Gene annotation
Transcriptome id Sobic.005G120500.1
Synonym Sb05g017500
Functional annotation expressed protein
UniProt C5Y2L4
Pfam PF11820
Panther DB PTHR33128
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63500 : Protein of unknown function (DUF 3339)
RAP-DB (Rice) LOC_Os11g30360.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ88497
Barley HORVU3Hr1G014960.1
Wheat -
Populus -


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cDNA sequences
Sobic.005G120500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G080900 expressed protein -
2 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
3 Sobic.009G216800 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
4 Sobic.008G102800 expressed protein -
5 Sobic.007G150800 expressed protein -
6 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
7 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
8 Sobic.001G347901 - -
9 Sobic.001G157800 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
10 Sobic.010G070500 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
11 Sobic.004G239500 RING-H2 finger protein ATL1Q, putative, expressed -
12 Sobic.004G055700 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
13 Sobic.007G161700 expressed protein K17769: mitochondrial import receptor subunit TOM22
14 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
15 Sobic.002G179300 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
16 Sobic.002G063400 ADP-ribosylation factor, putative, expressed K07943: ADP-ribosylation factor-like protein 2
17 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
18 Sobic.008G186600 ergosterol biosynthetic protein 28, putative, expressed -
19 Sobic.001G508900 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
20 Sobic.003G436700 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e


