Gene annotation
Transcriptome id Sobic.002G179300.1
Synonym Sb02g022800
Functional annotation 60S ribosomal protein L35a-3, putative, expressed
UniProt C5XAM5
Pfam PF01247
Panther DB PTHR10902
NCBI CDD KOG0887; 60S ribosomal protein L35A/L37
KEGG Orthology K02917; RP-L35Ae, large subunit ribosomal protein L35Ae
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT1G74270 : Ribosomal protein L35Ae family protein
RAP-DB (Rice) LOC_Os02g54470.2 : 60S ribosomal protein L35a-3, putative, expressed
MaizeGDB (Corn) Zm00025a046637 , Zm00025a049712 , Zm00025a013804 , Zm00025a032995
Brachypodium KQK02072 , KQK02071 , KQJ88272 , KQK19187 , KQK04982
Barley HORVU2Hr1G002350.1 , HORVU1Hr1G084690.6 , HORVU1Hr1G084690.7 , HORVU1Hr1G084690.4 , HORVU1Hr1G084690.5 , HORVU1Hr1G084690.2 , HORVU1Hr1G084690.3 , HORVU1Hr1G084690.1 , HORVU6Hr1G083120.2 , HORVU6Hr1G083120.3 , HORVU6Hr1G083120.1 , HORVU1Hr1G084690.8 , HORVU5Hr1G039490.1 , HORVU7Hr1G031850.6 , HORVU7Hr1G031850.4 , HORVU7Hr1G031850.5 , HORVU7Hr1G031850.2 , HORVU7Hr1G031850.3 , HORVU7Hr1G031850.1 , HORVU7Hr1G088410.1 , HORVU3Hr1G001560.1 , HORVU5Hr1G015230.2 , HORVU5Hr1G015230.1
Wheat TraesCS3B02G400700 , TraesCS4A02G283800 , TraesCS7B02G060000 , TraesCS1B02G409800 , TraesCS7B02G060000 , TraesCSU02G081000 , TraesCS1A02G383500 , TraesCS7A02G155900 , TraesCS7D02G156300 , TraesCS1D02G391600 , TraesCS6D02G326700 , TraesCS6B02G376800
Populus -


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cDNA sequences
Sobic.002G179300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G070500 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
2 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
3 Sobic.002G286900 ribosomal protein L14, putative, expressed K02875: RP-L14e, large subunit ribosomal protein L14e
4 Sobic.008G108601 - K02980: RP-S29e, small subunit ribosomal protein S29e
5 Sobic.007G178600 - K02966: RP-S19e, small subunit ribosomal protein S19e
6 Sobic.006G057200 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
7 Sobic.003G387900 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
8 Sobic.001G510800 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
9 Sobic.001G334300 - K02966: RP-S19e, small subunit ribosomal protein S19e
10 Sobic.009G227400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
11 Sobic.007G019400 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
12 Sobic.002G255300 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
13 Sobic.010G023900 S10/S20 domain containing ribosomal protein, putative, expressed K02969: RP-S20e, small subunit ribosomal protein S20e
14 Sobic.003G249700 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
15 Sobic.010G060500 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae
16 Sobic.002G049300 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
17 Sobic.003G436700 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e
18 Sobic.001G226500 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
19 Sobic.001G508900 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
20 Sobic.006G137100 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae


