Gene annotation
Transcriptome id Sobic.005G047000.1
Synonym
Functional annotation ubiquinol-cytochrome C reductase hinge protein, putative, expressed
UniProt A0A1B6PQ63
Pfam PF02320
Panther DB PTHR15336 PTHR15336:SF2
NCBI CDD KOG4763; Ubiquinol-cytochrome c reductase hinge protein
KEGG Orthology K00416; QCR6, ubiquinol-cytochrome c reductase subunit 6
Gene Ontology GO:0008121; ubiquinol-cytochrome-c reductase activity GO:0006122mitochondrial electron transport, ubiquinol to cytochrome c


Orthologs (automatic annotation)
TAIR AT1G15120 : Ubiquinol-cytochrome C reductase hinge protein
RAP-DB (Rice) LOC_Os11g06340.1 : ubiquinol-cytochrome C reductase hinge protein, putative, expressed
MaizeGDB (Corn) Zm00025a034167
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G047000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G119700 acetyltransferase, GNAT family, putative, expressed -
2 Sobic.006G129900 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
3 Sobic.007G044400 MSP domain containing protein, expressed -
4 Sobic.004G015300 expressed protein K16587: HAUS augmin-like complex subunit 4
5 Sobic.001G347901 - -
6 Sobic.007G176800 acyl carrier protein, putative, expressed -
7 Sobic.009G151700 protein of unknown function DUF502 domain containing protein, expressed -
8 Sobic.004G010700 expressed protein -
9 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
10 Sobic.006G122200 glycosyl hydrolase family 5 protein, putative, expressed -
11 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
12 Sobic.006G120700 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed K03434: N-acetylglucosaminylphosphatidylinositol deacetylase
13 Sobic.009G102100 DUF538 domain containing protein, putative, expressed -
14 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
15 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
16 Sobic.001G261549 - -
17 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1
18 Sobic.010G032700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase domain containing protein, expressed K11434: type I protein arginine methyltransferase
19 Sobic.004G342400 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
20 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2