Gene co-expression network
sample Sobic005G120500 Sobic005G120500 Sobic005G080900 Sobic005G080900 Sobic005G120500--Sobic005G080900 Sobic010G265900 Sobic010G265900 Sobic005G120500--Sobic010G265900 Sobic009G216800 Sobic009G216800 Sobic005G120500--Sobic009G216800 Sobic008G102800 Sobic008G102800 Sobic005G120500--Sobic008G102800 Sobic007G150800 Sobic007G150800 Sobic005G120500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic005G120500--Sobic009G173500 Sobic003G122200 Sobic003G122200 Sobic005G120500--Sobic003G122200 Sobic001G347901 Sobic001G347901 Sobic005G120500--Sobic001G347901 Sobic001G157800 Sobic001G157800 Sobic005G120500--Sobic001G157800 Sobic003G436700 Sobic003G436700 Sobic005G080900--Sobic003G436700 Sobic003G109600 Sobic003G109600 Sobic005G080900--Sobic003G109600 Sobic004G252100 Sobic004G252100 Sobic005G080900--Sobic004G252100 Sobic002G379500 Sobic002G379500 Sobic005G080900--Sobic002G379500 Sobic006G067800 Sobic006G067800 Sobic005G080900--Sobic006G067800 Sobic009G101700 Sobic009G101700 Sobic005G080900--Sobic009G101700 Sobic006G261900 Sobic006G261900 Sobic005G080900--Sobic006G261900 Sobic001G016500 Sobic001G016500 Sobic005G080900--Sobic001G016500 Sobic002G286900 Sobic002G286900 Sobic005G080900--Sobic002G286900 Sobic006G200000 Sobic006G200000 Sobic010G265900--Sobic006G200000 Sobic010G265900--Sobic005G120500 Sobic006G102900 Sobic006G102900 Sobic010G265900--Sobic006G102900 Sobic010G265900--Sobic005G080900 Sobic003G084300 Sobic003G084300 Sobic010G265900--Sobic003G084300 Sobic009G189200 Sobic009G189200 Sobic010G265900--Sobic009G189200 Sobic006G120700 Sobic006G120700 Sobic010G265900--Sobic006G120700 Sobic010G265900--Sobic001G157800 Sobic004G344500 Sobic004G344500 Sobic010G265900--Sobic004G344500 Sobic002G372400 Sobic002G372400 Sobic009G216800--Sobic002G372400 Sobic002G348100 Sobic002G348100 Sobic009G216800--Sobic002G348100 Sobic003G078200 Sobic003G078200 Sobic009G216800--Sobic003G078200 Sobic002G251900 Sobic002G251900 Sobic009G216800--Sobic002G251900 Sobic008G186600 Sobic008G186600 Sobic009G216800--Sobic008G186600 Sobic004G055700 Sobic004G055700 Sobic009G216800--Sobic004G055700 Sobic006G136800 Sobic006G136800 Sobic009G216800--Sobic006G136800 Sobic001G403500 Sobic001G403500 Sobic009G216800--Sobic001G403500 Sobic009G216800--Sobic003G109600 Sobic006G256900 Sobic006G256900 Sobic008G102800--Sobic006G256900 Sobic003G236600 Sobic003G236600 Sobic008G102800--Sobic003G236600 Sobic002G001700 Sobic002G001700 Sobic008G102800--Sobic002G001700 Sobic001G430100 Sobic001G430100 Sobic008G102800--Sobic001G430100 Sobic009G221500 Sobic009G221500 Sobic008G102800--Sobic009G221500 Sobic006G197100 Sobic006G197100 Sobic008G102800--Sobic006G197100 Sobic010G138300 Sobic010G138300 Sobic008G102800--Sobic010G138300 Sobic009G199001 Sobic009G199001 Sobic008G102800--Sobic009G199001 Sobic001G264000 Sobic001G264000 Sobic008G102800--Sobic001G264000 Sobic001G475500 Sobic001G475500 Sobic007G150800--Sobic001G475500 Sobic002G128800 Sobic002G128800 Sobic007G150800--Sobic002G128800 Sobic010G070500 Sobic010G070500 Sobic007G150800--Sobic010G070500 Sobic006G278100 Sobic006G278100 Sobic007G150800--Sobic006G278100 Sobic009G212200 Sobic009G212200 Sobic007G150800--Sobic009G212200 Sobic001G444800 Sobic001G444800 Sobic007G150800--Sobic001G444800 Sobic007G150800--Sobic003G122200 Sobic007G150800--Sobic009G173500 Sobic003G011100 Sobic003G011100 Sobic007G150800--Sobic003G011100 Sobic001G039400 Sobic001G039400 Sobic009G173500--Sobic001G039400 Sobic001G226500 Sobic001G226500 Sobic009G173500--Sobic001G226500 Sobic009G233400 Sobic009G233400 Sobic009G173500--Sobic009G233400 Sobic009G223300 Sobic009G223300 Sobic009G173500--Sobic009G223300 Sobic009G173500--Sobic003G109600 Sobic009G173500--Sobic003G078200 Sobic003G249700 Sobic003G249700 Sobic009G173500--Sobic003G249700 Sobic009G179100 Sobic009G179100 Sobic009G173500--Sobic009G179100 Sobic009G173500--Sobic010G070500 Sobic003G122200--Sobic001G475500 Sobic001G418100 Sobic001G418100 Sobic003G122200--Sobic001G418100 Sobic003G122200--Sobic007G150800 Sobic005G112800 Sobic005G112800 Sobic003G122200--Sobic005G112800 Sobic003G034600 Sobic003G034600 Sobic003G122200--Sobic003G034600 Sobic010G264300 Sobic010G264300 Sobic003G122200--Sobic010G264300 Sobic001G038300 Sobic001G038300 Sobic003G122200--Sobic001G038300 Sobic003G122200--Sobic004G055700 Sobic001G040100 Sobic001G040100 Sobic003G122200--Sobic001G040100 Sobic004G342400 Sobic004G342400 Sobic001G347901--Sobic004G342400 Sobic002G308300 Sobic002G308300 Sobic001G347901--Sobic002G308300 Sobic009G016500 Sobic009G016500 Sobic001G347901--Sobic009G016500 Sobic001G347901--Sobic009G179100 Sobic001G370700 Sobic001G370700 Sobic001G347901--Sobic001G370700 Sobic001G347901--Sobic009G233400 Sobic002G415500 Sobic002G415500 Sobic001G347901--Sobic002G415500 Sobic001G347901--Sobic009G173500 Sobic001G334300 Sobic001G334300 Sobic001G347901--Sobic001G334300 Sobic001G157800--Sobic003G084300 Sobic001G157800--Sobic006G200000 Sobic003G396600 Sobic003G396600 Sobic001G157800--Sobic003G396600 Sobic002G385400 Sobic002G385400 Sobic001G157800--Sobic002G385400 Sobic003G096000 Sobic003G096000 Sobic001G157800--Sobic003G096000 Sobic003G294100 Sobic003G294100 Sobic001G157800--Sobic003G294100 Sobic001G157800--Sobic010G265900 Sobic002G361700 Sobic002G361700 Sobic001G157800--Sobic002G361700 Sobic007G044400 Sobic007G044400 Sobic001G157800--Sobic007G044400
Octagon: transcription factors


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