Gene co-expression network
sample Sobic002G179300 Sobic002G179300 Sobic010G070500 Sobic010G070500 Sobic002G179300--Sobic010G070500 Sobic004G008400 Sobic004G008400 Sobic002G179300--Sobic004G008400 Sobic002G286900 Sobic002G286900 Sobic002G179300--Sobic002G286900 Sobic008G108601 Sobic008G108601 Sobic002G179300--Sobic008G108601 Sobic007G178600 Sobic007G178600 Sobic002G179300--Sobic007G178600 Sobic006G057200 Sobic006G057200 Sobic002G179300--Sobic006G057200 Sobic003G387900 Sobic003G387900 Sobic002G179300--Sobic003G387900 Sobic001G510800 Sobic001G510800 Sobic002G179300--Sobic001G510800 Sobic001G334300 Sobic001G334300 Sobic002G179300--Sobic001G334300 Sobic001G226500 Sobic001G226500 Sobic010G070500--Sobic001G226500 Sobic010G070500--Sobic004G008400 Sobic010G070500--Sobic008G108601 Sobic010G251600 Sobic010G251600 Sobic010G070500--Sobic010G251600 Sobic004G055100 Sobic004G055100 Sobic010G070500--Sobic004G055100 Sobic010G070500--Sobic002G179300 Sobic010G070500--Sobic002G286900 Sobic003G078200 Sobic003G078200 Sobic010G070500--Sobic003G078200 Sobic003G249700 Sobic003G249700 Sobic010G070500--Sobic003G249700 Sobic009G050300 Sobic009G050300 Sobic004G008400--Sobic009G050300 Sobic004G008400--Sobic007G178600 Sobic003G346600 Sobic003G346600 Sobic004G008400--Sobic003G346600 Sobic006G116700 Sobic006G116700 Sobic004G008400--Sobic006G116700 Sobic002G255300 Sobic002G255300 Sobic004G008400--Sobic002G255300 Sobic007G197800 Sobic007G197800 Sobic004G008400--Sobic007G197800 Sobic003G436700 Sobic003G436700 Sobic004G008400--Sobic003G436700 Sobic006G137100 Sobic006G137100 Sobic004G008400--Sobic006G137100 Sobic002G379500 Sobic002G379500 Sobic004G008400--Sobic002G379500 Sobic002G286900--Sobic006G137100 Sobic002G286900--Sobic008G108601 Sobic002G286900--Sobic004G008400 Sobic002G286900--Sobic009G050300 Sobic002G286900--Sobic001G226500 Sobic001G403500 Sobic001G403500 Sobic002G286900--Sobic001G403500 Sobic002G286900--Sobic003G249700 Sobic005G110800 Sobic005G110800 Sobic002G286900--Sobic005G110800 Sobic002G286900--Sobic007G178600 Sobic008G108601--Sobic007G178600 Sobic008G108601--Sobic004G008400 Sobic008G108601--Sobic002G286900 Sobic008G108601--Sobic003G249700 Sobic002G047600 Sobic002G047600 Sobic008G108601--Sobic002G047600 Sobic007G019400 Sobic007G019400 Sobic008G108601--Sobic007G019400 Sobic010G206200 Sobic010G206200 Sobic008G108601--Sobic010G206200 Sobic002G049300 Sobic002G049300 Sobic008G108601--Sobic002G049300 Sobic008G108601--Sobic001G226500 Sobic007G178600--Sobic004G008400 Sobic007G019000 Sobic007G019000 Sobic007G178600--Sobic007G019000 Sobic007G178600--Sobic003G346600 Sobic007G178600--Sobic009G050300 Sobic007G178600--Sobic008G108601 Sobic006G221200 Sobic006G221200 Sobic007G178600--Sobic006G221200 Sobic009G163800 Sobic009G163800 Sobic007G178600--Sobic009G163800 Sobic007G178600--Sobic003G249700 Sobic007G178600--Sobic002G047600 Sobic006G057200--Sobic002G179300 Sobic006G057200--Sobic007G178600 Sobic010G069400 Sobic010G069400 Sobic006G057200--Sobic010G069400 Sobic006G057200--Sobic004G008400 Sobic004G244800 Sobic004G244800 Sobic006G057200--Sobic004G244800 Sobic006G057200--Sobic010G070500 Sobic001G508900 Sobic001G508900 Sobic006G057200--Sobic001G508900 Sobic006G057200--Sobic002G286900 Sobic006G057200--Sobic003G078200 Sobic003G387900--Sobic006G137100 Sobic006G213000 Sobic006G213000 Sobic003G387900--Sobic006G213000 Sobic003G387900--Sobic002G379500 Sobic003G387900--Sobic007G019400 Sobic009G076400 Sobic009G076400 Sobic003G387900--Sobic009G076400 Sobic003G387900--Sobic003G249700 Sobic003G387900--Sobic002G047600 Sobic003G387900--Sobic010G069400 Sobic002G056200 Sobic002G056200 Sobic003G387900--Sobic002G056200 Sobic010G005300 Sobic010G005300 Sobic001G510800--Sobic010G005300 Sobic001G510800--Sobic002G179300 Sobic001G058900 Sobic001G058900 Sobic001G510800--Sobic001G058900 Sobic008G100000 Sobic008G100000 Sobic001G510800--Sobic008G100000 Sobic001G510800--Sobic008G108601 Sobic001G225700 Sobic001G225700 Sobic001G510800--Sobic001G225700 Sobic002G415500 Sobic002G415500 Sobic001G510800--Sobic002G415500 Sobic001G510800--Sobic006G057200 Sobic009G227400 Sobic009G227400 Sobic001G510800--Sobic009G227400 Sobic009G233400 Sobic009G233400 Sobic001G334300--Sobic009G233400 Sobic002G304900 Sobic002G304900 Sobic001G334300--Sobic002G304900 Sobic001G334300--Sobic003G387900 Sobic009G144300 Sobic009G144300 Sobic001G334300--Sobic009G144300 Sobic001G085400 Sobic001G085400 Sobic001G334300--Sobic001G085400 Sobic009G179100 Sobic009G179100 Sobic001G334300--Sobic009G179100 Sobic001G334300--Sobic009G227400 Sobic005G050500 Sobic005G050500 Sobic001G334300--Sobic005G050500 Sobic001G334300--Sobic002G049300
Octagon: transcription factors


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