Gene annotation
Transcriptome id Sobic.006G122200.1
Synonym Sb06g020260
Functional annotation glycosyl hydrolase family 5 protein, putative, expressed
UniProt C5YAS6
Pfam PF00150
Panther DB PTHR31263 PTHR31263:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G13130 : Cellulase (glycosyl hydrolase family 5) protein
RAP-DB (Rice) LOC_Os04g40500.1 : glycosyl hydrolase family 5 protein, putative, expressed
MaizeGDB (Corn) Zm00025a056311
Brachypodium KQJ83175
Barley HORVU2Hr1G083030.1 , HORVU2Hr1G083070.4 , HORVU2Hr1G083070.5 , HORVU2Hr1G083070.6 , HORVU2Hr1G083070.7 , HORVU2Hr1G083070.1 , HORVU2Hr1G083070.2 , HORVU2Hr1G083070.3 , HORVU2Hr1G083070.8 , HORVU2Hr1G083070.9 , HORVU2Hr1G083070.10
Wheat TraesCS2A02G324900 , TraesCS2D02G338000 , TraesCS2D02G338100 , TraesCS2B02G357400
Populus -


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cDNA sequences
Sobic.006G122200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G015300 expressed protein K16587: HAUS augmin-like complex subunit 4
2 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -
3 Sobic.006G236800 ATEB1A-like microtubule associated protein, putative, expressed K10436: microtubule-associated protein, RP/EB family
4 Sobic.005G047000 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
5 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
6 Sobic.003G297200 lipase, putative, expressed -
7 Sobic.002G387800 - K12456: anaphase-promoting complex subunit 13
8 Sobic.010G002800 AGAP000326-PA, putative, expressed K18163: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
9 Sobic.007G022700 proteasome subunit, putative, expressed K12177: COPS3, COP9 signalosome complex subunit 3
10 Sobic.004G129500 expressed protein -
11 Sobic.002G153400 meiotic coiled-coil protein 7, putative, expressed -
12 Sobic.003G085500 signal peptidase complex subunit 3, putative, expressed K12948: SPCS3, signal peptidase complex subunit 3
13 Sobic.006G127200 kelch repeat protein, putative, expressed -
14 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
15 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
16 Sobic.004G007700 pentatricopeptide, putative, expressed -
17 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
18 Sobic.003G075200 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
19 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
20 Sobic.009G131200 expressed protein -


