Gene annotation
Transcriptome id Sobic.003G297200.1
Synonym Sb03g034750
Functional annotation lipase, putative, expressed
UniProt A0A1B6Q630
Pfam -
Panther DB PTHR31479 PTHR31479:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50890 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g54810.1 : lipase, putative, expressed
MaizeGDB (Corn) Zm00025a027606 , Zm00025a040042
Brachypodium PNT72867
Barley HORVU3Hr1G072070.4 , HORVU3Hr1G072070.1 , HORVU3Hr1G072070.3 , HORVU3Hr1G072070.2
Wheat TraesCS3A02G290900 , TraesCS3D02G290700 , TraesCS3A02G290900 , TraesCS3B02G325600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G351100 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51
2 Sobic.001G300400 expansin precursor, putative, expressed -
3 Sobic.006G236800 ATEB1A-like microtubule associated protein, putative, expressed K10436: microtubule-associated protein, RP/EB family
4 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
5 Sobic.002G246900 expressed protein -
6 Sobic.002G315400 expressed protein -
7 Sobic.007G084200 expressed protein -
8 Sobic.003G244000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
9 Sobic.002G190000 ZOS9-05 - C2H2 zinc finger protein, expressed -
10 Sobic.004G168800 expressed protein -
11 Sobic.006G122200 glycosyl hydrolase family 5 protein, putative, expressed -
12 Sobic.003G134500 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
13 Sobic.006G095300 expressed protein -
14 Sobic.007G176800 acyl carrier protein, putative, expressed -
15 Sobic.002G374200 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
16 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
17 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
18 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
19 Sobic.003G109200 expressed protein -
20 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1


Gene co-expression network
sample Sobic003G297200 Sobic003G297200 Sobic002G351100 Sobic002G351100 Sobic003G297200--Sobic002G351100 Sobic001G300400 Sobic001G300400 Sobic003G297200--Sobic001G300400 Sobic006G236800 Sobic006G236800 Sobic003G297200--Sobic006G236800 Sobic001G521100 Sobic001G521100 Sobic003G297200--Sobic001G521100 Sobic002G246900 Sobic002G246900 Sobic003G297200--Sobic002G246900 Sobic002G315400 Sobic002G315400 Sobic003G297200--Sobic002G315400 Sobic007G084200 Sobic007G084200 Sobic003G297200--Sobic007G084200 Sobic003G244000 Sobic003G244000 Sobic003G297200--Sobic003G244000 Sobic002G190000 Sobic002G190000 Sobic003G297200--Sobic002G190000 Sobic002G351100--Sobic001G300400 Sobic002G351100--Sobic003G297200 Sobic002G351100--Sobic001G521100 Sobic002G351100--Sobic003G244000 Sobic002G351100--Sobic002G315400 Sobic009G194900 Sobic009G194900 Sobic002G351100--Sobic009G194900 Sobic001G440900 Sobic001G440900 Sobic002G351100--Sobic001G440900 Sobic002G351100--Sobic002G246900 Sobic001G238900 Sobic001G238900 Sobic002G351100--Sobic001G238900 Sobic001G300400--Sobic002G351100 Sobic001G289900 Sobic001G289900 Sobic001G300400--Sobic001G289900 Sobic001G300400--Sobic006G236800 Sobic001G300400--Sobic003G297200 Sobic004G047100 Sobic004G047100 Sobic001G300400--Sobic004G047100 Sobic002G289800 Sobic002G289800 Sobic001G300400--Sobic002G289800 Sobic002G426800 Sobic002G426800 Sobic001G300400--Sobic002G426800 Sobic003G102000 Sobic003G102000 Sobic001G300400--Sobic003G102000 Sobic001G091500 Sobic001G091500 Sobic001G300400--Sobic001G091500 Sobic001G025900 