Gene annotation
Transcriptome id Sobic.006G271300.1
Synonym Sb06g033270
Functional annotation C2 domain (PubMedID : 29491869)
C2 domain containing protein, putative, expressed
UniProt C5YAM4
Pfam PF00168
Panther DB PTHR10774 PTHR10774:SF58
NCBI CDD KOG1030; Predicted Ca2+-dependent phospholipid-binding protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G63220 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os04g58570.1 : C2 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a057405
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G271300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G164700 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
2 Sobic.007G176800 acyl carrier protein, putative, expressed -
3 Sobic.007G183800 ankyrin repeat-containing protein, putative, expressed -
4 Sobic.006G149200 LSM domain containing protein, expressed K11096: SNRPD2, small nuclear ribonucleoprotein D2
5 Sobic.001G347901 - -
6 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
7 Sobic.003G297200 lipase, putative, expressed -
8 Sobic.001G505000 cyclin-dependent kinases regulatory subunit 1, putative, expressed K02219: cyclin-dependent kinase regulatory subunit CKS1
9 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
10 Sobic.004G217450 - -
11 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
12 Sobic.009G165500 Lung seven transmembrane receptor domain containing protein, putative, expressed -
13 Sobic.001G162800 expressed protein -
14 Sobic.004G285900 HMG1/2, putative, expressed -
15 Sobic.007G073600 expressed protein K16585: HAUS augmin-like complex subunit 2
16 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
17 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
18 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
19 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
20 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other


Gene co-expression network
sample Sobic006G271300 Sobic006G271300 Sobic009G164700 Sobic009G164700 Sobic006G271300--Sobic009G164700 Sobic007G176800 Sobic007G176800 Sobic006G271300--Sobic007G176800 Sobic007G183800 Sobic007G183800 Sobic006G271300--Sobic007G183800 Sobic006G149200 Sobic006G149200 Sobic006G271300--Sobic006G149200 Sobic001G347901 Sobic001G347901 Sobic006G271300--Sobic001G347901 Sobic003G279100 Sobic003G279100 Sobic006G271300--Sobic003G279100 Sobic003G297200 Sobic003G297200 Sobic006G271300--Sobic003G297200 Sobic001G505000 Sobic001G505000 Sobic006G271300--Sobic001G505000 Sobic001G399300 Sobic001G399300 Sobic006G271300--Sobic001G399300 Sobic001G035400 Sobic001G035400 Sobic009G164700--Sobic001G035400 Sobic007G092100 Sobic007G092100 Sobic009G164700--Sobic007G092100 Sobic001G542900 Sobic001G542900 Sobic009G164700--Sobic001G542900 Sobic001G010700 Sobic001G010700 Sobic009G164700--Sobic001G010700 Sobic003G330500 Sobic003G330500 Sobic009G164700--Sobic003G330500 Sobic001G196100 Sobic001G196100 Sobic009G164700--Sobic001G196100 Sobic006G203900 Sobic006G203900 Sobic009G164700--Sobic006G203900 Sobic004G066800 Sobic004G066800 Sobic009G164700--Sobic004G066800 Sobic001G096100 Sobic001G096100 Sobic009G164700--Sobic001G096100 Sobic006G134900 Sobic006G134900 Sobic007G176800--Sobic006G134900 Sobic003G442300 Sobic003G442300 Sobic007G176800--Sobic003G442300 Sobic001G261549 Sobic001G261549 Sobic007G176800--Sobic001G261549 Sobic009G189200 Sobic009G189200 Sobic007G176800--Sobic009G189200 Sobic007G214700 Sobic007G214700 Sobic007G176800--Sobic007G214700 Sobic010G230000 Sobic010G230000 Sobic007G176800--Sobic010G230000 Sobic004G355500 Sobic004G355500 Sobic007G176800--Sobic004G355500 Sobic005G047000 Sobic005G047000 Sobic007G176800--Sobic005G047000 Sobic001G169800 Sobic001G169800 Sobic007G176800--Sobic001G169800 Sobic007G044400 Sobic007G044400 