Gene annotation
Transcriptome id Sobic.006G236800.1
Synonym EB1B, Sb06g030360, ATEB1B, ATEB1
Functional annotation ATEB1A-like microtubule associated protein, putative, expressed
UniProt C5Y8Z5
Pfam PF00307 PF03271
Panther DB PTHR10623 PTHR10623:SF19
NCBI CDD KOG3000; Microtubule-binding protein involved in cell cycle control
KEGG Orthology K10436; microtubule-associated protein, RP/EB family
Gene Ontology GO:0005515; protein binding GO:0008017microtubule binding


Orthologs (automatic annotation)
TAIR AT3G47690 : microtubule end binding protein EB1A
RAP-DB (Rice) LOC_Os04g54940.1 : ATEB1A-like microtubule associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a009580
Brachypodium PNT61977 , KQJ84903
Barley HORVU2Hr1G115160.8 , HORVU2Hr1G115160.9 , HORVU2Hr1G115160.2 , HORVU2Hr1G115160.3 , HORVU2Hr1G115160.6 , HORVU2Hr1G115160.7 , HORVU2Hr1G115160.4 , HORVU2Hr1G115160.5 , HORVU2Hr1G115160.1
Wheat TraesCS2D02G523000 , TraesCS2D02G523000 , TraesCS2D02G523000 , TraesCS2A02G521300 , TraesCS2A02G521300 , TraesCS2A02G521300 , TraesCS2A02G521300
Populus -


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cDNA sequences
Sobic.006G236800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G025900 expressed protein -
2 Sobic.004G328300 expressed protein -
3 Sobic.002G113400 dnaJ domain containing protein, expressed -
4 Sobic.001G300400 expansin precursor, putative, expressed -
5 Sobic.003G297200 lipase, putative, expressed -
6 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
7 Sobic.007G084200 expressed protein -
8 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
9 Sobic.009G138300 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
10 Sobic.003G007200 aquaporin protein, putative, expressed K09873: aquaporin TIP
11 Sobic.008G070700 leafbladeless1, putative, expressed -
12 Sobic.001G013400 nuf2 family protein, expressed -
13 Sobic.005G055600 myosin heavy chain-related, putative, expressed -
14 Sobic.007G017100 - -
15 Sobic.001G033300 expansin precursor, putative, expressed -
16 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
17 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1
18 Sobic.010G222800 expressed protein -
19 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
20 Sobic.007G018500 galactosyltransferase family protein, putative, expressed -


