Gene annotation
Transcriptome id Sobic.002G387800.1
Synonym BNS, Sb02g040400
Functional annotation -
UniProt C5X391
Pfam PF05839
Panther DB PTHR28672 PTHR28672:SF1
NCBI CDD -
KEGG Orthology K12456; anaphase-promoting complex subunit 13
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G73177 : bonsai
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium KQK15052
Barley HORVU2Hr1G028050.5 , HORVU2Hr1G028050.4 , HORVU2Hr1G028050.6 , HORVU2Hr1G028050.1 , HORVU2Hr1G028050.3 , HORVU2Hr1G028050.2
Wheat TraesCS2A02G154500 , TraesCS2A02G154500 , TraesCS2B02G179700 , TraesCS2B02G179700 , TraesCS2D02G160000
Populus -


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cDNA sequences
Sobic.002G387800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G211900 expressed protein -
2 Sobic.009G206600 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
3 Sobic.003G074900 expressed protein -
4 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
5 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
6 Sobic.003G016300 SFT2, putative, expressed -
7 Sobic.001G192700 major facilitator superfamily domain-containing protein 5, putative, expressed -
8 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
9 Sobic.006G124300 metalloprotease ATP23, putative, expressed K18156: ATP23, mitochondrial inner membrane protease ATP23
10 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
11 Sobic.009G054000 expressed protein -
12 Sobic.003G238500 -(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
13 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
14 Sobic.003G075200 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
15 Sobic.001G135200 OB-fold nucleic acid binding domain containing protein, putative, expressed K15365: RecQ-mediated genome instability protein 2
16 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
17 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
18 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -
19 Sobic.008G025700 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
20 Sobic.001G219800 methyltransferase, putative, expressed -


