Gene annotation
Transcriptome id Sobic.006G083000.3,Sobic.006G083000.1,Sobic.006G083000.2
Synonym SNRK2-4, ASK1, SNRK2.4, Sb06g016960, SRK2A
Functional annotation CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1B6PKZ2 , A0A1B6PKY2 , A0A1B6PKZ0
Pfam PF00069 PF07714
Panther DB PTHR24343 PTHR24343:SF101
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K14498; serine/threonine-protein kinase SRK2
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G10940 : Protein kinase superfamily protein,SNF1-related protein kinase 2.10
RAP-DB (Rice) LOC_Os04g35240.1 : CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a057491 , Zm00025a020619 , Zm00025a031584 , Zm00025a011369
Brachypodium KQJ99829 , KQJ82657 , PNT61096
Barley HORVU5Hr1G018340.5 , HORVU5Hr1G018340.4 , HORVU5Hr1G018340.6 , HORVU5Hr1G018340.1 , HORVU5Hr1G018340.2 , HORVU2Hr1G125950.4 , HORVU2Hr1G125950.1 , HORVU2Hr1G125950.2 , HORVU2Hr1G125950.3 , HORVU2Hr1G075470.9 , HORVU2Hr1G075470.8 , HORVU2Hr1G075470.5 , HORVU2Hr1G075470.1 , HORVU2Hr1G075470.3 , HORVU2Hr1G075470.2 , HORVU0Hr1G011570.4 , HORVU0Hr1G011570.1 , HORVU0Hr1G011570.2 , HORVU0Hr1G011570.3 , HORVU2Hr1G075470.4 , HORVU2Hr1G075470.7 , HORVU2Hr1G075470.6 , HORVU2Hr1G075470.11 , HORVU2Hr1G075470.10 , HORVU2Hr1G075470.12
Wheat TraesCS2A02G303900 , TraesCS2D02G577000 , TraesCS2B02G320500 , TraesCS2D02G302500 , TraesCS2A02G566700 , TraesCS4A02G235600 , TraesCS1A02G270800 , TraesCS1B02G281100 , TraesCS2B02G630000
Populus PNT37001 , PNT37002 , PNT37000 , PNT36999 , PNT36998


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cDNA sequences
Sobic.006G083000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G200000 RNA recognition motif, putative, expressed -
2 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
3 Sobic.001G157800 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
4 Sobic.003G096000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
5 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
6 Sobic.003G396600 down-regulated TF in developmental senescence(PubMedID : 27586543)@ZOS5-12 - C2H2 zinc finger protein, expressed -
7 Sobic.004G344500 tubulin-specific chaperone A, putative, expressed K17292: tubulin-specific chaperone A
8 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase
9 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
10 Sobic.004G217450 - -
11 Sobic.007G183800 ankyrin repeat-containing protein, putative, expressed -
12 Sobic.005G080900 expressed protein -
13 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
14 Sobic.006G120700 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed K03434: N-acetylglucosaminylphosphatidylinositol deacetylase
15 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
16 Sobic.006G102900 expressed protein -
17 Sobic.004G258900 - -
18 Sobic.007G044400 MSP domain containing protein, expressed -
19 Sobic.001G429000 harpin-induced protein 1 domain containing protein, expressed -
20 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit


