Gene annotation
Transcriptome id Sobic.002G255300.1
Synonym Sb02g029050
Functional annotation 60S ribosomal protein L32, putative, expressed
UniProt C5X4M7
Pfam PF01655
Panther DB PTHR23413
NCBI CDD KOG0878; 60S ribosomal protein L32
KEGG Orthology K02912; RP-L32e, large subunit ribosomal protein L32e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT4G18100 : Ribosomal protein L32e
RAP-DB (Rice) LOC_Os08g41300.1 : 60S ribosomal protein L32, putative, expressed
MaizeGDB (Corn) Zm00025a014273 , Zm00025a047543 , Zm00025a047545 , Zm00025a005205 , Zm00025a030376
Brachypodium KQJ99073 , KQJ99064 , KQJ99065 , KQJ90888
Barley HORVU5Hr1G075420.3 , HORVU5Hr1G075420.2
Wheat TraesCS7A02G256300 , TraesCS7D02G257100 , TraesCS5A02G279100 , TraesCS7B02G152900 , TraesCS5D02G286200
Populus -


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cDNA sequences
Sobic.002G255300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
2 Sobic.009G163800 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
3 Sobic.003G346600 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
4 Sobic.009G076400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
5 Sobic.007G178600 - K02966: RP-S19e, small subunit ribosomal protein S19e
6 Sobic.004G331400 60S ribosomal protein L39, putative, expressed K02924: RP-L39e, large subunit ribosomal protein L39e
7 Sobic.010G060500 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae
8 Sobic.007G197800 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
9 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
10 Sobic.009G166500 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
11 Sobic.007G138700 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e
12 Sobic.006G116700 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
13 Sobic.006G260400 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
14 Sobic.006G137100 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae
15 Sobic.004G104100 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
16 Sobic.003G408100 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
17 Sobic.006G213000 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
18 Sobic.002G175100 60S ribosomal protein L44, putative, expressed K02929: RP-L44e, large subunit ribosomal protein L44e
19 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e
20 Sobic.007G019400 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e