Gene co-expression network
sample Sobic002G387800 Sobic002G387800 Sobic009G211900 Sobic009G211900 Sobic002G387800--Sobic009G211900 Sobic009G206600 Sobic009G206600 Sobic002G387800--Sobic009G206600 Sobic003G074900 Sobic003G074900 Sobic002G387800--Sobic003G074900 Sobic006G203900 Sobic006G203900 Sobic002G387800--Sobic006G203900 Sobic002G217500 Sobic002G217500 Sobic002G387800--Sobic002G217500 Sobic003G016300 Sobic003G016300 Sobic002G387800--Sobic003G016300 Sobic001G192700 Sobic001G192700 Sobic002G387800--Sobic001G192700 Sobic008G084100 Sobic008G084100 Sobic002G387800--Sobic008G084100 Sobic006G124300 Sobic006G124300 Sobic002G387800--Sobic006G124300 Sobic009G215300 Sobic009G215300 Sobic009G211900--Sobic009G215300 Sobic009G211900--Sobic006G124300 Sobic001G181500 Sobic001G181500 Sobic009G211900--Sobic001G181500 Sobic009G211900--Sobic006G203900 Sobic003G135600 Sobic003G135600 Sobic009G211900--Sobic003G135600 Sobic002G309700 Sobic002G309700 Sobic009G211900--Sobic002G309700 Sobic008G136800 Sobic008G136800 Sobic009G211900--Sobic008G136800 Sobic001G073600 Sobic001G073600 Sobic009G211900--Sobic001G073600 Sobic004G260200 Sobic004G260200 Sobic009G211900--Sobic004G260200 Sobic004G039400 Sobic004G039400 Sobic009G206600--Sobic004G039400 Sobic009G206600--Sobic002G387800 Sobic009G206600--Sobic001G073600 Sobic009G206600--Sobic006G203900 Sobic003G388700 Sobic003G388700 Sobic009G206600--Sobic003G388700 Sobic004G186100 Sobic004G186100 Sobic009G206600--Sobic004G186100 Sobic007G003100 Sobic007G003100 Sobic009G206600--Sobic007G003100 Sobic008G018300 Sobic008G018300 Sobic009G206600--Sobic008G018300 Sobic009G206600--Sobic002G217500 Sobic003G074900--Sobic008G136800 Sobic003G074900--Sobic006G124300 Sobic003G074900--Sobic006G203900 Sobic003G074900--Sobic002G387800 Sobic003G074900--Sobic009G211900 Sobic003G074900--Sobic003G016300 Sobic001G219800 Sobic001G219800 Sobic003G074900--Sobic001G219800 Sobic007G141100 Sobic007G141100 Sobic003G074900--Sobic007G141100 Sobic009G001900 Sobic009G001900 Sobic003G074900--Sobic009G001900 Sobic006G203900--Sobic008G136800 Sobic006G203900--Sobic009G211900 Sobic001G035400 Sobic001G035400 Sobic006G203900--Sobic001G035400 Sobic006G203900--Sobic001G073600 Sobic004G138300 Sobic004G138300 Sobic006G203900--Sobic004G138300 Sobic006G203900--Sobic006G124300 Sobic006G203900--Sobic003G135600 Sobic006G203900--Sobic009G001900 Sobic007G013900 Sobic007G013900 Sobic006G203900--Sobic007G013900 Sobic002G217500--Sobic003G016300 Sobic002G352200 Sobic002G352200 Sobic002G217500--Sobic002G352200 Sobic002G255400 Sobic002G255400 Sobic002G217500--Sobic002G255400 Sobic006G153200 Sobic006G153200 Sobic002G217500--Sobic006G153200 Sobic002G217500--Sobic001G219800 Sobic002G217500--Sobic008G018300 Sobic003G260600 Sobic003G260600 Sobic002G217500--Sobic003G260600 Sobic007G023400 Sobic007G023400 Sobic002G217500--Sobic007G023400 Sobic009G218000 Sobic009G218000 Sobic002G217500--Sobic009G218000 Sobic003G016300--Sobic002G352200 Sobic003G016300--Sobic002G217500 Sobic003G016300--Sobic001G192700 Sobic003G016300--Sobic001G219800 Sobic003G016300--Sobic008G018300 Sobic003G016300--Sobic006G203900 Sobic003G016300--Sobic002G255400 Sobic003G016300--Sobic009G211900 Sobic002G420600 Sobic002G420600 Sobic003G016300--Sobic002G420600 Sobic001G192700--Sobic001G219800 Sobic001G192700--Sobic003G016300 Sobic001G352800 Sobic001G352800 Sobic001G192700--Sobic001G352800 Sobic002G232400 Sobic002G232400 Sobic001G192700--Sobic002G232400 Sobic001G135200 Sobic001G135200 Sobic001G192700--Sobic001G135200 Sobic001G348000 Sobic001G348000 Sobic001G192700--Sobic001G348000 Sobic004G117400 Sobic004G117400 Sobic001G192700--Sobic004G117400 Sobic001G091701 Sobic001G091701 Sobic001G192700--Sobic001G091701 Sobic001G192700--Sobic002G387800 Sobic010G277000 Sobic010G277000 Sobic008G084100--Sobic010G277000 Sobic008G084100--Sobic001G035400 Sobic003G238500 Sobic003G238500 Sobic008G084100--Sobic003G238500 Sobic008G084100--Sobic001G073600 Sobic007G048700 Sobic007G048700 Sobic008G084100--Sobic007G048700 Sobic001G370700 Sobic001G370700 Sobic008G084100--Sobic001G370700 Sobic001G413100 Sobic001G413100 Sobic008G084100--Sobic001G413100 Sobic008G084100--Sobic002G232400 Sobic008G084100--Sobic006G203900 Sobic006G124300--Sobic009G211900 Sobic006G124300--Sobic006G203900 Sobic006G124300--Sobic008G136800 Sobic006G124300--Sobic004G260200 Sobic005G091700 Sobic005G091700 Sobic006G124300--Sobic005G091700 Sobic001G030300 Sobic001G030300 Sobic006G124300--Sobic001G030300 Sobic006G124300--Sobic003G135600 Sobic006G124300--Sobic003G074900 Sobic001G350600 Sobic001G350600 Sobic006G124300--Sobic001G350600
Octagon: transcription factors


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