 Sobic001G521100--Sobic002G351100 Sobic002G315400 Sobic002G315400 Sobic001G521100--Sobic002G315400 Sobic001G521100--Sobic001G025900 Sobic001G521100--Sobic006G119300 Sobic006G236800 Sobic006G236800 Sobic001G521100--Sobic006G236800 Sobic003G442300 Sobic003G442300 Sobic001G521100--Sobic003G442300 Sobic003G297200 Sobic003G297200 Sobic001G521100--Sobic003G297200 Sobic007G112100 Sobic007G112100 Sobic004G032900--Sobic007G112100 Sobic004G032900--Sobic007G125300 Sobic004G032900--Sobic006G119300 Sobic002G236700 Sobic002G236700 Sobic004G032900--Sobic002G236700 Sobic009G109300 Sobic009G109300 Sobic004G032900--Sobic009G109300 Sobic004G032900--Sobic002G246900 Sobic004G032900--Sobic010G051100 Sobic006G120600 Sobic006G120600 Sobic004G032900--Sobic006G120600 Sobic010G103700 Sobic010G103700 Sobic004G032900--Sobic010G103700 Sobic003G418400 Sobic003G418400 Sobic005G210500--Sobic003G418400 Sobic005G210500--Sobic001G486600 Sobic009G214500 Sobic009G214500 Sobic005G210500--Sobic009G214500 Sobic005G210500--Sobic010G038200 Sobic001G117900 Sobic001G117900 Sobic005G210500--Sobic001G117900 Sobic003G005500 Sobic003G005500 Sobic005G210500--Sobic003G005500 Sobic005G210500--Sobic010G252200 Sobic007G102300 Sobic007G102300 Sobic005G210500--Sobic007G102300 Sobic005G210500--Sobic010G030000 Sobic004G053900--Sobic002G113400 Sobic004G053900--Sobic002G297500 Sobic004G053900--Sobic002G290000 Sobic004G053900--Sobic007G125300 Sobic004G053900--Sobic008G148000 Sobic004G053900--Sobic005G110535 Sobic004G053900--Sobic010G051100 Sobic006G179200 Sobic006G179200 Sobic004G053900--Sobic006G179200 Sobic004G328300 Sobic004G328300 Sobic004G053900--Sobic004G328300
Octagon: transcription factors


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