Gene co-expression network
sample Sobic002G255300 Sobic002G255300 Sobic004G008400 Sobic004G008400 Sobic002G255300--Sobic004G008400 Sobic009G163800 Sobic009G163800 Sobic002G255300--Sobic009G163800 Sobic003G346600 Sobic003G346600 Sobic002G255300--Sobic003G346600 Sobic009G076400 Sobic009G076400 Sobic002G255300--Sobic009G076400 Sobic007G178600 Sobic007G178600 Sobic002G255300--Sobic007G178600 Sobic004G331400 Sobic004G331400 Sobic002G255300--Sobic004G331400 Sobic010G060500 Sobic010G060500 Sobic002G255300--Sobic010G060500 Sobic007G197800 Sobic007G197800 Sobic002G255300--Sobic007G197800 Sobic009G050300 Sobic009G050300 Sobic002G255300--Sobic009G050300 Sobic004G008400--Sobic009G050300 Sobic004G008400--Sobic007G178600 Sobic004G008400--Sobic003G346600 Sobic006G116700 Sobic006G116700 Sobic004G008400--Sobic006G116700 Sobic004G008400--Sobic002G255300 Sobic004G008400--Sobic007G197800 Sobic003G436700 Sobic003G436700 Sobic004G008400--Sobic003G436700 Sobic006G137100 Sobic006G137100 Sobic004G008400--Sobic006G137100 Sobic002G379500 Sobic002G379500 Sobic004G008400--Sobic002G379500 Sobic009G166500 Sobic009G166500 Sobic009G163800--Sobic009G166500 Sobic009G163800--Sobic009G050300 Sobic009G163800--Sobic003G346600 Sobic007G138700 Sobic007G138700 Sobic009G163800--Sobic007G138700 Sobic006G047400 Sobic006G047400 Sobic009G163800--Sobic006G047400 Sobic003G408100 Sobic003G408100 Sobic009G163800--Sobic003G408100 Sobic009G163800--Sobic004G331400 Sobic002G081600 Sobic002G081600 Sobic009G163800--Sobic002G081600 Sobic001G091801 Sobic001G091801 Sobic009G163800--Sobic001G091801 Sobic003G346600--Sobic010G060500 Sobic003G346600--Sobic009G050300 Sobic003G346600--Sobic002G081600 Sobic003G346600--Sobic009G166500 Sobic003G346600--Sobic004G008400 Sobic003G346600--Sobic009G163800 Sobic003G346600--Sobic007G178600 Sobic003G346600--Sobic006G116700 Sobic003G346600--Sobic006G137100 Sobic006G213000 Sobic006G213000 Sobic009G076400--Sobic006G213000 Sobic007G019400 Sobic007G019400 Sobic009G076400--Sobic007G019400 Sobic003G387900 Sobic003G387900 Sobic009G076400--Sobic003G387900 Sobic007G053300 Sobic007G053300 Sobic009G076400--Sobic007G053300 Sobic009G076400--Sobic006G137100 Sobic001G226500 Sobic001G226500 Sobic009G076400--Sobic001G226500 Sobic009G076400--Sobic002G255300 Sobic003G249700 Sobic003G249700 Sobic009G076400--Sobic003G249700 Sobic009G076400--Sobic004G008400 Sobic007G178600--Sobic004G008400 Sobic007G019000 Sobic007G019000 Sobic007G178600--Sobic007G019000 Sobic007G178600--Sobic003G346600 Sobic007G178600--Sobic009G050300 Sobic008G108601 Sobic008G108601 Sobic007G178600--Sobic008G108601 Sobic006G221200 Sobic006G221200 Sobic007G178600--Sobic006G221200 Sobic007G178600--Sobic009G163800 Sobic007G178600--Sobic003G249700 Sobic002G047600 Sobic002G047600 Sobic007G178600--Sobic002G047600 Sobic002G175100 Sobic002G175100 Sobic004G331400--Sobic002G175100 Sobic001G376600 Sobic001G376600 Sobic004G331400--Sobic001G376600 Sobic004G331400--Sobic009G163800 Sobic009G105700 Sobic009G105700 Sobic004G331400--Sobic009G105700 Sobic004G331400--Sobic003G408100 Sobic004G331400--Sobic003G346600 Sobic004G331400--Sobic009G050300 Sobic004G331400--Sobic007G178600 Sobic004G331400--Sobic001G091801 Sobic010G060500--Sobic003G346600 Sobic010G060500--Sobic006G137100 Sobic010G060500--Sobic004G008400 Sobic010G060500--Sobic009G166500 Sobic010G060500--Sobic009G050300 Sobic010G060500--Sobic007G178600 Sobic010G060500--Sobic002G255300 Sobic010G060500--Sobic006G213000 Sobic010G060500--Sobic009G163800 Sobic007G197800--Sobic006G116700 Sobic007G197800--Sobic009G050300 Sobic001G130301 Sobic001G130301 Sobic007G197800--Sobic001G130301 Sobic001G018900 Sobic001G018900 Sobic007G197800--Sobic001G018900 Sobic009G215200 Sobic009G215200 Sobic007G197800--Sobic009G215200 Sobic001G402050 Sobic001G402050 Sobic007G197800--Sobic001G402050 Sobic001G016400 Sobic001G016400 Sobic007G197800--Sobic001G016400 Sobic001G403500 Sobic001G403500 Sobic007G197800--Sobic001G403500 Sobic007G197800--Sobic004G008400 Sobic009G050300--Sobic006G116700 Sobic009G050300--Sobic004G008400 Sobic009G050300--Sobic007G197800 Sobic009G050300--Sobic002G081600 Sobic009G050300--Sobic003G346600 Sobic009G050300--Sobic009G215200 Sobic009G050300--Sobic001G403500 Sobic009G050300--Sobic001G018900 Sobic009G050300--Sobic002G379500
Octagon: transcription factors


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