Gene annotation
Transcriptome id Sobic.007G150800.1
Synonym Sb07g022480
Functional annotation expressed protein
UniProt A0A1B6PHX9
Pfam -
Panther DB PTHR34537 PTHR34537:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02180 : ferredoxin-related
RAP-DB (Rice) LOC_Os08g35710.1 : expressed protein
MaizeGDB (Corn) Zm00025a005728 , Zm00025a030749
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G150800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
2 Sobic.002G128800 fiber protein Fb34, putative, expressed -
3 Sobic.010G070500 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
4 Sobic.006G278100 expressed protein -
5 Sobic.009G212200 expressed protein -
6 Sobic.001G444800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
7 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
8 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
9 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
10 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.002G179300 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
12 Sobic.003G219800 transferase family protein, putative, expressed -
13 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
14 Sobic.006G057200 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
15 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
16 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
17 Sobic.007G198000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AIR12, putative, expressed -
18 Sobic.005G112800 erythronate-4-phosphate dehydrogenase, putative, expressed K01251: E3.3.1.1, adenosylhomocysteinase
19 Sobic.003G249700 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
20 Sobic.001G226500 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e


Gene co-expression network
sample Sobic007G150800 Sobic007G150800 Sobic001G475500 Sobic001G475500 Sobic007G150800--Sobic001G475500 Sobic002G128800 Sobic002G128800 Sobic007G150800--Sobic002G128800 Sobic010G070500 Sobic010G070500 Sobic007G150800--Sobic010G070500 Sobic006G278100 Sobic006G278100 Sobic007G150800--Sobic006G278100 Sobic009G212200 Sobic009G212200 Sobic007G150800--Sobic009G212200 Sobic001G444800 Sobic001G444800 Sobic007G150800--Sobic001G444800 Sobic003G122200 Sobic003G122200 Sobic007G150800--Sobic003G122200 Sobic009G173500 Sobic009G173500 Sobic007G150800--Sobic009G173500 Sobic003G011100 Sobic003G011100 Sobic007G150800--Sobic003G011100 Sobic001G502900 Sobic001G502900 Sobic001G475500--Sobic001G502900 Sobic003G160700 Sobic003G160700 Sobic001G475500--Sobic003G160700 Sobic001G475500--Sobic003G122200 Sobic005G113300 Sobic005G113300 Sobic001G475500--Sobic005G113300 Sobic001G475500--Sobic007G150800 Sobic001G475500--Sobic009G173500 Sobic001G361600 Sobic001G361600 Sobic001G475500--Sobic001G361600 Sobic004G220000 Sobic004G220000 Sobic001G475500--Sobic004G220000 Sobic003G117500 Sobic003G117500 Sobic001G475500--Sobic003G117500 Sobic002G252000 Sobic002G252000 Sobic002G128800--Sobic002G252000 Sobic002G128800--Sobic007G150800 Sobic001G418100 Sobic001G418100 Sobic002G128800--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic002G128800--Sobic002G396400 Sobic002G128800--Sobic001G475500 Sobic010G052200 Sobic010G052200 Sobic002G128800--Sobic010G052200 Sobic006G156000 Sobic006G156000 Sobic002G128800--Sobic006G156000 Sobic003G219800 Sobic003G219800 Sobic002G128800--Sobic003G219800 Sobic003G443300 Sobic003G443300 Sobic002G128800--Sobic003G443300 Sobic001G226500 Sobic001G226500 Sobic010G070500--Sobic001G226500 Sobic004G008400 