Gene annotation
Transcriptome id Sobic.002G297500.5,Sobic.002G297500.2,Sobic.002G297500.4,Sobic.002G297500.1
Synonym
Functional annotation coiled-coil domain-containing protein 111, putative, expressed
UniProt A0A1B6QE50 , A0A1W0W6G6 , A0A1B6QE47
Pfam PF03121
Panther DB PTHR31399 PTHR31399:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006260; DNA replication GO:0003896DNA primase activity


Orthologs (automatic annotation)
TAIR AT5G52800 : DNA primases
RAP-DB (Rice) LOC_Os07g28470.1,LOC_Os07g28470.2 : coiled-coil domain-containing protein 111, putative, expressed
MaizeGDB (Corn) Zm00025a047865
Brachypodium KQK16349
Barley HORVU2Hr1G016660.18 , HORVU2Hr1G016660.13 , HORVU2Hr1G016660.12 , HORVU2Hr1G016660.11 , HORVU2Hr1G016660.10 , HORVU2Hr1G016660.17 , HORVU2Hr1G016660.39 , HORVU2Hr1G016660.35 , HORVU2Hr1G016660.34 , HORVU2Hr1G016660.37 , HORVU2Hr1G016660.36 , HORVU2Hr1G016660.31 , HORVU2Hr1G016660.30 , HORVU2Hr1G016660.33 , HORVU2Hr1G016660.32 , HORVU2Hr1G016660.9 , HORVU2Hr1G016660.8 , HORVU2Hr1G016660.2 , HORVU2Hr1G016660.1 , HORVU2Hr1G016660.7 , HORVU2Hr1G016660.6 , HORVU2Hr1G016660.4 , HORVU2Hr1G016660.22 , HORVU2Hr1G016660.20 , HORVU2Hr1G016660.21 , HORVU2Hr1G016660.26 , HORVU2Hr1G016660.27 , HORVU2Hr1G016660.24 , HORVU2Hr1G016660.25 , HORVU2Hr1G016660.28 , HORVU2Hr1G016660.40
Wheat TraesCS2D02G097300 , TraesCS2D02G097300 , TraesCS2A02G097900 , TraesCS2A02G097900 , TraesCS2B02G113600 , TraesCS2B02G113600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G113400 dnaJ domain containing protein, expressed -
2 Sobic.004G053900 expressed protein -
3 Sobic.001G082800 ORC5 - Putative origin recognition complex subunit 5, expressed K02607: origin recognition complex subunit 5
4 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1
5 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
6 Sobic.001G013400 nuf2 family protein, expressed -
7 Sobic.006G119300 ribonuclease H2 subunit B, putative, expressed K10744: ribonuclease H2 subunit B
8 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
9 Sobic.001G025900 expressed protein -
10 Sobic.006G035600 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
11 Sobic.003G118100 EMB3013, putative, expressed K17545: serine/threonine-protein kinase ULK4
12 Sobic.008G148000 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
13 Sobic.006G179200 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
14 Sobic.002G090500 calreticulin precursor protein, putative, expressed K08057: calreticulin
15 Sobic.002G290000 helicase, putative, expressed K15362: BRIP1, BACH1, fanconi anemia group J protein
16 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -
17 Sobic.001G323400 expressed protein -
18 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
19 Sobic.001G016800 protein binding protein, putative, expressed K11271: DSCC1, sister chromatid cohesion protein DCC1
20 Sobic.007G125300 BRCA1 C Terminus domain containing protein, expressed -