Gene co-expression network
sample Sobic005G047000 Sobic005G047000 Sobic009G119700 Sobic009G119700 Sobic005G047000--Sobic009G119700 Sobic006G129900 Sobic006G129900 Sobic005G047000--Sobic006G129900 Sobic007G044400 Sobic007G044400 Sobic005G047000--Sobic007G044400 Sobic004G015300 Sobic004G015300 Sobic005G047000--Sobic004G015300 Sobic001G347901 Sobic001G347901 Sobic005G047000--Sobic001G347901 Sobic007G176800 Sobic007G176800 Sobic005G047000--Sobic007G176800 Sobic009G151700 Sobic009G151700 Sobic005G047000--Sobic009G151700 Sobic004G010700 Sobic004G010700 Sobic005G047000--Sobic004G010700 Sobic009G189200 Sobic009G189200 Sobic005G047000--Sobic009G189200 Sobic002G303800 Sobic002G303800 Sobic009G119700--Sobic002G303800 Sobic001G146900 Sobic001G146900 Sobic009G119700--Sobic001G146900 Sobic010G103700 Sobic010G103700 Sobic009G119700--Sobic010G103700 Sobic003G412800 Sobic003G412800 Sobic009G119700--Sobic003G412800 Sobic001G051300 Sobic001G051300 Sobic009G119700--Sobic001G051300 Sobic003G444300 Sobic003G444300 Sobic009G119700--Sobic003G444300 Sobic003G179500 Sobic003G179500 Sobic009G119700--Sobic003G179500 Sobic007G139500 Sobic007G139500 Sobic009G119700--Sobic007G139500 Sobic001G169800 Sobic001G169800 Sobic009G119700--Sobic001G169800 Sobic006G129900--Sobic005G047000 Sobic006G129900--Sobic004G010700 Sobic005G178300 Sobic005G178300 Sobic006G129900--Sobic005G178300 Sobic010G258000 Sobic010G258000 Sobic006G129900--Sobic010G258000 Sobic007G165300 Sobic007G165300 Sobic006G129900--Sobic007G165300 Sobic006G129900--Sobic004G015300 Sobic003G248300 Sobic003G248300 Sobic006G129900--Sobic003G248300 Sobic001G176900 Sobic001G176900 Sobic006G129900--Sobic001G176900 Sobic005G110526 Sobic005G110526 Sobic006G129900--Sobic005G110526 Sobic001G196100 Sobic001G196100 Sobic007G044400--Sobic001G196100 Sobic007G044400--Sobic009G189200 Sobic001G116000 Sobic001G116000 Sobic007G044400--Sobic001G116000 Sobic001G026600 Sobic001G026600 Sobic007G044400--Sobic001G026600 Sobic002G313600 Sobic002G313600 Sobic007G044400--Sobic002G313600 Sobic006G102900 Sobic006G102900 Sobic007G044400--Sobic006G102900 Sobic009G059500 Sobic009G059500 Sobic007G044400--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic007G044400--Sobic002G186900 Sobic007G183800 Sobic007G183800 Sobic007G044400--Sobic007G183800 Sobic001G296800 Sobic001G296800 Sobic004G015300--Sobic001G296800 Sobic006G122200 Sobic006G122200 Sobic004G015300--Sobic006G122200 Sobic009G212100 Sobic009G212100 Sobic004G015300--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic004G015300--Sobic004G315700 Sobic004G015300--Sobic005G047000 Sobic001G487200 Sobic001G487200 Sobic004G015300--Sobic001G487200 Sobic006G245700 Sobic006G245700 Sobic004G015300--Sobic006G245700 Sobic007G084200 Sobic007G084200 Sobic004G015300--Sobic007G084200 Sobic001G115500 Sobic001G115500 Sobic004G015300--Sobic001G115500 Sobic004G342400 Sobic004G342400 Sobic001G347901--Sobic004G342400 Sobic002G308300 Sobic002G308300 Sobic001G347901--Sobic002G308300 Sobic009G016500 Sobic009G016500 Sobic001G347901--Sobic009G016500 Sobic009G179100 Sobic009G179100 Sobic001G347901--Sobic009G179100 Sobic001G370700 Sobic001G370700 Sobic001G347901--Sobic001G370700 Sobic009G233400 Sobic009G233400 Sobic001G347901--Sobic009G233400 Sobic002G415500 Sobic002G415500 Sobic001G347901--Sobic002G415500 Sobic009G173500 Sobic009G173500 Sobic001G347901--Sobic009G173500 Sobic001G334300 Sobic001G334300 Sobic001G347901--Sobic001G334300 Sobic006G134900 Sobic006G134900 Sobic007G176800--Sobic006G134900 Sobic003G442300 Sobic003G442300 Sobic007G176800--Sobic003G442300 Sobic001G261549 Sobic001G261549 Sobic007G176800--Sobic001G261549 Sobic007G176800--Sobic009G189200 Sobic007G214700 Sobic007G214700 Sobic007G176800--Sobic007G214700 Sobic010G230000 Sobic010G230000 Sobic007G176800--Sobic010G230000 Sobic004G355500 Sobic004G355500 Sobic007G176800--Sobic004G355500 Sobic007G176800--Sobic005G047000 Sobic007G176800--Sobic001G169800 Sobic006G267500 Sobic006G267500 Sobic009G151700--Sobic006G267500 Sobic009G206500 Sobic009G206500 Sobic009G151700--Sobic009G206500 Sobic003G345200 Sobic003G345200 Sobic009G151700--Sobic003G345200 Sobic009G151700--Sobic007G139500 Sobic009G246700 Sobic009G246700 Sobic009G151700--Sobic009G246700 Sobic007G040301 Sobic007G040301 Sobic009G151700--Sobic007G040301 Sobic009G061000 Sobic009G061000 Sobic009G151700--Sobic009G061000 Sobic002G161700 Sobic002G161700 Sobic009G151700--Sobic002G161700 Sobic009G151700--Sobic009G119700 Sobic009G201800 Sobic009G201800 Sobic004G010700--Sobic009G201800 Sobic009G258500 Sobic009G258500 Sobic004G010700--Sobic009G258500 Sobic002G054000 Sobic002G054000 Sobic004G010700--Sobic002G054000 Sobic002G101000 Sobic002G101000 Sobic004G010700--Sobic002G101000 Sobic002G277200 Sobic002G277200 Sobic004G010700--Sobic002G277200 Sobic004G010700--Sobic006G129900 Sobic001G382200 Sobic001G382200 Sobic004G010700--Sobic001G382200 Sobic009G234400 Sobic009G234400 Sobic004G010700--Sobic009G234400 Sobic009G104100 Sobic009G104100 Sobic004G010700--Sobic009G104100 Sobic009G189200--Sobic006G102900 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic009G189200--Sobic007G044400 Sobic004G285900 Sobic004G285900 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic003G122200 Sobic003G122200 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600
Octagon: transcription factors


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