Gene annotation
Transcriptome id Sobic.001G192700.1,Sobic.001G192700.2
Synonym Sb01g016960
Functional annotation major facilitator superfamily domain-containing protein 5, putative, expressed
UniProt A0A1B6QJT6 , C5WVC4
Pfam PF05631
Panther DB PTHR23516 PTHR23516:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015689molybdate ion transport GO:0015098molybdate ion transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT1G64650 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os10g37520.1 : major facilitator superfamily domain-containing protein 5, putative, expressed
MaizeGDB (Corn) Zm00025a000207 , Zm00025a006281 , Zm00025a053528
Brachypodium KQJ97484 , KQK24017
Barley HORVU4Hr1G088860.1 , HORVU4Hr1G088860.2 , HORVU1Hr1G048360.4 , HORVU1Hr1G048360.5 , HORVU1Hr1G048360.2 , HORVU1Hr1G048360.1 , HORVU1Hr1G048360.3 , HORVU4Hr1G088860.3
Wheat TraesCS1A02G182400 , TraesCS1A02G182400 , TraesCSU02G115200 , TraesCS4D02G333900 , TraesCS4B02G399200 , TraesCS1D02G185600 , TraesCS1D02G185600 , TraesCS1B02G198500 , TraesCS1B02G198500 , TraesCS3A02G472400 , TraesCS3A02G472400 , TraesCS3A02G472400
Populus PNT53428


JBrowse

Open New Page


cDNA sequences
Sobic.001G192700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G219800 methyltransferase, putative, expressed -
2 Sobic.003G016300 SFT2, putative, expressed -
3 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
4 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -
5 Sobic.001G135200 OB-fold nucleic acid binding domain containing protein, putative, expressed K15365: RecQ-mediated genome instability protein 2
6 Sobic.001G348000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
7 Sobic.004G117400 expressed protein -
8 Sobic.001G091701 - -
9 Sobic.002G387800 - K12456: anaphase-promoting complex subunit 13
10 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
11 Sobic.005G210500 - K10901: BLM, RECQL3, bloom syndrome protein
12 Sobic.002G153400 meiotic coiled-coil protein 7, putative, expressed -
13 Sobic.006G271000 mis12 protein, expressed -
14 Sobic.001G126800 WD domain, G-beta repeat domain containing protein, expressed K11790: DTL, CDT2, denticleless
15 Sobic.003G418400 expressed protein -
16 Sobic.010G188900 PPR repeat domain containing protein, putative, expressed -
17 Sobic.003G075200 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
18 Sobic.004G062600 OsFBX154 - F-box domain containing protein, expressed -
19 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
20 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit


Gene co-expression network
sample Sobic001G192700 Sobic001G192700 Sobic001G219800 Sobic001G219800 Sobic001G192700--Sobic001G219800 Sobic003G016300 Sobic003G016300 Sobic001G192700--Sobic003G016300 Sobic001G352800 Sobic001G352800 Sobic001G192700--Sobic001G352800 Sobic002G232400 Sobic002G232400 Sobic001G192700--Sobic002G232400 Sobic001G135200 Sobic001G135200 Sobic001G192700--Sobic001G135200 Sobic001G348000 Sobic001G348000 Sobic001G192700--Sobic001G348000 Sobic004G117400 Sobic004G117400 Sobic001G192700--Sobic004G117400 Sobic001G091701 Sobic001G091701 Sobic001G192700--Sobic001G091701 Sobic002G387800 Sobic002G387800 Sobic001G192700--Sobic002G387800 Sobic001G219800--Sobic001G352800 Sobic001G219800--Sobic001G192700 Sobic001G219800--Sobic003G016300 Sobic002G255400 Sobic002G255400 Sobic001G219800--Sobic002G255400 Sobic002G217500 Sobic002G217500 Sobic001G219800--Sobic002G217500 Sobic003G074900 Sobic003G074900 Sobic001G219800--Sobic003G074900 Sobic002G420600 Sobic002G420600 Sobic001G219800--Sobic002G420600 Sobic002G352200 Sobic002G352200 Sobic001G219800--Sobic002G352200 Sobic003G075200 Sobic003G075200 Sobic001G219800--Sobic003G075200 Sobic003G016300--Sobic002G352200 Sobic003G016300--Sobic002G217500 Sobic003G016300--Sobic001G192700 Sobic003G016300--Sobic001G219800 Sobic008G018300 Sobic008G018300 Sobic003G016300--Sobic008G018300 Sobic006G203900 Sobic006G203900 Sobic003G016300--Sobic006G203900 Sobic003G016300--Sobic002G255400 Sobic009G211900 Sobic009G211900 Sobic003G016300--Sobic009G211900 Sobic003G016300--Sobic002G420600 Sobic001G352800--Sobic001G219800 Sobic001G352800--Sobic002G232400 Sobic001G352800--Sobic002G255400 Sobic003G260600 Sobic003G260600 Sobic001G352800--Sobic003G260600 Sobic001G352800--Sobic003G075200 Sobic003G085500 Sobic003G085500 Sobic001G352800--Sobic003G085500 Sobic002G090500 Sobic002G090500 Sobic001G352800--Sobic002G090500 Sobic001G352800--Sobic001G192700 Sobic001G126800 Sobic001G126800 Sobic001G352800--Sobic001G126800 Sobic002G153000 Sobic002G153000 Sobic002G232400--Sobic002G153000 Sobic002G232400--Sobic002G090500 Sobic002G232400--Sobic001G352800 Sobic002G232400--Sobic001G192700 Sobic002G268700 Sobic002G268700 Sobic002G232400--Sobic002G268700 Sobic010G002800 Sobic010G002800 Sobic002G232400--Sobic010G002800 Sobic004G218600 Sobic004G218600 Sobic002G232400--Sobic004G218600 Sobic008G084100 Sobic008G084100 Sobic002G232400--Sobic008G084100 Sobic010G018500 Sobic010G018500 Sobic002G232400--Sobic010G018500 Sobic003G044700 Sobic003G044700 Sobic001G135200--Sobic003G044700 Sobic001G135200--Sobic001G192700 Sobic001G135200--Sobic003G016300 Sobic004G261800 Sobic004G261800 Sobic001G135200--Sobic004G261800 Sobic001G135200--Sobic002G352200 Sobic004G100100 Sobic004G100100 Sobic001G135200--Sobic004G100100 Sobic009G244900 Sobic009G244900 Sobic001G135200--Sobic009G244900 Sobic005G185200 Sobic005G185200 Sobic001G135200--Sobic005G185200 Sobic006G271000 Sobic006G271000 Sobic001G135200--Sobic006G271000 Sobic001G348000--Sobic002G268700 Sobic001G348000--Sobic001G192700 Sobic007G048700 Sobic007G048700 Sobic001G348000--Sobic007G048700 Sobic008G132200 Sobic008G132200 Sobic001G348000--Sobic008G132200 Sobic001G347700 Sobic001G347700 Sobic001G348000--Sobic001G347700 Sobic005G210500 Sobic005G210500 Sobic001G348000--Sobic005G210500 Sobic001G348000--Sobic002G232400 Sobic001G348000--Sobic006G271000 Sobic001G286100 Sobic001G286100 Sobic001G348000--Sobic001G286100 Sobic009G125800 Sobic009G125800 Sobic004G117400--Sobic009G125800 Sobic009G214500 Sobic009G214500 Sobic004G117400--Sobic009G214500 Sobic009G131200 Sobic009G131200 Sobic004G117400--Sobic009G131200 Sobic004G117400--Sobic005G210500 Sobic002G322700 Sobic002G322700 Sobic004G117400--Sobic002G322700 Sobic010G009700 Sobic010G009700 Sobic004G117400--Sobic010G009700 Sobic010G038200 Sobic010G038200 Sobic004G117400--Sobic010G038200 Sobic009G136000 Sobic009G136000 Sobic004G117400--Sobic009G136000 Sobic004G117400--Sobic001G192700 Sobic003G217800 Sobic003G217800 Sobic001G091701--Sobic003G217800 Sobic004G062600 Sobic004G062600 Sobic001G091701--Sobic004G062600 Sobic005G048600 Sobic005G048600 Sobic001G091701--Sobic005G048600 Sobic003G293400 Sobic003G293400 Sobic001G091701--Sobic003G293400 Sobic009G220700 Sobic009G220700 Sobic001G091701--Sobic009G220700 Sobic003G423700 Sobic003G423700 Sobic001G091701--Sobic003G423700 Sobic010G182000 Sobic010G182000 Sobic001G091701--Sobic010G182000 Sobic007G102300 Sobic007G102300 Sobic001G091701--Sobic007G102300 Sobic001G091701--Sobic001G352800 Sobic002G387800--Sobic009G211900 Sobic009G206600 Sobic009G206600 Sobic002G387800--Sobic009G206600 Sobic002G387800--Sobic003G074900 Sobic002G387800--Sobic006G203900 Sobic002G387800--Sobic002G217500 Sobic002G387800--Sobic003G016300 Sobic002G387800--Sobic001G192700 Sobic002G387800--Sobic008G084100 Sobic006G124300 Sobic006G124300 Sobic002G387800--Sobic006G124300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.