Sobic001G025900 Sobic006G236800--Sobic001G025900 Sobic004G328300 Sobic004G328300 Sobic006G236800--Sobic004G328300 Sobic002G113400 Sobic002G113400 Sobic006G236800--Sobic002G113400 Sobic006G236800--Sobic001G300400 Sobic006G236800--Sobic003G297200 Sobic002G271400 Sobic002G271400 Sobic006G236800--Sobic002G271400 Sobic006G236800--Sobic007G084200 Sobic006G236800--Sobic001G521100 Sobic009G138300 Sobic009G138300 Sobic006G236800--Sobic009G138300 Sobic001G521100--Sobic002G113400 Sobic001G521100--Sobic002G246900 Sobic001G521100--Sobic002G351100 Sobic001G521100--Sobic002G315400 Sobic001G521100--Sobic001G025900 Sobic006G119300 Sobic006G119300 Sobic001G521100--Sobic006G119300 Sobic001G521100--Sobic006G236800 Sobic003G442300 Sobic003G442300 Sobic001G521100--Sobic003G442300 Sobic001G521100--Sobic003G297200 Sobic002G246900--Sobic004G047100 Sobic010G105400 Sobic010G105400 Sobic002G246900--Sobic010G105400 Sobic010G191000 Sobic010G191000 Sobic002G246900--Sobic010G191000 Sobic003G107200 Sobic003G107200 Sobic002G246900--Sobic003G107200 Sobic002G246900--Sobic001G238900 Sobic009G181500 Sobic009G181500 Sobic002G246900--Sobic009G181500 Sobic002G236700 Sobic002G236700 Sobic002G246900--Sobic002G236700 Sobic001G169800 Sobic001G169800 Sobic002G246900--Sobic001G169800 Sobic002G230800 Sobic002G230800 Sobic002G246900--Sobic002G230800 Sobic002G315400--Sobic001G521100 Sobic002G092200 Sobic002G092200 Sobic002G315400--Sobic002G092200 Sobic002G315400--Sobic002G351100 Sobic002G315400--Sobic002G236700 Sobic009G109300 Sobic009G109300 Sobic002G315400--Sobic009G109300 Sobic003G412800 Sobic003G412800 Sobic002G315400--Sobic003G412800 Sobic002G315400--Sobic003G297200 Sobic002G315400--Sobic002G246900 Sobic007G112100 Sobic007G112100 Sobic002G315400--Sobic007G112100 Sobic003G226700 Sobic003G226700 Sobic007G084200--Sobic003G226700 Sobic009G212100 Sobic009G212100 Sobic007G084200--Sobic009G212100 Sobic003G420300 Sobic003G420300 Sobic007G084200--Sobic003G420300 Sobic001G487200 Sobic001G487200 Sobic007G084200--Sobic001G487200 Sobic003G345000 Sobic003G345000 Sobic007G084200--Sobic003G345000 Sobic003G292700 Sobic003G292700 Sobic007G084200--Sobic003G292700 Sobic006G218900 Sobic006G218900 Sobic007G084200--Sobic006G218900 Sobic001G369800 Sobic001G369800 Sobic007G084200--Sobic001G369800 Sobic004G315700 Sobic004G315700 Sobic007G084200--Sobic004G315700 Sobic003G244000--Sobic001G238900 Sobic001G054700 Sobic001G054700 Sobic003G244000--Sobic001G054700 Sobic007G201900 Sobic007G201900 Sobic003G244000--Sobic007G201900 Sobic003G244000--Sobic002G230800 Sobic003G244000--Sobic002G351100 Sobic001G118800 Sobic001G118800 Sobic003G244000--Sobic001G118800 Sobic009G143200 Sobic009G143200 Sobic003G244000--Sobic009G143200 Sobic005G157300 Sobic005G157300 Sobic003G244000--Sobic005G157300 Sobic004G317000 Sobic004G317000 Sobic003G244000--Sobic004G317000 Sobic003G055600 Sobic003G055600 Sobic002G190000--Sobic003G055600 Sobic001G377700 Sobic001G377700 Sobic002G190000--Sobic001G377700 Sobic002G190000--Sobic001G238900 Sobic005G110535 Sobic005G110535 Sobic002G190000--Sobic005G110535 Sobic004G053900 Sobic004G053900 Sobic002G190000--Sobic004G053900 Sobic002G290000 Sobic002G290000 Sobic002G190000--Sobic002G290000 Sobic002G190000--Sobic001G118800 Sobic002G190000--Sobic002G246900 Sobic001G013400 Sobic001G013400 Sobic002G190000--Sobic001G013400
Octagon: transcription factors


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