Gene co-expression network
sample Sobic002G297500 Sobic002G297500 Sobic002G113400 Sobic002G113400 Sobic002G297500--Sobic002G113400 Sobic004G053900 Sobic004G053900 Sobic002G297500--Sobic004G053900 Sobic001G082800 Sobic001G082800 Sobic002G297500--Sobic001G082800 Sobic010G051100 Sobic010G051100 Sobic002G297500--Sobic010G051100 Sobic009G136000 Sobic009G136000 Sobic002G297500--Sobic009G136000 Sobic001G013400 Sobic001G013400 Sobic002G297500--Sobic001G013400 Sobic006G119300 Sobic006G119300 Sobic002G297500--Sobic006G119300 Sobic008G004900 Sobic008G004900 Sobic002G297500--Sobic008G004900 Sobic001G025900 Sobic001G025900 Sobic002G297500--Sobic001G025900 Sobic002G113400--Sobic004G053900 Sobic002G113400--Sobic001G025900 Sobic002G113400--Sobic002G297500 Sobic002G290000 Sobic002G290000 Sobic002G113400--Sobic002G290000 Sobic002G113400--Sobic001G013400 Sobic008G148000 Sobic008G148000 Sobic002G113400--Sobic008G148000 Sobic005G110535 Sobic005G110535 Sobic002G113400--Sobic005G110535 Sobic007G125300 Sobic007G125300 Sobic002G113400--Sobic007G125300 Sobic002G113400--Sobic010G051100 Sobic004G053900--Sobic002G113400 Sobic004G053900--Sobic002G297500 Sobic004G053900--Sobic002G290000 Sobic004G053900--Sobic007G125300 Sobic004G053900--Sobic008G148000 Sobic004G053900--Sobic005G110535 Sobic004G053900--Sobic010G051100 Sobic006G179200 Sobic006G179200 Sobic004G053900--Sobic006G179200 Sobic004G328300 Sobic004G328300 Sobic004G053900--Sobic004G328300 Sobic001G082800--Sobic009G136000 Sobic002G390800 Sobic002G390800 Sobic001G082800--Sobic002G390800 Sobic009G125800 Sobic009G125800 Sobic001G082800--Sobic009G125800 Sobic001G082800--Sobic008G004900 Sobic001G082800--Sobic002G297500 Sobic009G131200 Sobic009G131200 Sobic001G082800--Sobic009G131200 Sobic001G082800--Sobic002G113400 Sobic001G082800--Sobic004G053900 Sobic009G058100 Sobic009G058100 Sobic001G082800--Sobic009G058100 Sobic009G181500 Sobic009G181500 Sobic010G051100--Sobic009G181500 Sobic002G191000 Sobic002G191000 Sobic010G051100--Sobic002G191000 Sobic006G035600 Sobic006G035600 Sobic010G051100--Sobic006G035600 Sobic010G051100--Sobic004G053900 Sobic003G118100 Sobic003G118100 Sobic010G051100--Sobic003G118100 Sobic010G051100--Sobic002G113400 Sobic003G179500 Sobic003G179500 Sobic010G051100--Sobic003G179500 Sobic002G246900 Sobic002G246900 Sobic010G051100--Sobic002G246900 Sobic010G191000 Sobic010G191000 Sobic010G051100--Sobic010G191000 Sobic010G038200 Sobic010G038200 Sobic009G136000--Sobic010G038200 Sobic009G136000--Sobic001G082800 Sobic009G136000--Sobic009G125800 Sobic008G131900 Sobic008G131900 Sobic009G136000--Sobic008G131900 Sobic010G030000 Sobic010G030000 Sobic009G136000--Sobic010G030000 Sobic006G193100 Sobic006G193100 Sobic009G136000--Sobic006G193100 Sobic009G136000--Sobic002G390800 Sobic009G136000--Sobic009G131200 Sobic002G052800 Sobic002G052800 Sobic009G136000--Sobic002G052800 Sobic001G013400--Sobic001G025900 Sobic007G007800 Sobic007G007800 Sobic001G013400--Sobic007G007800 Sobic001G013400--Sobic002G290000 Sobic001G013400--Sobic002G113400 Sobic008G129200 Sobic008G129200 Sobic001G013400--Sobic008G129200 Sobic001G142000 Sobic001G142000 Sobic001G013400--Sobic001G142000 Sobic001G013400--Sobic005G110535 Sobic001G083300 Sobic001G083300 Sobic001G013400--Sobic001G083300 Sobic004G331600 Sobic004G331600 Sobic001G013400--Sobic004G331600 Sobic006G119300--Sobic002G113400 Sobic001G486600 Sobic001G486600 Sobic006G119300--Sobic001G486600 Sobic006G119300--Sobic002G297500 Sobic006G119300--Sobic007G125300 Sobic010G252200 Sobic010G252200 Sobic006G119300--Sobic010G252200 Sobic001G521100 Sobic001G521100 Sobic006G119300--Sobic001G521100 Sobic004G032900 Sobic004G032900 Sobic006G119300--Sobic004G032900 Sobic005G210500 Sobic005G210500 Sobic006G119300--Sobic005G210500 Sobic006G119300--Sobic004G053900 Sobic001G248400 Sobic001G248400 Sobic008G004900--Sobic001G248400 Sobic008G004900--Sobic001G082800 Sobic008G004900--Sobic009G131200 Sobic008G004900--Sobic002G390800 Sobic008G004900--Sobic010G038200 Sobic002G308000 Sobic002G308000 Sobic008G004900--Sobic002G308000 Sobic002G271400 Sobic002G271400 Sobic008G004900--Sobic002G271400 Sobic008G004900--Sobic002G113400 Sobic008G004900--Sobic009G136000 Sobic001G025900--Sobic001G013400 Sobic001G025900--Sobic002G113400 Sobic001G025900--Sobic002G290000 Sobic001G025900--Sobic002G271400 Sobic001G025900--Sobic005G110535 Sobic004G321400 Sobic004G321400 Sobic001G025900--Sobic004G321400 Sobic001G025900--Sobic004G053900 Sobic001G025900--Sobic004G328300 Sobic006G236800 Sobic006G236800 Sobic001G025900--Sobic006G236800
Octagon: transcription factors


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