Gene co-expression network
sample Sobic006G122200 Sobic006G122200 Sobic004G015300 Sobic004G015300 Sobic006G122200--Sobic004G015300 Sobic002G232400 Sobic002G232400 Sobic006G122200--Sobic002G232400 Sobic006G236800 Sobic006G236800 Sobic006G122200--Sobic006G236800 Sobic005G047000 Sobic005G047000 Sobic006G122200--Sobic005G047000 Sobic001G296800 Sobic001G296800 Sobic006G122200--Sobic001G296800 Sobic003G297200 Sobic003G297200 Sobic006G122200--Sobic003G297200 Sobic002G387800 Sobic002G387800 Sobic006G122200--Sobic002G387800 Sobic010G002800 Sobic010G002800 Sobic006G122200--Sobic010G002800 Sobic007G022700 Sobic007G022700 Sobic006G122200--Sobic007G022700 Sobic004G015300--Sobic001G296800 Sobic004G015300--Sobic006G122200 Sobic009G212100 Sobic009G212100 Sobic004G015300--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic004G015300--Sobic004G315700 Sobic004G015300--Sobic005G047000 Sobic001G487200 Sobic001G487200 Sobic004G015300--Sobic001G487200 Sobic006G245700 Sobic006G245700 Sobic004G015300--Sobic006G245700 Sobic007G084200 Sobic007G084200 Sobic004G015300--Sobic007G084200 Sobic001G115500 Sobic001G115500 Sobic004G015300--Sobic001G115500 Sobic002G153000 Sobic002G153000 Sobic002G232400--Sobic002G153000 Sobic002G090500 Sobic002G090500 Sobic002G232400--Sobic002G090500 Sobic001G352800 Sobic001G352800 Sobic002G232400--Sobic001G352800 Sobic001G192700 Sobic001G192700 Sobic002G232400--Sobic001G192700 Sobic002G268700 Sobic002G268700 Sobic002G232400--Sobic002G268700 Sobic002G232400--Sobic010G002800 Sobic004G218600 Sobic004G218600 Sobic002G232400--Sobic004G218600 Sobic008G084100 Sobic008G084100 Sobic002G232400--Sobic008G084100 Sobic010G018500 Sobic010G018500 Sobic002G232400--Sobic010G018500 Sobic001G025900 Sobic001G025900 Sobic006G236800--Sobic001G025900 Sobic004G328300 Sobic004G328300 Sobic006G236800--Sobic004G328300 Sobic002G113400 Sobic002G113400 Sobic006G236800--Sobic002G113400 Sobic001G300400 Sobic001G300400 Sobic006G236800--Sobic001G300400 Sobic006G236800--Sobic003G297200 Sobic002G271400 Sobic002G271400 Sobic006G236800--Sobic002G271400 Sobic006G236800--Sobic007G084200 Sobic001G521100 Sobic001G521100 Sobic006G236800--Sobic001G521100 Sobic009G138300 Sobic009G138300 Sobic006G236800--Sobic009G138300 Sobic009G119700 Sobic009G119700 Sobic005G047000--Sobic009G119700 Sobic006G129900 Sobic006G129900 Sobic005G047000--Sobic006G129900 Sobic007G044400 Sobic007G044400 Sobic005G047000--Sobic007G044400 Sobic005G047000--Sobic004G015300 Sobic001G347901 Sobic001G347901 Sobic005G047000--Sobic001G347901 Sobic007G176800 Sobic007G176800 Sobic005G047000--Sobic007G176800 Sobic009G151700 Sobic009G151700 Sobic005G047000--Sobic009G151700 Sobic004G010700 Sobic004G010700 Sobic005G047000--Sobic004G010700 Sobic009G189200 Sobic009G189200 Sobic005G047000--Sobic009G189200 Sobic001G296800--Sobic009G212100 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G296800--Sobic001G487200 Sobic004G129500 Sobic004G129500 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic002G370400 Sobic002G370400 Sobic001G296800--Sobic002G370400 Sobic001G212600 Sobic001G212600 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100 Sobic002G351100 Sobic002G351100 Sobic003G297200--Sobic002G351100 Sobic003G297200--Sobic001G300400 Sobic003G297200--Sobic006G236800 Sobic003G297200--Sobic001G521100 Sobic002G246900 Sobic002G246900 Sobic003G297200--Sobic002G246900 Sobic002G315400 Sobic002G315400 Sobic003G297200--Sobic002G315400 Sobic003G297200--Sobic007G084200 Sobic003G244000 Sobic003G244000 Sobic003G297200--Sobic003G244000 Sobic002G190000 Sobic002G190000 Sobic003G297200--Sobic002G190000 Sobic009G211900 Sobic009G211900 Sobic002G387800--Sobic009G211900 Sobic009G206600 Sobic009G206600 Sobic002G387800--Sobic009G206600 Sobic003G074900 Sobic003G074900 Sobic002G387800--Sobic003G074900 Sobic006G203900 Sobic006G203900 Sobic002G387800--Sobic006G203900 Sobic002G217500 Sobic002G217500 Sobic002G387800--Sobic002G217500 Sobic003G016300 Sobic003G016300 Sobic002G387800--Sobic003G016300 Sobic002G387800--Sobic001G192700 Sobic002G387800--Sobic008G084100 Sobic006G124300 Sobic006G124300 Sobic002G387800--Sobic006G124300 Sobic010G002800--Sobic001G352800 Sobic003G085500 Sobic003G085500 Sobic010G002800--Sobic003G085500 Sobic003G388700 Sobic003G388700 Sobic010G002800--Sobic003G388700 Sobic010G002800--Sobic002G232400 Sobic001G309200 Sobic001G309200 Sobic010G002800--Sobic001G309200 Sobic004G186100 Sobic004G186100 Sobic010G002800--Sobic004G186100 Sobic002G222200 Sobic002G222200 Sobic010G002800--Sobic002G222200 Sobic001G073600 Sobic001G073600 Sobic010G002800--Sobic001G073600 Sobic004G007700 Sobic004G007700 Sobic010G002800--Sobic004G007700 Sobic004G256300 Sobic004G256300 Sobic007G022700--Sobic004G256300 Sobic003G222700 Sobic003G222700 Sobic007G022700--Sobic003G222700 Sobic007G022700--Sobic003G085500 Sobic007G022700--Sobic002G232400 Sobic009G207200 Sobic009G207200 Sobic007G022700--Sobic009G207200 Sobic007G022700--Sobic004G186100 Sobic001G191900 Sobic001G191900 Sobic007G022700--Sobic001G191900 Sobic006G259900 Sobic006G259900 Sobic007G022700--Sobic006G259900 Sobic003G005900 Sobic003G005900 Sobic007G022700--Sobic003G005900
Octagon: transcription factors


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