Gene annotation
Transcriptome id Sobic.007G183800.1
Synonym Sb07g025390
Functional annotation ankyrin repeat-containing protein, putative, expressed
UniProt C5YH88
Pfam PF13962 PF12796
Panther DB PTHR24186 PTHR24186:SF5
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31820 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os08g42960.2 : ankyrin repeat-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a014366 , Zm00025a005345
Brachypodium KQJ99228 , KQJ99229 , KQJ99232 , KQJ99231 , KQJ99230
Barley HORVU5Hr1G079730.3 , HORVU5Hr1G079730.2 , HORVU5Hr1G079730.5 , HORVU5Hr1G079730.4 , HORVU5Hr1G079730.6 , HORVU7Hr1G056430.1 , HORVU7Hr1G056430.2
Wheat TraesCS7D02G268900 , TraesCS7A02G265800 , TraesCS5A02G305200 , TraesCS5D02G312200 , TraesCS7D02G268900 , TraesCS7B02G166600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G044400 MSP domain containing protein, expressed -
2 Sobic.001G157800 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
3 Sobic.004G217450 - -
4 Sobic.004G344500 tubulin-specific chaperone A, putative, expressed K17292: tubulin-specific chaperone A
5 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
6 Sobic.009G182300 - -
7 Sobic.006G271300 C2 domain(PubMedID : 29491869)@C2 domain containing protein, putative, expressed -
8 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
9 Sobic.006G083000 CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
10 Sobic.004G336600 PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
11 Sobic.009G164700 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
12 Sobic.006G102900 expressed protein -
13 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
14 Sobic.009G126500 methyltransferase, putative, expressed -
15 Sobic.001G528600 remorin family protein, putative, expressed -
16 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
17 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
18 Sobic.010G274000 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
19 Sobic.010G080500 SAM dependent carboxyl methyltransferase, putative, expressed -
20 Sobic.001G111000 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase


Gene co-expression network
sample Sobic007G183800 Sobic007G183800 Sobic007G044400 Sobic007G044400 Sobic007G183800--Sobic007G044400 Sobic001G157800 Sobic001G157800 Sobic007G183800--Sobic001G157800 Sobic004G217450 Sobic004G217450 Sobic007G183800--Sobic004G217450 Sobic004G344500 Sobic004G344500 Sobic007G183800--Sobic004G344500 Sobic003G084300 Sobic003G084300 Sobic007G183800--Sobic003G084300 Sobic009G182300 Sobic009G182300 Sobic007G183800--Sobic009G182300 Sobic006G271300 Sobic006G271300 Sobic007G183800--Sobic006G271300 Sobic010G265900 Sobic010G265900 Sobic007G183800--Sobic010G265900 Sobic006G083000 Sobic006G083000 Sobic007G183800--Sobic006G083000 Sobic001G196100 Sobic001G196100 Sobic007G044400--Sobic001G196100 Sobic009G189200 Sobic009G189200 Sobic007G044400--Sobic009G189200 Sobic001G116000 Sobic001G116000 Sobic007G044400--Sobic001G116000 Sobic001G026600 Sobic001G026600 Sobic007G044400--Sobic001G026600 Sobic002G313600 Sobic002G313600 Sobic007G044400--Sobic002G313600 Sobic006G102900 Sobic006G102900 Sobic007G044400--Sobic006G102900 Sobic009G059500 Sobic009G059500 Sobic007G044400--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic007G044400--Sobic002G186900 Sobic007G044400--Sobic007G183800 Sobic001G157800--Sobic003G084300 Sobic006G200000 Sobic006G200000 Sobic001G157800--Sobic006G200000 Sobic003G396600 Sobic003G396600 Sobic001G157800--Sobic003G396600 Sobic002G385400 Sobic002G385400 