Gene annotation
Transcriptome id Sobic.010G265900.1
Synonym Sb10g030120, ATNPSN11, NSPN11, NPSN11
Functional annotation novel plant SNARE 11, putative, expressed
UniProt C5Z1V3
Pfam PF03908
Panther DB PTHR21230 PTHR21230:SF27
NCBI CDD KOG1666; V-SNARE
KEGG Orthology K08494; novel plant SNARE
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35190 : novel plant snare 11
RAP-DB (Rice) LOC_Os06g50120.1 : novel plant SNARE 11, putative, expressed
MaizeGDB (Corn) Zm00025a041721
Brachypodium KQK17544
Barley HORVU7Hr1G091500.4 , HORVU7Hr1G091500.5 , HORVU7Hr1G091500.2 , HORVU7Hr1G091500.3 , HORVU7Hr1G091500.1
Wheat TraesCS7D02G382100 , TraesCS7A02G385500 , TraesCS7B02G288400
Populus -


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cDNA sequences
Sobic.010G265900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G200000 RNA recognition motif, putative, expressed -
2 Sobic.005G120500 expressed protein -
3 Sobic.006G102900 expressed protein -
4 Sobic.005G080900 expressed protein -
5 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
6 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
7 Sobic.006G120700 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed K03434: N-acetylglucosaminylphosphatidylinositol deacetylase
8 Sobic.001G157800 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
9 Sobic.004G344500 tubulin-specific chaperone A, putative, expressed K17292: tubulin-specific chaperone A
10 Sobic.002G092200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
11 Sobic.007G044400 MSP domain containing protein, expressed -
12 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
13 Sobic.002G057500 C-Myc-binding protein, putative, expressed -
14 Sobic.007G129000 nucleobase-ascorbate transporter, putative, expressed -
15 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
16 Sobic.003G396600 down-regulated TF in developmental senescence(PubMedID : 27586543)@ZOS5-12 - C2H2 zinc finger protein, expressed -
17 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
18 Sobic.006G083000 CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
19 Sobic.006G260300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@oryzain beta chain precursor, putative, expressed -
20 Sobic.004G217450 - -