Sobic007G183800--Sobic007G044400 Sobic001G157800 Sobic001G157800 Sobic007G183800--Sobic001G157800 Sobic004G217450 Sobic004G217450 Sobic007G183800--Sobic004G217450 Sobic004G344500 Sobic004G344500 Sobic007G183800--Sobic004G344500 Sobic003G084300 Sobic003G084300 Sobic007G183800--Sobic003G084300 Sobic009G182300 Sobic009G182300 Sobic007G183800--Sobic009G182300 Sobic007G183800--Sobic006G271300 Sobic010G265900 Sobic010G265900 Sobic007G183800--Sobic010G265900 Sobic006G083000 Sobic006G083000 Sobic007G183800--Sobic006G083000 Sobic006G115000 Sobic006G115000 Sobic006G149200--Sobic006G115000 Sobic002G286900 Sobic002G286900 Sobic006G149200--Sobic002G286900 Sobic003G018600 Sobic003G018600 Sobic006G149200--Sobic003G018600 Sobic003G073900 Sobic003G073900 Sobic006G149200--Sobic003G073900 Sobic006G149200--Sobic004G217450 Sobic003G150000 Sobic003G150000 Sobic006G149200--Sobic003G150000 Sobic006G231700 Sobic006G231700 Sobic006G149200--Sobic006G231700 Sobic005G110800 Sobic005G110800 Sobic006G149200--Sobic005G110800 Sobic006G159600 Sobic006G159600 Sobic006G149200--Sobic006G159600 Sobic004G342400 Sobic004G342400 Sobic001G347901--Sobic004G342400 Sobic002G308300 Sobic002G308300 Sobic001G347901--Sobic002G308300 Sobic009G016500 Sobic009G016500 Sobic001G347901--Sobic009G016500 Sobic009G179100 Sobic009G179100 Sobic001G347901--Sobic009G179100 Sobic001G370700 Sobic001G370700 Sobic001G347901--Sobic001G370700 Sobic009G233400 Sobic009G233400 Sobic001G347901--Sobic009G233400 Sobic002G415500 Sobic002G415500 Sobic001G347901--Sobic002G415500 Sobic009G173500 Sobic009G173500 Sobic001G347901--Sobic009G173500 Sobic001G334300 Sobic001G334300 Sobic001G347901--Sobic001G334300 Sobic003G279100--Sobic004G217450 Sobic003G279100--Sobic006G149200 Sobic004G285900 Sobic004G285900 Sobic003G279100--Sobic004G285900 Sobic001G300400 Sobic001G300400 Sobic003G279100--Sobic001G300400 Sobic010G222100 Sobic010G222100 Sobic003G279100--Sobic010G222100 Sobic006G081800 Sobic006G081800 Sobic003G279100--Sobic006G081800 Sobic010G215800 Sobic010G215800 Sobic003G279100--Sobic010G215800 Sobic003G279100--Sobic001G505000 Sobic003G279100--Sobic001G261549 Sobic002G351100 Sobic002G351100 Sobic003G297200--Sobic002G351100 Sobic003G297200--Sobic001G300400 Sobic006G236800 Sobic006G236800 Sobic003G297200--Sobic006G236800 Sobic001G521100 Sobic001G521100 Sobic003G297200--Sobic001G521100 Sobic002G246900 Sobic002G246900 Sobic003G297200--Sobic002G246900 Sobic002G315400 Sobic002G315400 Sobic003G297200--Sobic002G315400 Sobic007G084200 Sobic007G084200 Sobic003G297200--Sobic007G084200 Sobic003G244000 Sobic003G244000 Sobic003G297200--Sobic003G244000 Sobic002G190000 Sobic002G190000 Sobic003G297200--Sobic002G190000 Sobic009G165500 Sobic009G165500 Sobic001G505000--Sobic009G165500 Sobic001G107300 Sobic001G107300 Sobic001G505000--Sobic001G107300 Sobic001G505000--Sobic006G149200 Sobic002G289800 Sobic002G289800 Sobic001G505000--Sobic002G289800 Sobic001G505000--Sobic010G222100 Sobic001G505000--Sobic006G115000 Sobic006G013900 Sobic006G013900 Sobic001G505000--Sobic006G013900 Sobic001G429000 Sobic001G429000 Sobic001G505000--Sobic001G429000 Sobic003G174700 Sobic003G174700 Sobic001G505000--Sobic003G174700 Sobic001G042500 Sobic001G042500 Sobic001G399300--Sobic001G042500 Sobic006G158200 Sobic006G158200 Sobic001G399300--Sobic006G158200 Sobic007G195800 Sobic007G195800 Sobic001G399300--Sobic007G195800 Sobic001G399300--Sobic006G159600 Sobic001G399300--Sobic001G429000 Sobic003G146400 Sobic003G146400 Sobic001G399300--Sobic003G146400 Sobic002G348100 Sobic002G348100 Sobic001G399300--Sobic002G348100 Sobic009G216800 Sobic009G216800 Sobic001G399300--Sobic009G216800 Sobic002G113500 Sobic002G113500 Sobic001G399300--Sobic002G113500
Octagon: transcription factors


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