Sobic004G008400 Sobic010G070500--Sobic004G008400 Sobic008G108601 Sobic008G108601 Sobic010G070500--Sobic008G108601 Sobic010G251600 Sobic010G251600 Sobic010G070500--Sobic010G251600 Sobic004G055100 Sobic004G055100 Sobic010G070500--Sobic004G055100 Sobic002G179300 Sobic002G179300 Sobic010G070500--Sobic002G179300 Sobic002G286900 Sobic002G286900 Sobic010G070500--Sobic002G286900 Sobic003G078200 Sobic003G078200 Sobic010G070500--Sobic003G078200 Sobic003G249700 Sobic003G249700 Sobic010G070500--Sobic003G249700 Sobic006G278100--Sobic007G150800 Sobic001G107100 Sobic001G107100 Sobic006G278100--Sobic001G107100 Sobic006G278100--Sobic002G128800 Sobic003G250700 Sobic003G250700 Sobic006G278100--Sobic003G250700 Sobic009G232200 Sobic009G232200 Sobic006G278100--Sobic009G232200 Sobic002G338400 Sobic002G338400 Sobic006G278100--Sobic002G338400 Sobic006G278100--Sobic003G122200 Sobic006G191700 Sobic006G191700 Sobic006G278100--Sobic006G191700 Sobic001G261549 Sobic001G261549 Sobic006G278100--Sobic001G261549 Sobic001G286200 Sobic001G286200 Sobic009G212200--Sobic001G286200 Sobic003G215700 Sobic003G215700 Sobic009G212200--Sobic003G215700 Sobic001G304400 Sobic001G304400 Sobic009G212200--Sobic001G304400 Sobic009G212200--Sobic003G443300 Sobic002G356400 Sobic002G356400 Sobic009G212200--Sobic002G356400 Sobic010G264300 Sobic010G264300 Sobic009G212200--Sobic010G264300 Sobic001G134400 Sobic001G134400 Sobic009G212200--Sobic001G134400 Sobic009G212200--Sobic003G249700 Sobic009G076400 Sobic009G076400 Sobic009G212200--Sobic009G076400 Sobic003G363800 Sobic003G363800 Sobic001G444800--Sobic003G363800 Sobic001G085400 Sobic001G085400 Sobic001G444800--Sobic001G085400 Sobic001G444800--Sobic009G076400 Sobic001G444800--Sobic003G249700 Sobic003G387900 Sobic003G387900 Sobic001G444800--Sobic003G387900 Sobic007G019400 Sobic007G019400 Sobic001G444800--Sobic007G019400 Sobic002G255300 Sobic002G255300 Sobic001G444800--Sobic002G255300 Sobic007G178600 Sobic007G178600 Sobic001G444800--Sobic007G178600 Sobic009G227400 Sobic009G227400 Sobic001G444800--Sobic009G227400 Sobic003G122200--Sobic001G475500 Sobic003G122200--Sobic001G418100 Sobic003G122200--Sobic007G150800 Sobic005G112800 Sobic005G112800 Sobic003G122200--Sobic005G112800 Sobic003G034600 Sobic003G034600 Sobic003G122200--Sobic003G034600 Sobic003G122200--Sobic010G264300 Sobic001G038300 Sobic001G038300 Sobic003G122200--Sobic001G038300 Sobic004G055700 Sobic004G055700 Sobic003G122200--Sobic004G055700 Sobic001G040100 Sobic001G040100 Sobic003G122200--Sobic001G040100 Sobic001G039400 Sobic001G039400 Sobic009G173500--Sobic001G039400 Sobic009G173500--Sobic001G226500 Sobic009G233400 Sobic009G233400 Sobic009G173500--Sobic009G233400 Sobic009G223300 Sobic009G223300 Sobic009G173500--Sobic009G223300 Sobic003G109600 Sobic003G109600 Sobic009G173500--Sobic003G109600 Sobic009G173500--Sobic003G078200 Sobic009G173500--Sobic003G249700 Sobic009G179100 Sobic009G179100 Sobic009G173500--Sobic009G179100 Sobic009G173500--Sobic010G070500 Sobic003G011100--Sobic007G150800 Sobic006G216600 Sobic006G216600 Sobic003G011100--Sobic006G216600 Sobic003G011100--Sobic001G475500 Sobic006G201500 Sobic006G201500 Sobic003G011100--Sobic006G201500 Sobic003G396600 Sobic003G396600 Sobic003G011100--Sobic003G396600 Sobic009G144300 Sobic009G144300 Sobic003G011100--Sobic009G144300 Sobic006G115000 Sobic006G115000 Sobic003G011100--Sobic006G115000 Sobic003G011100--Sobic003G387900 Sobic003G011100--Sobic009G233400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.