Gene co-expression network
sample Sobic010G265900 Sobic010G265900 Sobic006G200000 Sobic006G200000 Sobic010G265900--Sobic006G200000 Sobic005G120500 Sobic005G120500 Sobic010G265900--Sobic005G120500 Sobic006G102900 Sobic006G102900 Sobic010G265900--Sobic006G102900 Sobic005G080900 Sobic005G080900 Sobic010G265900--Sobic005G080900 Sobic003G084300 Sobic003G084300 Sobic010G265900--Sobic003G084300 Sobic009G189200 Sobic009G189200 Sobic010G265900--Sobic009G189200 Sobic006G120700 Sobic006G120700 Sobic010G265900--Sobic006G120700 Sobic001G157800 Sobic001G157800 Sobic010G265900--Sobic001G157800 Sobic004G344500 Sobic004G344500 Sobic010G265900--Sobic004G344500 Sobic006G200000--Sobic006G120700 Sobic006G200000--Sobic005G080900 Sobic003G396600 Sobic003G396600 Sobic006G200000--Sobic003G396600 Sobic006G200000--Sobic010G265900 Sobic003G034600 Sobic003G034600 Sobic006G200000--Sobic003G034600 Sobic010G115200 Sobic010G115200 Sobic006G200000--Sobic010G115200 Sobic006G083000 Sobic006G083000 Sobic006G200000--Sobic006G083000 Sobic003G300900 Sobic003G300900 Sobic006G200000--Sobic003G300900 Sobic001G410200 Sobic001G410200 Sobic006G200000--Sobic001G410200 Sobic005G120500--Sobic005G080900 Sobic005G120500--Sobic010G265900 Sobic009G216800 Sobic009G216800 Sobic005G120500--Sobic009G216800 Sobic008G102800 Sobic008G102800 Sobic005G120500--Sobic008G102800 Sobic007G150800 Sobic007G150800 Sobic005G120500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic005G120500--Sobic009G173500 Sobic003G122200 Sobic003G122200 Sobic005G120500--Sobic003G122200 Sobic001G347901 Sobic001G347901 Sobic005G120500--Sobic001G347901 Sobic005G120500--Sobic001G157800 Sobic001G078600 Sobic001G078600 Sobic006G102900--Sobic001G078600 Sobic003G107200 Sobic003G107200 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic001G261549 Sobic001G261549 Sobic006G102900--Sobic001G261549 Sobic007G154500 Sobic007G154500 Sobic006G102900--Sobic007G154500 Sobic002G426800 Sobic002G426800 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic004G047100 Sobic004G047100 Sobic006G102900--Sobic004G047100 Sobic006G102900--Sobic009G189200 Sobic003G436700 Sobic003G436700 Sobic005G080900--Sobic003G436700 Sobic003G109600 Sobic003G109600 Sobic005G080900--Sobic003G109600 Sobic004G252100 Sobic004G252100 Sobic005G080900--Sobic004G252100 Sobic002G379500 Sobic002G379500 Sobic005G080900--Sobic002G379500 Sobic006G067800 Sobic006G067800 Sobic005G080900--Sobic006G067800 Sobic009G101700 Sobic009G101700 Sobic005G080900--Sobic009G101700 Sobic006G261900 Sobic006G261900 Sobic005G080900--Sobic006G261900 Sobic001G016500 Sobic001G016500 Sobic005G080900--Sobic001G016500 Sobic002G286900 Sobic002G286900 Sobic005G080900--Sobic002G286900 Sobic003G084300--Sobic001G157800 Sobic009G165500 Sobic009G165500 Sobic003G084300--Sobic009G165500 Sobic003G084300--Sobic009G189200 Sobic003G011100 Sobic003G011100 Sobic003G084300--Sobic003G011100 Sobic002G385400 Sobic002G385400 Sobic003G084300--Sobic002G385400 Sobic003G084300--Sobic010G265900 Sobic002G258300 Sobic002G258300 Sobic003G084300--Sobic002G258300 Sobic003G084300--Sobic006G200000 Sobic003G084300--Sobic006G102900 Sobic009G189200--Sobic006G102900 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic007G044400 Sobic007G044400 Sobic009G189200--Sobic007G044400 Sobic004G285900 Sobic004G285900 Sobic009G189200--Sobic004G285900 Sobic009G189200--Sobic003G084300 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600 Sobic006G120700--Sobic006G200000 Sobic001G068700 Sobic001G068700 Sobic006G120700--Sobic001G068700 Sobic002G101000 Sobic002G101000 Sobic006G120700--Sobic002G101000 Sobic006G120700--Sobic003G396600 Sobic006G120700--Sobic010G144900 Sobic006G120700--Sobic010G265900 Sobic002G236700 Sobic002G236700 Sobic006G120700--Sobic002G236700 Sobic006G120700--Sobic007G044400 Sobic006G120700--Sobic006G102900 Sobic001G157800--Sobic003G084300 Sobic001G157800--Sobic006G200000 Sobic001G157800--Sobic003G396600 Sobic001G157800--Sobic002G385400 Sobic003G096000 Sobic003G096000 Sobic001G157800--Sobic003G096000 Sobic003G294100 Sobic003G294100 Sobic001G157800--Sobic003G294100 Sobic001G157800--Sobic010G265900 Sobic002G361700 Sobic002G361700 Sobic001G157800--Sobic002G361700 Sobic001G157800--Sobic007G044400 Sobic001G418100 Sobic001G418100 Sobic004G344500--Sobic001G418100 Sobic004G344500--Sobic003G122200 Sobic002G128800 Sobic002G128800 Sobic004G344500--Sobic002G128800 Sobic004G344500--Sobic006G200000 Sobic003G443300 Sobic003G443300 Sobic004G344500--Sobic003G443300 Sobic004G344500--Sobic003G096000 Sobic003G219800 Sobic003G219800 Sobic004G344500--Sobic003G219800 Sobic001G304400 Sobic001G304400 Sobic004G344500--Sobic001G304400 Sobic004G344500--Sobic001G347901
Octagon: transcription factors


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