Sobic001G157800--Sobic002G385400 Sobic003G096000 Sobic003G096000 Sobic001G157800--Sobic003G096000 Sobic003G294100 Sobic003G294100 Sobic001G157800--Sobic003G294100 Sobic001G157800--Sobic010G265900 Sobic002G361700 Sobic002G361700 Sobic001G157800--Sobic002G361700 Sobic001G157800--Sobic007G044400 Sobic004G217450--Sobic002G385400 Sobic003G034600 Sobic003G034600 Sobic004G217450--Sobic003G034600 Sobic003G279100 Sobic003G279100 Sobic004G217450--Sobic003G279100 Sobic006G149200 Sobic006G149200 Sobic004G217450--Sobic006G149200 Sobic004G274900 Sobic004G274900 Sobic004G217450--Sobic004G274900 Sobic007G198000 Sobic007G198000 Sobic004G217450--Sobic007G198000 Sobic003G174700 Sobic003G174700 Sobic004G217450--Sobic003G174700 Sobic008G025600 Sobic008G025600 Sobic004G217450--Sobic008G025600 Sobic006G115000 Sobic006G115000 Sobic004G217450--Sobic006G115000 Sobic001G418100 Sobic001G418100 Sobic004G344500--Sobic001G418100 Sobic003G122200 Sobic003G122200 Sobic004G344500--Sobic003G122200 Sobic002G128800 Sobic002G128800 Sobic004G344500--Sobic002G128800 Sobic004G344500--Sobic006G200000 Sobic003G443300 Sobic003G443300 Sobic004G344500--Sobic003G443300 Sobic004G344500--Sobic003G096000 Sobic003G219800 Sobic003G219800 Sobic004G344500--Sobic003G219800 Sobic001G304400 Sobic001G304400 Sobic004G344500--Sobic001G304400 Sobic001G347901 Sobic001G347901 Sobic004G344500--Sobic001G347901 Sobic003G084300--Sobic001G157800 Sobic009G165500 Sobic009G165500 Sobic003G084300--Sobic009G165500 Sobic003G084300--Sobic009G189200 Sobic003G011100 Sobic003G011100 Sobic003G084300--Sobic003G011100 Sobic003G084300--Sobic002G385400 Sobic003G084300--Sobic010G265900 Sobic002G258300 Sobic002G258300 Sobic003G084300--Sobic002G258300 Sobic003G084300--Sobic006G200000 Sobic003G084300--Sobic006G102900 Sobic001G007600 Sobic001G007600 Sobic009G182300--Sobic001G007600 Sobic004G138800 Sobic004G138800 Sobic009G182300--Sobic004G138800 Sobic001G505500 Sobic001G505500 Sobic009G182300--Sobic001G505500 Sobic001G418900 Sobic001G418900 Sobic009G182300--Sobic001G418900 Sobic009G182300--Sobic003G443300 Sobic005G017300 Sobic005G017300 Sobic009G182300--Sobic005G017300 Sobic010G210000 Sobic010G210000 Sobic009G182300--Sobic010G210000 Sobic009G182300--Sobic004G344500 Sobic003G127700 Sobic003G127700 Sobic009G182300--Sobic003G127700 Sobic009G164700 Sobic009G164700 Sobic006G271300--Sobic009G164700 Sobic007G176800 Sobic007G176800 Sobic006G271300--Sobic007G176800 Sobic006G271300--Sobic007G183800 Sobic006G271300--Sobic006G149200 Sobic006G271300--Sobic001G347901 Sobic006G271300--Sobic003G279100 Sobic003G297200 Sobic003G297200 Sobic006G271300--Sobic003G297200 Sobic001G505000 Sobic001G505000 Sobic006G271300--Sobic001G505000 Sobic001G399300 Sobic001G399300 Sobic006G271300--Sobic001G399300 Sobic010G265900--Sobic006G200000 Sobic005G120500 Sobic005G120500 Sobic010G265900--Sobic005G120500 Sobic010G265900--Sobic006G102900 Sobic005G080900 Sobic005G080900 Sobic010G265900--Sobic005G080900 Sobic010G265900--Sobic003G084300 Sobic010G265900--Sobic009G189200 Sobic006G120700 Sobic006G120700 Sobic010G265900--Sobic006G120700 Sobic010G265900--Sobic001G157800 Sobic010G265900--Sobic004G344500 Sobic006G083000--Sobic006G200000 Sobic006G083000--Sobic002G385400 Sobic006G083000--Sobic001G157800 Sobic006G083000--Sobic003G096000 Sobic006G083000--Sobic010G265900 Sobic006G083000--Sobic003G396600 Sobic006G083000--Sobic004G344500 Sobic006G083000--Sobic002G186900 Sobic006G083000--Sobic003G034600
Octagon: transcription factors


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