Gene co-expression network
sample Sobic006G236800 Sobic006G236800 Sobic001G025900 Sobic001G025900 Sobic006G236800--Sobic001G025900 Sobic004G328300 Sobic004G328300 Sobic006G236800--Sobic004G328300 Sobic002G113400 Sobic002G113400 Sobic006G236800--Sobic002G113400 Sobic001G300400 Sobic001G300400 Sobic006G236800--Sobic001G300400 Sobic003G297200 Sobic003G297200 Sobic006G236800--Sobic003G297200 Sobic002G271400 Sobic002G271400 Sobic006G236800--Sobic002G271400 Sobic007G084200 Sobic007G084200 Sobic006G236800--Sobic007G084200 Sobic001G521100 Sobic001G521100 Sobic006G236800--Sobic001G521100 Sobic009G138300 Sobic009G138300 Sobic006G236800--Sobic009G138300 Sobic001G013400 Sobic001G013400 Sobic001G025900--Sobic001G013400 Sobic001G025900--Sobic002G113400 Sobic002G290000 Sobic002G290000 Sobic001G025900--Sobic002G290000 Sobic001G025900--Sobic002G271400 Sobic005G110535 Sobic005G110535 Sobic001G025900--Sobic005G110535 Sobic004G321400 Sobic004G321400 Sobic001G025900--Sobic004G321400 Sobic004G053900 Sobic004G053900 Sobic001G025900--Sobic004G053900 Sobic001G025900--Sobic004G328300 Sobic001G025900--Sobic006G236800 Sobic005G055600 Sobic005G055600 Sobic004G328300--Sobic005G055600 Sobic006G193100 Sobic006G193100 Sobic004G328300--Sobic006G193100 Sobic003G315700 Sobic003G315700 Sobic004G328300--Sobic003G315700 Sobic004G328300--Sobic004G053900 Sobic004G328300--Sobic001G025900 Sobic001G023500 Sobic001G023500 Sobic004G328300--Sobic001G023500 Sobic001G154300 Sobic001G154300 Sobic004G328300--Sobic001G154300 Sobic009G202801 Sobic009G202801 Sobic004G328300--Sobic009G202801 Sobic004G328300--Sobic002G113400 Sobic002G113400--Sobic004G053900 Sobic002G113400--Sobic001G025900 Sobic002G297500 Sobic002G297500 Sobic002G113400--Sobic002G297500 Sobic002G113400--Sobic002G290000 Sobic002G113400--Sobic001G013400 Sobic008G148000 Sobic008G148000 Sobic002G113400--Sobic008G148000 Sobic002G113400--Sobic005G110535 Sobic007G125300 Sobic007G125300 Sobic002G113400--Sobic007G125300 Sobic010G051100 Sobic010G051100 Sobic002G113400--Sobic010G051100 Sobic002G351100 Sobic002G351100 Sobic001G300400--Sobic002G351100 Sobic001G289900 Sobic001G289900 Sobic001G300400--Sobic001G289900 Sobic001G300400--Sobic006G236800 Sobic001G300400--Sobic003G297200 Sobic004G047100 Sobic004G047100 Sobic001G300400--Sobic004G047100 Sobic002G289800 Sobic002G289800 Sobic001G300400--Sobic002G289800 Sobic002G426800 Sobic002G426800 Sobic001G300400--Sobic002G426800 Sobic003G102000 Sobic003G102000 Sobic001G300400--Sobic003G102000 Sobic001G091500 Sobic001G091500 Sobic001G300400--Sobic001G091500 Sobic003G297200--Sobic002G351100 Sobic003G297200--Sobic001G300400 Sobic003G297200--Sobic006G236800 Sobic003G297200--Sobic001G521100 Sobic002G246900 Sobic002G246900 Sobic003G297200--Sobic002G246900 Sobic002G315400 Sobic002G315400 Sobic003G297200--Sobic002G315400 Sobic003G297200--Sobic007G084200 Sobic003G244000 Sobic003G244000 Sobic003G297200--Sobic003G244000 Sobic002G190000 Sobic002G190000 Sobic003G297200--Sobic002G190000 Sobic004G306100 Sobic004G306100 Sobic002G271400--Sobic004G306100 Sobic003G343200 Sobic003G343200 Sobic002G271400--Sobic003G343200 Sobic006G127200 Sobic006G127200 Sobic002G271400--Sobic006G127200 Sobic003G411700 Sobic003G411700 Sobic002G271400--Sobic003G411700 Sobic002G271400--Sobic001G025900 Sobic010G222800 Sobic010G222800 Sobic002G271400--Sobic010G222800 Sobic003G013800 Sobic003G013800 Sobic002G271400--Sobic003G013800 Sobic008G004900 Sobic008G004900 Sobic002G271400--Sobic008G004900 Sobic010G024000 Sobic010G024000 Sobic002G271400--Sobic010G024000 Sobic003G226700 Sobic003G226700 Sobic007G084200--Sobic003G226700 Sobic009G212100 Sobic009G212100 Sobic007G084200--Sobic009G212100 Sobic003G420300 Sobic003G420300 Sobic007G084200--Sobic003G420300 Sobic001G487200 Sobic001G487200 Sobic007G084200--Sobic001G487200 Sobic003G345000 Sobic003G345000 Sobic007G084200--Sobic003G345000 Sobic003G292700 Sobic003G292700 Sobic007G084200--Sobic003G292700 Sobic006G218900 Sobic006G218900 Sobic007G084200--Sobic006G218900 Sobic001G369800 Sobic001G369800 Sobic007G084200--Sobic001G369800 Sobic004G315700 Sobic004G315700 Sobic007G084200--Sobic004G315700 Sobic001G521100--Sobic002G113400 Sobic001G521100--Sobic002G246900 Sobic001G521100--Sobic002G351100 Sobic001G521100--Sobic002G315400 Sobic001G521100--Sobic001G025900 Sobic006G119300 Sobic006G119300 Sobic001G521100--Sobic006G119300 Sobic001G521100--Sobic006G236800 Sobic003G442300 Sobic003G442300 Sobic001G521100--Sobic003G442300 Sobic001G521100--Sobic003G297200 Sobic010G243100 Sobic010G243100 Sobic009G138300--Sobic010G243100 Sobic009G138300--Sobic004G328300 Sobic010G009700 Sobic010G009700 Sobic009G138300--Sobic010G009700 Sobic003G289700 Sobic003G289700 Sobic009G138300--Sobic003G289700 Sobic009G138300--Sobic006G236800 Sobic009G136000 Sobic009G136000 Sobic009G138300--Sobic009G136000 Sobic003G320100 Sobic003G320100 Sobic009G138300--Sobic003G320100 Sobic001G248400 Sobic001G248400 Sobic009G138300--Sobic001G248400 Sobic010G030000 Sobic010G030000 Sobic009G138300--Sobic010G030000
Octagon: transcription factors


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