Gene co-expression network
sample Sobic006G083000 Sobic006G083000 Sobic006G200000 Sobic006G200000 Sobic006G083000--Sobic006G200000 Sobic002G385400 Sobic002G385400 Sobic006G083000--Sobic002G385400 Sobic001G157800 Sobic001G157800 Sobic006G083000--Sobic001G157800 Sobic003G096000 Sobic003G096000 Sobic006G083000--Sobic003G096000 Sobic010G265900 Sobic010G265900 Sobic006G083000--Sobic010G265900 Sobic003G396600 Sobic003G396600 Sobic006G083000--Sobic003G396600 Sobic004G344500 Sobic004G344500 Sobic006G083000--Sobic004G344500 Sobic002G186900 Sobic002G186900 Sobic006G083000--Sobic002G186900 Sobic003G034600 Sobic003G034600 Sobic006G083000--Sobic003G034600 Sobic006G120700 Sobic006G120700 Sobic006G200000--Sobic006G120700 Sobic005G080900 Sobic005G080900 Sobic006G200000--Sobic005G080900 Sobic006G200000--Sobic003G396600 Sobic006G200000--Sobic010G265900 Sobic006G200000--Sobic003G034600 Sobic010G115200 Sobic010G115200 Sobic006G200000--Sobic010G115200 Sobic006G200000--Sobic006G083000 Sobic003G300900 Sobic003G300900 Sobic006G200000--Sobic003G300900 Sobic001G410200 Sobic001G410200 Sobic006G200000--Sobic001G410200 Sobic004G217450 Sobic004G217450 Sobic002G385400--Sobic004G217450 Sobic010G023900 Sobic010G023900 Sobic002G385400--Sobic010G023900 Sobic002G258300 Sobic002G258300 Sobic002G385400--Sobic002G258300 Sobic004G342400 Sobic004G342400 Sobic002G385400--Sobic004G342400 Sobic003G084300 Sobic003G084300 Sobic002G385400--Sobic003G084300 Sobic002G385400--Sobic005G080900 Sobic002G385400--Sobic003G034600 Sobic004G274900 Sobic004G274900 Sobic002G385400--Sobic004G274900 Sobic006G115000 Sobic006G115000 Sobic002G385400--Sobic006G115000 Sobic001G157800--Sobic003G084300 Sobic001G157800--Sobic006G200000 Sobic001G157800--Sobic003G396600 Sobic001G157800--Sobic002G385400 Sobic001G157800--Sobic003G096000 Sobic003G294100 Sobic003G294100 Sobic001G157800--Sobic003G294100 Sobic001G157800--Sobic010G265900 Sobic002G361700 Sobic002G361700 Sobic001G157800--Sobic002G361700 Sobic007G044400 Sobic007G044400 Sobic001G157800--Sobic007G044400 Sobic004G056400 Sobic004G056400 Sobic003G096000--Sobic004G056400 Sobic010G089500 Sobic010G089500 Sobic003G096000--Sobic010G089500 Sobic001G350600 Sobic001G350600 Sobic003G096000--Sobic001G350600 Sobic010G101600 Sobic010G101600 Sobic003G096000--Sobic010G101600 Sobic002G356400 Sobic002G356400 Sobic003G096000--Sobic002G356400 Sobic001G030300 Sobic001G030300 Sobic003G096000--Sobic001G030300 Sobic002G180300 Sobic002G180300 Sobic003G096000--Sobic002G180300 Sobic006G013000 Sobic006G013000 Sobic003G096000--Sobic006G013000 Sobic001G047800 Sobic001G047800 Sobic003G096000--Sobic001G047800 Sobic010G265900--Sobic006G200000 Sobic005G120500 Sobic005G120500 Sobic010G265900--Sobic005G120500 Sobic006G102900 Sobic006G102900 Sobic010G265900--Sobic006G102900 Sobic010G265900--Sobic005G080900 Sobic010G265900--Sobic003G084300 Sobic009G189200 Sobic009G189200 Sobic010G265900--Sobic009G189200 Sobic010G265900--Sobic006G120700 Sobic010G265900--Sobic001G157800 Sobic010G265900--Sobic004G344500 Sobic003G396600--Sobic006G200000 Sobic004G349700 Sobic004G349700 Sobic003G396600--Sobic004G349700 Sobic003G011100 Sobic003G011100 Sobic003G396600--Sobic003G011100 Sobic003G396600--Sobic005G080900 Sobic003G396600--Sobic010G115200 Sobic009G088200 Sobic009G088200 Sobic003G396600--Sobic009G088200 Sobic002G101000 Sobic002G101000 Sobic003G396600--Sobic002G101000 Sobic010G069400 Sobic010G069400 Sobic003G396600--Sobic010G069400 Sobic001G397000 Sobic001G397000 Sobic003G396600--Sobic001G397000 Sobic001G418100 Sobic001G418100 Sobic004G344500--Sobic001G418100 Sobic003G122200 Sobic003G122200 Sobic004G344500--Sobic003G122200 Sobic002G128800 Sobic002G128800 Sobic004G344500--Sobic002G128800 Sobic004G344500--Sobic006G200000 Sobic003G443300 Sobic003G443300 Sobic004G344500--Sobic003G443300 Sobic004G344500--Sobic003G096000 Sobic003G219800 Sobic003G219800 Sobic004G344500--Sobic003G219800 Sobic001G304400 Sobic001G304400 Sobic004G344500--Sobic001G304400 Sobic001G347901 Sobic001G347901 Sobic004G344500--Sobic001G347901 Sobic009G059500 Sobic009G059500 Sobic002G186900--Sobic009G059500 Sobic002G271300 Sobic002G271300 Sobic002G186900--Sobic002G271300 Sobic002G186900--Sobic003G096000 Sobic002G186900--Sobic010G089500 Sobic002G186900--Sobic010G101600 Sobic002G186900--Sobic004G056400 Sobic001G228200 Sobic001G228200 Sobic002G186900--Sobic001G228200 Sobic002G186900--Sobic006G200000 Sobic002G186900--Sobic007G044400 Sobic003G034600--Sobic004G217450 Sobic003G034600--Sobic003G122200 Sobic001G475500 Sobic001G475500 Sobic003G034600--Sobic001G475500 Sobic003G307400 Sobic003G307400 Sobic003G034600--Sobic003G307400 Sobic006G191800 Sobic006G191800 Sobic003G034600--Sobic006G191800 Sobic003G034600--Sobic006G200000 Sobic003G160700 Sobic003G160700 Sobic003G034600--Sobic003G160700 Sobic009G173500 Sobic009G173500 Sobic003G034600--Sobic009G173500 Sobic007G150800 Sobic007G150800 Sobic003G034600--Sobic007G150800
Octagon: transcription factors


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